RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 LSM10Q969L4 123 aaKnown RBP0.03□□□□□ -2.4
SSB-207ENST00000465871 NSD1Q96L73 2696 aaPredicted RBP0.02□□□□□ -2.41
SSB-207ENST00000465871 ZNF292O60281 2723 aa0.02□□□□□ -2.41
SSB-207ENST00000465871 TRAV22A0A0B4J277 110 aa0.02□□□□□ -2.41
SSB-207ENST00000465871 M0R3E3 92 aa0.02□□□□□ -2.41
SSB-207ENST00000465871 CCL18P55774 89 aa0.02□□□□□ -2.41
SSB-207ENST00000465871 SMIM4Q8WVI0 70 aa0.02□□□□□ -2.41
SSB-207ENST00000465871 CNFNQ9BYD5 112 aa0.02□□□□□ -2.41
SSB-207ENST00000465871 CYP4F30PQ9H0H9 118 aa0.02□□□□□ -2.41
SSB-207ENST00000465871 RERGLQ9H628 205 aa0.02□□□□□ -2.41
SSB-207ENST00000465871 NAA60Q9H7X0 242 aa0.02□□□□□ -2.41
SSB-207ENST00000465871 SERP1Q9Y6X1 66 aa0.02□□□□□ -2.41
SSB-207ENST00000465871 V9GYH0 126 aa0.02□□□□□ -2.41
SSB-207ENST00000465871 GRIN2AQ12879 1464 aa0.02□□□□□ -2.41
SSB-207ENST00000465871 WNK2Q9Y3S1 2297 aa0.02□□□□□ -2.41
SSB-207ENST00000465871 PTPRQQ9UMZ3 2332 aa0.02□□□□□ -2.41
SSB-207ENST00000465871 SPEF2Q9C093 1822 aa0.01□□□□□ -2.41
SSB-207ENST00000465871 MYH9P35579 1960 aaKnown RBP0.01□□□□□ -2.41
SSB-207ENST00000465871 AKAP6Q13023 2319 aa0.01□□□□□ -2.41
SSB-207ENST00000465871 ABCA2Q9BZC7 2435 aa0.01□□□□□ -2.41
SSB-207ENST00000465871 NDUFA2O43678 99 aa0.01□□□□□ -2.41
SSB-207ENST00000465871 S100A3P33764 101 aa0.01□□□□□ -2.41
SSB-207ENST00000465871 S100A12P80511 92 aa0.01□□□□□ -2.41
SSB-207ENST00000465871 C12orf73Q69YU5 71 aa0.01□□□□□ -2.41
SSB-207ENST00000465871 Q8N8P6 123 aa0.01□□□□□ -2.41
SSB-207ENST00000465871 SNRNP25Q9BV90 132 aaKnown RBP0.01□□□□□ -2.41
SSB-207ENST00000465871 FLNCQ14315 2725 aa0.01□□□□□ -2.41
SSB-207ENST00000465871 NCOR1O75376 2440 aa0.01□□□□□ -2.41
SSB-207ENST00000465871 SPAARA0A1B0GVQ0 90 aa0□□□□□ -2.41
SSB-207ENST00000465871 MIF4GDA9UHW6 222 aaKnown RBP0□□□□□ -2.41
SSB-207ENST00000465871 ZNF609O15014 1411 aa0□□□□□ -2.41
SSB-207ENST00000465871 MYOM3Q5VTT5 1437 aa0□□□□□ -2.41
SSB-207ENST00000465871 FAM208BQ5VWN6 2430 aa0□□□□□ -2.41
SSB-207ENST00000465871 Q6AWC8 147 aa0□□□□□ -2.41
SSB-207ENST00000465871 IFT172Q9UG01 1749 aa0□□□□□ -2.41
SSB-207ENST00000465871 LENEPQ9Y5L5 61 aa0□□□□□ -2.41
SSB-207ENST00000465871 SPCS1Q9Y6A9 102 aa0□□□□□ -2.41
SSB-207ENST00000465871 PLCE1Q9P212 2302 aa-0.01□□□□□ -2.41
SSB-207ENST00000465871 PI4KAP42356 2102 aa-0.01□□□□□ -2.41
SSB-207ENST00000465871 SIPA1L3O60292 1781 aaPredicted RBP-0.01□□□□□ -2.41
SSB-207ENST00000465871 LRRC37A3O60309 1634 aa-0.01□□□□□ -2.41
SSB-207ENST00000465871 CFTRP13569 1480 aa-0.01□□□□□ -2.41
SSB-207ENST00000465871 MRC1P22897 1456 aa-0.01□□□□□ -2.41
SSB-207ENST00000465871 C10orf142B7Z368 130 aa-0.01□□□□□ -2.41
SSB-207ENST00000465871 BCE1O60756 84 aa-0.01□□□□□ -2.41
SSB-207ENST00000465871 HMGN1P05114 100 aa-0.01□□□□□ -2.41
SSB-207ENST00000465871 Q56UQ5 140 aa-0.01□□□□□ -2.41
SSB-207ENST00000465871 TMEM170BQ5T4T1 132 aa-0.01□□□□□ -2.41
SSB-207ENST00000465871 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.01□□□□□ -2.41
SSB-207ENST00000465871 TSLPQ969D9 159 aa-0.01□□□□□ -2.41
SSB-207ENST00000465871 PPP3R2Q96LZ3 170 aa-0.01□□□□□ -2.41
SSB-207ENST00000465871 C2CD3Q4AC94 2353 aa-0.01□□□□□ -2.41
SSB-207ENST00000465871 CSMD3Q7Z407 3707 aa-0.01□□□□□ -2.41
SSB-207ENST00000465871 NWD2Q9ULI1 1742 aa-0.01□□□□□ -2.41
SSB-207ENST00000465871 BICRAQ9NZM4 1560 aa-0.02□□□□□ -2.41
SSB-207ENST00000465871 PKDREJQ9NTG1 2253 aa-0.02□□□□□ -2.41
SSB-207ENST00000465871 DOPEY2Q9Y3R5 2298 aa-0.02□□□□□ -2.41
SSB-207ENST00000465871 PPIP5K1Q6PFW1 1433 aa-0.02□□□□□ -2.41
SSB-207ENST00000465871 MYH8P13535 1937 aa-0.02□□□□□ -2.41
SSB-207ENST00000465871 FXYD6-FXYD2A0A087WZ82 144 aa-0.02□□□□□ -2.41
SSB-207ENST00000465871 APOC2P02655 101 aa-0.02□□□□□ -2.41
SSB-207ENST00000465871 CATR1Q13166 79 aa-0.02□□□□□ -2.41
SSB-207ENST00000465871 WFDC2Q14508 124 aa-0.02□□□□□ -2.41
SSB-207ENST00000465871 DEFB109BQ30KR1 87 aa-0.02□□□□□ -2.41
SSB-207ENST00000465871 Q8IZM0 81 aa-0.02□□□□□ -2.41
SSB-207ENST00000465871 ARAP2Q8WZ64 1704 aa-0.02□□□□□ -2.41
SSB-207ENST00000465871 NAIPQ13075 1403 aa-0.03□□□□□ -2.41
SSB-207ENST00000465871 KMT2AQ03164 3969 aa-0.03□□□□□ -2.41
SSB-207ENST00000465871 FLNAP21333 2647 aaKnown RBP-0.03□□□□□ -2.41
SSB-207ENST00000465871 F8VRH5 84 aa-0.03□□□□□ -2.41
SSB-207ENST00000465871 K7EP13 123 aa-0.03□□□□□ -2.41
SSB-207ENST00000465871 IFNGP01579 166 aa-0.03□□□□□ -2.41
SSB-207ENST00000465871 BAGE2Q86Y30 109 aa-0.03□□□□□ -2.41
SSB-207ENST00000465871 DYNLRB1Q9NP97 96 aa-0.03□□□□□ -2.41
SSB-207ENST00000465871 ERCC6L2Q5T890 1561 aa-0.03□□□□□ -2.41
SSB-207ENST00000465871 TRBV7-3A0A075B6L6 115 aa-0.04□□□□□ -2.42
SSB-207ENST00000465871 LOC100130705A0A1B0GUX0 176 aa-0.04□□□□□ -2.42
SSB-207ENST00000465871 APOC3P02656 99 aa-0.04□□□□□ -2.42
SSB-207ENST00000465871 AKAIN1P0CW23 69 aa-0.04□□□□□ -2.42
SSB-207ENST00000465871 FGF7P21781 194 aa-0.04□□□□□ -2.42
SSB-207ENST00000465871 COX17Q14061 63 aa-0.04□□□□□ -2.42
SSB-207ENST00000465871 Q6JHZ5 121 aa-0.04□□□□□ -2.42
SSB-207ENST00000465871 C8orf59Q8N0T1 100 aaPredicted RBP-0.04□□□□□ -2.42
SSB-207ENST00000465871 MGST2Q99735 147 aa-0.04□□□□□ -2.42
SSB-207ENST00000465871 NDUFA4L2Q9NRX3 87 aa-0.04□□□□□ -2.42
SSB-207ENST00000465871 PTPN13Q12923 2485 aa-0.04□□□□□ -2.42
SSB-207ENST00000465871 PXDNQ92626 1479 aa-0.04□□□□□ -2.42
SSB-207ENST00000465871 UQCR11O14957 56 aa-0.05□□□□□ -2.42
SSB-207ENST00000465871 SNAPC5O75971 98 aa-0.05□□□□□ -2.42
SSB-207ENST00000465871 BTG2P78543 158 aa-0.05□□□□□ -2.42
SSB-207ENST00000465871 DCDP81605 110 aaKnown RBP-0.05□□□□□ -2.42
SSB-207ENST00000465871 SPANXDQ9BXN6 97 aa-0.05□□□□□ -2.42
SSB-207ENST00000465871 TP53AIP1Q9HCN2 124 aa-0.05□□□□□ -2.42
SSB-207ENST00000465871 PRDM2Q13029 1718 aa-0.05□□□□□ -2.42
SSB-207ENST00000465871 DOCK1Q14185 1865 aa-0.05□□□□□ -2.42
SSB-207ENST00000465871 NHSL1Q5SYE7 1610 aa-0.05□□□□□ -2.42
SSB-207ENST00000465871 IGLC7A0M8Q6 106 aa-0.06□□□□□ -2.42
SSB-207ENST00000465871 TNFP01375 233 aa-0.06□□□□□ -2.42
SSB-207ENST00000465871 TPPP2P59282 170 aa-0.06□□□□□ -2.42
SSB-207ENST00000465871 MRPL54Q6P161 138 aaKnown RBP-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms