RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 LYPD6BQ8NI32 183 aa12.55□□□□□ -0.4
CCHCR1-210ENST00000464012 PGLYRP4Q96LB8 373 aa12.55□□□□□ -0.4
CCHCR1-210ENST00000464012 EIF5A2Q9GZV4 153 aaKnown RBP12.55□□□□□ -0.4
CCHCR1-210ENST00000464012 FOXA3P55318 350 aaPredicted RBP12.54□□□□□ -0.4
CCHCR1-210ENST00000464012 SMIM15Q7Z3B0 74 aa12.54□□□□□ -0.4
CCHCR1-210ENST00000464012 PLA2G1BP04054 148 aaKnown RBP12.53□□□□□ -0.4
CCHCR1-210ENST00000464012 PRSS1P07477 247 aa12.53□□□□□ -0.4
CCHCR1-210ENST00000464012 KRTAP26-1Q6PEX3 210 aa12.53□□□□□ -0.4
CCHCR1-210ENST00000464012 FAM231DQ6ZW35 169 aa12.53□□□□□ -0.4
CCHCR1-210ENST00000464012 RPL39LQ96EH5 51 aaKnown RBP12.53□□□□□ -0.4
CCHCR1-210ENST00000464012 SMIM7Q9BQ49 75 aa12.53□□□□□ -0.4
CCHCR1-210ENST00000464012 GFRA4Q9GZZ7 299 aa12.53□□□□□ -0.4
CCHCR1-210ENST00000464012 A8MWL6 223 aa12.52□□□□□ -0.41
CCHCR1-210ENST00000464012 CHAC1Q9BUX1 264 aa12.52□□□□□ -0.41
CCHCR1-210ENST00000464012 FLG2Q5D862 2391 aaPredicted RBP12.5□□□□□ -0.41
CCHCR1-210ENST00000464012 SRRM2Q9UQ35 2752 aaKnown RBP12.5□□□□□ -0.41
CCHCR1-210ENST00000464012 A0A1B0GUV1 79 aa12.5□□□□□ -0.41
CCHCR1-210ENST00000464012 CIRBP-AS1Q8TBR5 109 aa12.5□□□□□ -0.41
CCHCR1-210ENST00000464012 BORCS7Q96B45 105 aa12.5□□□□□ -0.41
CCHCR1-210ENST00000464012 FAM210AQ96ND0 272 aa12.5□□□□□ -0.41
CCHCR1-210ENST00000464012 ZNF727A8MUV8 499 aa12.49□□□□□ -0.41
CCHCR1-210ENST00000464012 TRAV8-4A0A0B4J246 113 aa12.48□□□□□ -0.41
CCHCR1-210ENST00000464012 IGKV3OR2-268A0A0C4DH90 116 aa12.48□□□□□ -0.41
CCHCR1-210ENST00000464012 CT83Q5H943 113 aa12.48□□□□□ -0.41
CCHCR1-210ENST00000464012 LINC01551Q86U37 167 aa12.48□□□□□ -0.41
CCHCR1-210ENST00000464012 SRP19P09132 144 aaKnown RBP12.47□□□□□ -0.41
CCHCR1-210ENST00000464012 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.46□□□□□ -0.41
CCHCR1-210ENST00000464012 hDV102S1A0JD36 115 aa12.46□□□□□ -0.41
CCHCR1-210ENST00000464012 IGKV2-29A2NJV5 120 aaPredicted RBP12.46□□□□□ -0.41
CCHCR1-210ENST00000464012 SDHAF1A6NFY7 115 aa12.46□□□□□ -0.41
CCHCR1-210ENST00000464012 APCSP02743 223 aa12.46□□□□□ -0.41
CCHCR1-210ENST00000464012 AMMECR1LQ6DCA0 310 aa12.46□□□□□ -0.41
CCHCR1-210ENST00000464012 DGAT2L7PQ6IED9 249 aa12.46□□□□□ -0.41
CCHCR1-210ENST00000464012 TEX261Q6UWH6 196 aa12.46□□□□□ -0.41
CCHCR1-210ENST00000464012 HIGD1CA8MV81 97 aa12.45□□□□□ -0.42
CCHCR1-210ENST00000464012 RNASEKQ6P5S7 137 aaKnown RBP12.45□□□□□ -0.42
CCHCR1-210ENST00000464012 C9orf163Q8N9P6 203 aa12.45□□□□□ -0.42
CCHCR1-210ENST00000464012 TSKUQ8WUA8 353 aa12.45□□□□□ -0.42
CCHCR1-210ENST00000464012 CLRN3Q8NCR9 226 aa12.44□□□□□ -0.42
CCHCR1-210ENST00000464012 A0A1B0GUT8 65 aa12.43□□□□□ -0.42
CCHCR1-210ENST00000464012 NDUFS6O75380 124 aaKnown RBP12.43□□□□□ -0.42
CCHCR1-210ENST00000464012 GAS8-AS1O95177 125 aa12.43□□□□□ -0.42
CCHCR1-210ENST00000464012 NCR2O95944 276 aa12.43□□□□□ -0.42
CCHCR1-210ENST00000464012 PMCHP20382 165 aa12.43□□□□□ -0.42
CCHCR1-210ENST00000464012 OSTCQ9NRP0 149 aa12.43□□□□□ -0.42
CCHCR1-210ENST00000464012 MYCBP2O75592 4640 aa12.42□□□□□ -0.42
CCHCR1-210ENST00000464012 GAGE12HA6NDE8 117 aa12.42□□□□□ -0.42
CCHCR1-210ENST00000464012 DMBT1Q9UGM3 2413 aaPredicted RBP12.42□□□□□ -0.42
CCHCR1-210ENST00000464012 I3L3M4 83 aa12.41□□□□□ -0.42
CCHCR1-210ENST00000464012 J3QL48 77 aa12.41□□□□□ -0.42
CCHCR1-210ENST00000464012 FGF6P10767 208 aa12.41□□□□□ -0.42
CCHCR1-210ENST00000464012 TMEM191AQ9H0A3 160 aa12.41□□□□□ -0.42
CCHCR1-210ENST00000464012 AP5S1Q9NUS5 200 aa12.41□□□□□ -0.42
CCHCR1-210ENST00000464012 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.41□□□□□ -0.42
CCHCR1-210ENST00000464012 V9GYV3 84 aa12.41□□□□□ -0.42
CCHCR1-210ENST00000464012 TRBV6-5A0A0K0K1A5 114 aa12.4□□□□□ -0.42
CCHCR1-210ENST00000464012 AMN1Q8IY45 258 aa12.4□□□□□ -0.42
CCHCR1-210ENST00000464012 RNF185Q96GF1 192 aa12.4□□□□□ -0.42
CCHCR1-210ENST00000464012 ST20Q9HBF5 79 aa12.4□□□□□ -0.42
CCHCR1-210ENST00000464012 TMEM242Q9NWH2 141 aa12.4□□□□□ -0.42
CCHCR1-210ENST00000464012 HERC1Q15751 4861 aa12.4□□□□□ -0.42
CCHCR1-210ENST00000464012 H7C423 109 aa12.39□□□□□ -0.43
CCHCR1-210ENST00000464012 PANO1I0J062 215 aa12.39□□□□□ -0.43
CCHCR1-210ENST00000464012 CNBPP62633 177 aaKnown RBP12.39□□□□□ -0.43
CCHCR1-210ENST00000464012 ADIRFQ15847 76 aa12.39□□□□□ -0.43
CCHCR1-210ENST00000464012 ISOC2Q96AB3 205 aa12.39□□□□□ -0.43
CCHCR1-210ENST00000464012 FAM231BA6NCW3 169 aa12.38□□□□□ -0.43
CCHCR1-210ENST00000464012 TSHBP01222 138 aa12.38□□□□□ -0.43
CCHCR1-210ENST00000464012 RAB4AP20338 218 aa12.38□□□□□ -0.43
CCHCR1-210ENST00000464012 RPS10P46783 165 aaKnown RBP12.38□□□□□ -0.43
CCHCR1-210ENST00000464012 KRTAP10-4P60372 401 aaPredicted RBP12.38□□□□□ -0.43
CCHCR1-210ENST00000464012 RPL23P62829 140 aaKnown RBP12.38□□□□□ -0.43
CCHCR1-210ENST00000464012 TMEM241Q24JQ0 296 aa12.38□□□□□ -0.43
CCHCR1-210ENST00000464012 C15orf56Q8N910 161 aa12.38□□□□□ -0.43
CCHCR1-210ENST00000464012 IGHV3-64A0A075B6Q5 118 aa12.37□□□□□ -0.43
CCHCR1-210ENST00000464012 C9JQL5 133 aa12.37□□□□□ -0.43
CCHCR1-210ENST00000464012 SMKR1H3BMG3 65 aa12.37□□□□□ -0.43
CCHCR1-210ENST00000464012 RIGQ13278 110 aa12.37□□□□□ -0.43
CCHCR1-210ENST00000464012 HIGD2BQ4VC39 106 aa12.37□□□□□ -0.43
CCHCR1-210ENST00000464012 SDIM1Q6ZPB5 146 aa12.37□□□□□ -0.43
CCHCR1-210ENST00000464012 NUP35Q8NFH5 326 aa12.37□□□□□ -0.43
CCHCR1-210ENST00000464012 CHCHD10Q8WYQ3 142 aaPredicted RBP12.37□□□□□ -0.43
CCHCR1-210ENST00000464012 MRAP2Q96G30 205 aa12.37□□□□□ -0.43
CCHCR1-210ENST00000464012 BTF3L4Q96K17 158 aa12.37□□□□□ -0.43
CCHCR1-210ENST00000464012 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.36□□□□□ -0.43
CCHCR1-210ENST00000464012 SLPIP03973 132 aa12.36□□□□□ -0.43
CCHCR1-210ENST00000464012 RPL37AP61513 92 aaKnown RBP12.36□□□□□ -0.43
CCHCR1-210ENST00000464012 SRSF3P84103 164 aaKnown RBP12.36□□□□□ -0.43
CCHCR1-210ENST00000464012 FAM74A3Q4VXF1 159 aa12.36□□□□□ -0.43
CCHCR1-210ENST00000464012 TMEM101Q96IK0 257 aa12.36□□□□□ -0.43
CCHCR1-210ENST00000464012 ZNF25P17030 456 aaPredicted RBP12.35□□□□□ -0.43
CCHCR1-210ENST00000464012 NAT8Q9UHE5 227 aa12.35□□□□□ -0.43
CCHCR1-210ENST00000464012 ESDP10768 282 aa12.34□□□□□ -0.43
CCHCR1-210ENST00000464012 CFAP161Q6P656 301 aa12.34□□□□□ -0.43
CCHCR1-210ENST00000464012 OR5A1Q8NGJ0 315 aa12.34□□□□□ -0.43
CCHCR1-210ENST00000464012 NAT8BQ9UHF3 227 aa12.34□□□□□ -0.43
CCHCR1-210ENST00000464012 CHTF8P0CG12 524 aa12.33□□□□□ -0.44
CCHCR1-210ENST00000464012 POLR2KP53803 58 aaKnown RBP12.33□□□□□ -0.44
CCHCR1-210ENST00000464012 PEA15Q15121 130 aa12.33□□□□□ -0.44
CCHCR1-210ENST00000464012 XCL1P47992 114 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms