RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 FER1L6-AS1Q8NA97 138 aa9.17□□□□□ -0.94
MCF2L-220ENST00000464800 IGKV2-24A0A0C4DH68 120 aa9.16□□□□□ -0.94
MCF2L-220ENST00000464800 KANTRA0A1W2PQU2 76 aa9.16□□□□□ -0.94
MCF2L-220ENST00000464800 HMSDA8MTL9 139 aa9.16□□□□□ -0.94
MCF2L-220ENST00000464800 BCL2L11O43521 198 aa9.16□□□□□ -0.94
MCF2L-220ENST00000464800 RPS10P46783 165 aaKnown RBP9.16□□□□□ -0.94
MCF2L-220ENST00000464800 SULT1A2P50226 295 aa9.16□□□□□ -0.94
MCF2L-220ENST00000464800 NKX2-5P52952 324 aaPredicted RBP9.16□□□□□ -0.94
MCF2L-220ENST00000464800 CCL20P78556 96 aa9.16□□□□□ -0.94
MCF2L-220ENST00000464800 CFAP161Q6P656 301 aa9.16□□□□□ -0.94
MCF2L-220ENST00000464800 REG3GQ6UW15 175 aa9.16□□□□□ -0.94
MCF2L-220ENST00000464800 C15orf56Q8N910 161 aa9.16□□□□□ -0.94
MCF2L-220ENST00000464800 OR2D3Q8NGH3 330 aa9.16□□□□□ -0.94
MCF2L-220ENST00000464800 GNG13Q9P2W3 67 aa9.16□□□□□ -0.94
MCF2L-220ENST00000464800 UBE2L6O14933 153 aa9.15□□□□□ -0.94
MCF2L-220ENST00000464800 RPS20P60866 119 aaKnown RBP9.15□□□□□ -0.94
MCF2L-220ENST00000464800 CACNG7P62955 275 aa9.15□□□□□ -0.94
MCF2L-220ENST00000464800 CENPWQ5EE01 88 aa9.15□□□□□ -0.94
MCF2L-220ENST00000464800 STPG4Q8N801 248 aa9.15□□□□□ -0.94
MCF2L-220ENST00000464800 C11orf52Q96A22 123 aa9.15□□□□□ -0.94
MCF2L-220ENST00000464800 MANBALQ9NQG1 85 aa9.15□□□□□ -0.94
MCF2L-220ENST00000464800 EIF5AP63241 154 aaKnown RBP9.14□□□□□ -0.95
MCF2L-220ENST00000464800 HIGD2BQ4VC39 106 aa9.14□□□□□ -0.95
MCF2L-220ENST00000464800 RASL11AQ6T310 242 aa9.14□□□□□ -0.95
MCF2L-220ENST00000464800 SPINK6Q6UWN8 80 aa9.14□□□□□ -0.95
MCF2L-220ENST00000464800 TCTE3Q8IZS6 198 aa9.14□□□□□ -0.95
MCF2L-220ENST00000464800 PRSS3P2Q8NHM4 247 aa9.14□□□□□ -0.95
MCF2L-220ENST00000464800 LYPD6BQ8NI32 183 aa9.14□□□□□ -0.95
MCF2L-220ENST00000464800 PGLYRP4Q96LB8 373 aa9.14□□□□□ -0.95
MCF2L-220ENST00000464800 RAB19A4D1S5 217 aa9.13□□□□□ -0.95
MCF2L-220ENST00000464800 C19orf71A6NCJ1 209 aa9.13□□□□□ -0.95
MCF2L-220ENST00000464800 GAGE12HA6NDE8 117 aa9.13□□□□□ -0.95
MCF2L-220ENST00000464800 GAS8-AS1O95177 125 aa9.13□□□□□ -0.95
MCF2L-220ENST00000464800 KRTAP10-8P60410 259 aa9.13□□□□□ -0.95
MCF2L-220ENST00000464800 NIT2Q9NQR4 276 aa9.13□□□□□ -0.95
MCF2L-220ENST00000464800 TRAV1-1A0A0B4J248 108 aa9.12□□□□□ -0.95
MCF2L-220ENST00000464800 F2Z2F3 143 aa9.12□□□□□ -0.95
MCF2L-220ENST00000464800 AMTP48728 403 aa9.12□□□□□ -0.95
MCF2L-220ENST00000464800 GNG4P50150 75 aa9.12□□□□□ -0.95
MCF2L-220ENST00000464800 A0A096LNI7 61 aa9.11□□□□□ -0.95
MCF2L-220ENST00000464800 IGKV3OR2-268A0A0C4DH90 116 aa9.11□□□□□ -0.95
MCF2L-220ENST00000464800 XKRY2A2RUG3 117 aa9.11□□□□□ -0.95
MCF2L-220ENST00000464800 IFNA1P01562 189 aa9.11□□□□□ -0.95
MCF2L-220ENST00000464800 TRGC1P0CF51 173 aa9.11□□□□□ -0.95
MCF2L-220ENST00000464800 NTF3P20783 257 aa9.11□□□□□ -0.95
MCF2L-220ENST00000464800 LYZL1Q6UWQ5 148 aa9.11□□□□□ -0.95
MCF2L-220ENST00000464800 SMIM12Q96EX1 92 aa9.11□□□□□ -0.95
MCF2L-220ENST00000464800 GVQW2A0A096LPI5 108 aaPredicted RBP9.1□□□□□ -0.95
MCF2L-220ENST00000464800 COTL1Q14019 142 aa9.1□□□□□ -0.95
MCF2L-220ENST00000464800 LINC00474Q9P2X8 69 aa9.1□□□□□ -0.95
MCF2L-220ENST00000464800 C9orf62Q8N4C0 152 aa9.09□□□□□ -0.95
MCF2L-220ENST00000464800 PKIGQ9Y2B9 76 aa9.09□□□□□ -0.95
MCF2L-220ENST00000464800 TRBV20OR9-2A0A075B6H5 130 aa9.08□□□□□ -0.96
MCF2L-220ENST00000464800 TEX46H3BTG2 121 aa9.08□□□□□ -0.96
MCF2L-220ENST00000464800 PDE6DO43924 150 aa9.08□□□□□ -0.96
MCF2L-220ENST00000464800 MEF2BQ02080 365 aaPredicted RBP9.08□□□□□ -0.96
MCF2L-220ENST00000464800 Q6ZRP5 223 aa9.08□□□□□ -0.96
MCF2L-220ENST00000464800 CHCHD10Q8WYQ3 142 aaPredicted RBP9.08□□□□□ -0.96
MCF2L-220ENST00000464800 MED9Q9NWA0 146 aa9.08□□□□□ -0.96
MCF2L-220ENST00000464800 TWIST1Q15672 202 aa9.07□□□□□ -0.96
MCF2L-220ENST00000464800 AMMECR1LQ6DCA0 310 aa9.07□□□□□ -0.96
MCF2L-220ENST00000464800 NUDT10Q8NFP7 164 aa9.07□□□□□ -0.96
MCF2L-220ENST00000464800 NUDT11Q96G61 164 aa9.07□□□□□ -0.96
MCF2L-220ENST00000464800 BIN3Q9NQY0 253 aa9.07□□□□□ -0.96
MCF2L-220ENST00000464800 CTRLP40313 264 aa9.06□□□□□ -0.96
MCF2L-220ENST00000464800 SRSF9Q13242 221 aaKnown RBP eCLIP9.06□□□□□ -0.96
MCF2L-220ENST00000464800 EIF5AL1Q6IS14 154 aaKnown RBP9.06□□□□□ -0.96
MCF2L-220ENST00000464800 GATD1Q8NB37 220 aa9.06□□□□□ -0.96
MCF2L-220ENST00000464800 TRAV26-2A0A0B4J265 109 aa9.05□□□□□ -0.96
MCF2L-220ENST00000464800 CNFNQ9BYD5 112 aa9.05□□□□□ -0.96
MCF2L-220ENST00000464800 FOXI1Q12951 378 aa9.04□□□□□ -0.96
MCF2L-220ENST00000464800 CARD19Q96LW7 228 aa9.04□□□□□ -0.96
MCF2L-220ENST00000464800 BCL2P10415 239 aa9.03□□□□□ -0.96
MCF2L-220ENST00000464800 RNASEKQ6P5S7 137 aaKnown RBP9.03□□□□□ -0.96
MCF2L-220ENST00000464800 RPL39LQ96EH5 51 aaKnown RBP9.03□□□□□ -0.96
MCF2L-220ENST00000464800 RNASE7Q9H1E1 156 aaKnown RBP9.03□□□□□ -0.96
MCF2L-220ENST00000464800 RPP21Q9H633 154 aaKnown RBP9.03□□□□□ -0.96
MCF2L-220ENST00000464800 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.02□□□□□ -0.97
MCF2L-220ENST00000464800 IGKV2-29A2NJV5 120 aaPredicted RBP9.02□□□□□ -0.97
MCF2L-220ENST00000464800 FAM231BA6NCW3 169 aa9.01□□□□□ -0.97
MCF2L-220ENST00000464800 H7C423 109 aa9.01□□□□□ -0.97
MCF2L-220ENST00000464800 K7EN84 100 aa9.01□□□□□ -0.97
MCF2L-220ENST00000464800 NCR2O95944 276 aa9.01□□□□□ -0.97
MCF2L-220ENST00000464800 APCSP02743 223 aa9.01□□□□□ -0.97
MCF2L-220ENST00000464800 XCL1P47992 114 aa9.01□□□□□ -0.97
MCF2L-220ENST00000464800 FOXA3P55318 350 aaPredicted RBP9.01□□□□□ -0.97
MCF2L-220ENST00000464800 SMIM15Q7Z3B0 74 aa9.01□□□□□ -0.97
MCF2L-220ENST00000464800 OCC1Q8TAD7 63 aa9.01□□□□□ -0.97
MCF2L-220ENST00000464800 LINC00526Q96FQ7 95 aa9.01□□□□□ -0.97
MCF2L-220ENST00000464800 IGHV1-58A0A0C4DH39 117 aa9□□□□□ -0.97
MCF2L-220ENST00000464800 FGF6P10767 208 aa9□□□□□ -0.97
MCF2L-220ENST00000464800 OR5A1Q8NGJ0 315 aa9□□□□□ -0.97
MCF2L-220ENST00000464800 SDHAF1A6NFY7 115 aa8.99□□□□□ -0.97
MCF2L-220ENST00000464800 ZNF25P17030 456 aaPredicted RBP8.99□□□□□ -0.97
MCF2L-220ENST00000464800 TAGLN2P37802 199 aaKnown RBP8.99□□□□□ -0.97
MCF2L-220ENST00000464800 SYCNQ0VAF6 134 aa8.99□□□□□ -0.97
MCF2L-220ENST00000464800 TEX261Q6UWH6 196 aa8.99□□□□□ -0.97
MCF2L-220ENST00000464800 ZNF561-AS1K7EIQ3 104 aa8.98□□□□□ -0.97
MCF2L-220ENST00000464800 CCL25O15444 150 aa8.98□□□□□ -0.97
MCF2L-220ENST00000464800 PTTG1IPP53801 180 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms