RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 TGIF2-C20orf24A0A0A6YYL0 155 aa11.49□□□□□ -0.57
VPS52-215ENST00000464425 D6R8Y8 96 aa11.49□□□□□ -0.57
VPS52-215ENST00000464425 SMKR1H3BMG3 65 aa11.49□□□□□ -0.57
VPS52-215ENST00000464425 PHOX2AO14813 284 aa11.49□□□□□ -0.57
VPS52-215ENST00000464425 NCR2O95944 276 aa11.49□□□□□ -0.57
VPS52-215ENST00000464425 NFE4Q86UQ8 179 aa11.49□□□□□ -0.57
VPS52-215ENST00000464425 ORMDL3Q8N138 153 aa11.49□□□□□ -0.57
VPS52-215ENST00000464425 C20orf78Q9BR46 151 aa11.49□□□□□ -0.57
VPS52-215ENST00000464425 DNAH11Q96DT5 4516 aa11.49□□□□□ -0.57
VPS52-215ENST00000464425 TRBV6-8A0A0A6YYG3 113 aa11.48□□□□□ -0.57
VPS52-215ENST00000464425 SDHAF1A6NFY7 115 aa11.48□□□□□ -0.57
VPS52-215ENST00000464425 MT-ND6P03923 174 aa11.48□□□□□ -0.57
VPS52-215ENST00000464425 POLR2KP53803 58 aaKnown RBP11.48□□□□□ -0.57
VPS52-215ENST00000464425 LAMTOR2Q9Y2Q5 125 aa11.48□□□□□ -0.57
VPS52-215ENST00000464425 DYNC1H1Q14204 4646 aaKnown RBP11.47□□□□□ -0.57
VPS52-215ENST00000464425 TRBV27A0A0K0K1C4 114 aa11.47□□□□□ -0.57
VPS52-215ENST00000464425 IBA57-AS1B1ANH7 110 aa11.47□□□□□ -0.57
VPS52-215ENST00000464425 TNFRSF6BO95407 300 aa11.47□□□□□ -0.57
VPS52-215ENST00000464425 APCSP02743 223 aa11.47□□□□□ -0.57
VPS52-215ENST00000464425 SUMO2P61956 95 aaKnown RBP11.47□□□□□ -0.57
VPS52-215ENST00000464425 NTM-AS1Q6ZSK4 140 aa11.47□□□□□ -0.57
VPS52-215ENST00000464425 CBLN2Q8IUK8 224 aa11.47□□□□□ -0.57
VPS52-215ENST00000464425 TMEM70Q9BUB7 260 aa11.47□□□□□ -0.57
VPS52-215ENST00000464425 I3L3M4 83 aa11.46□□□□□ -0.57
VPS52-215ENST00000464425 VCYO14598 125 aa11.46□□□□□ -0.57
VPS52-215ENST00000464425 RPL32P62910 135 aaKnown RBP11.46□□□□□ -0.57
VPS52-215ENST00000464425 PRELID3AQ96N28 172 aa11.46□□□□□ -0.57
VPS52-215ENST00000464425 Q9HAA7 133 aa11.46□□□□□ -0.57
VPS52-215ENST00000464425 PRSS47A8MTI9 375 aa11.45□□□□□ -0.58
VPS52-215ENST00000464425 S100A1P23297 94 aa11.45□□□□□ -0.58
VPS52-215ENST00000464425 COTL1Q14019 142 aa11.45□□□□□ -0.58
VPS52-215ENST00000464425 IQCJQ1A5X6 159 aa11.45□□□□□ -0.58
VPS52-215ENST00000464425 TRBV25-1A0A075B6N4 114 aa11.44□□□□□ -0.58
VPS52-215ENST00000464425 TMEM262E9PQX1 116 aa11.44□□□□□ -0.58
VPS52-215ENST00000464425 NPYP01303 97 aa11.44□□□□□ -0.58
VPS52-215ENST00000464425 PMCHP20382 165 aa11.44□□□□□ -0.58
VPS52-215ENST00000464425 SPATA12Q7Z6I5 190 aa11.44□□□□□ -0.58
VPS52-215ENST00000464425 NIT1Q86X76 327 aa11.44□□□□□ -0.58
VPS52-215ENST00000464425 MRPL18Q9H0U6 180 aaKnown RBP11.44□□□□□ -0.58
VPS52-215ENST00000464425 IGHV1-24A0A0C4DH33 117 aa11.43□□□□□ -0.58
VPS52-215ENST00000464425 TRAPPC1Q9Y5R8 145 aa11.43□□□□□ -0.58
VPS52-215ENST00000464425 A0A087WX48 190 aa11.42□□□□□ -0.58
VPS52-215ENST00000464425 C16orf90A8MZG2 172 aa11.41□□□□□ -0.58
VPS52-215ENST00000464425 PSCAO43653 123 aa11.41□□□□□ -0.58
VPS52-215ENST00000464425 ATP6V1G1O75348 118 aa11.41□□□□□ -0.58
VPS52-215ENST00000464425 TSHBP01222 138 aa11.41□□□□□ -0.58
VPS52-215ENST00000464425 KRTAP10-2P60368 255 aa11.41□□□□□ -0.58
VPS52-215ENST00000464425 PKIAP61925 76 aa11.41□□□□□ -0.58
VPS52-215ENST00000464425 FABP9Q0Z7S8 132 aa11.41□□□□□ -0.58
VPS52-215ENST00000464425 KIAA1644Q3SXP7 199 aa11.41□□□□□ -0.58
VPS52-215ENST00000464425 DEFB104AQ8WTQ1 72 aa11.41□□□□□ -0.58
VPS52-215ENST00000464425 KIR2DL4Q99706 377 aa11.41□□□□□ -0.58
VPS52-215ENST00000464425 CHCHD5Q9BSY4 110 aa11.41□□□□□ -0.58
VPS52-215ENST00000464425 CHCHD7Q9BUK0 85 aa11.41□□□□□ -0.58
VPS52-215ENST00000464425 SMIM2Q9BVW6 85 aa11.41□□□□□ -0.58
VPS52-215ENST00000464425 TCAPO15273 167 aa11.4□□□□□ -0.58
VPS52-215ENST00000464425 AMTP48728 403 aa11.4□□□□□ -0.58
VPS52-215ENST00000464425 TMEM243Q9BU79 118 aa11.4□□□□□ -0.58
VPS52-215ENST00000464425 KLK12Q9UKR0 248 aa11.4□□□□□ -0.58
VPS52-215ENST00000464425 A0A087WTM6 91 aa11.39□□□□□ -0.59
VPS52-215ENST00000464425 H7C423 109 aa11.39□□□□□ -0.59
VPS52-215ENST00000464425 EREGO14944 169 aa11.39□□□□□ -0.59
VPS52-215ENST00000464425 FUSP35637 526 aaKnown RBP eCLIP11.39□□□□□ -0.59
VPS52-215ENST00000464425 LAGE3Q14657 143 aa11.39□□□□□ -0.59
VPS52-215ENST00000464425 ALKBH7Q9BT30 221 aaPredicted RBP11.39□□□□□ -0.59
VPS52-215ENST00000464425 MAP1LC3AQ9H492 121 aa11.39□□□□□ -0.59
VPS52-215ENST00000464425 TRAV8-3A0A0A6YYJ7 113 aa11.38□□□□□ -0.59
VPS52-215ENST00000464425 COLCA2A8K830 154 aa11.38□□□□□ -0.59
VPS52-215ENST00000464425 ESDP10768 282 aa11.38□□□□□ -0.59
VPS52-215ENST00000464425 SCO1O75880 301 aa11.37□□□□□ -0.59
VPS52-215ENST00000464425 FCER1GP30273 86 aa11.37□□□□□ -0.59
VPS52-215ENST00000464425 GAGE6Q13070 117 aa11.37□□□□□ -0.59
VPS52-215ENST00000464425 MPV17L2Q567V2 206 aa11.37□□□□□ -0.59
VPS52-215ENST00000464425 UBE2WQ96B02 151 aa11.37□□□□□ -0.59
VPS52-215ENST00000464425 A0A1B0GUV1 79 aa11.36□□□□□ -0.59
VPS52-215ENST00000464425 K7EMI3 77 aa11.36□□□□□ -0.59
VPS52-215ENST00000464425 Q8N8P6 123 aa11.36□□□□□ -0.59
VPS52-215ENST00000464425 Q8N976 141 aa11.36□□□□□ -0.59
VPS52-215ENST00000464425 TM2D2Q9BX73 214 aa11.36□□□□□ -0.59
VPS52-215ENST00000464425 NXT2Q9NPJ8 142 aaKnown RBP11.36□□□□□ -0.59
VPS52-215ENST00000464425 KIAA1109Q2LD37 5005 aa11.36□□□□□ -0.59
VPS52-215ENST00000464425 LOC389332A0A1B0GUA5 103 aa11.35□□□□□ -0.59
VPS52-215ENST00000464425 UBE2L6O14933 153 aa11.35□□□□□ -0.59
VPS52-215ENST00000464425 LRCOL1A6NCL2 159 aa11.34□□□□□ -0.59
VPS52-215ENST00000464425 ANGP03950 147 aaKnown RBP11.34□□□□□ -0.59
VPS52-215ENST00000464425 RAB5AP20339 215 aa11.34□□□□□ -0.59
VPS52-215ENST00000464425 LRP1BQ9NZR2 4599 aa11.34□□□□□ -0.59
VPS52-215ENST00000464425 IGKV2D-24A0A075B6R9 120 aa11.33□□□□□ -0.6
VPS52-215ENST00000464425 RBX1P62877 108 aa11.33□□□□□ -0.6
VPS52-215ENST00000464425 PGPEP1Q9NXJ5 209 aa11.33□□□□□ -0.6
VPS52-215ENST00000464425 IFI27P40305 119 aaPredicted RBP11.32□□□□□ -0.6
VPS52-215ENST00000464425 C20orf203Q8NBC4 194 aa11.32□□□□□ -0.6
VPS52-215ENST00000464425 TMEM18Q96B42 140 aa11.32□□□□□ -0.6
VPS52-215ENST00000464425 RMI2Q96E14 147 aa11.32□□□□□ -0.6
VPS52-215ENST00000464425 DNAH5Q8TE73 4624 aa11.32□□□□□ -0.6
VPS52-215ENST00000464425 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.31□□□□□ -0.6
VPS52-215ENST00000464425 IGKV2-29A2NJV5 120 aaPredicted RBP11.31□□□□□ -0.6
VPS52-215ENST00000464425 LINC01546A6NGU7 62 aa11.31□□□□□ -0.6
VPS52-215ENST00000464425 ZNF25P17030 456 aaPredicted RBP11.31□□□□□ -0.6
VPS52-215ENST00000464425 SMAGPQ0VAQ4 97 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms