RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	DGAT2L7P	Q6IED9	249 aa		7.13	□□□□□ -1.27
PTPN7-204	ENST00000462815	CLRN3	Q8NCR9	226 aa		7.13	□□□□□ -1.27
PTPN7-204	ENST00000462815	HLA-DQA1	P01909	254 aa		7.12	□□□□□ -1.27
PTPN7-204	ENST00000462815	RAB4B	P61018	213 aa		7.12	□□□□□ -1.27
PTPN7-204	ENST00000462815	MIA	Q16674	131 aa		7.12	□□□□□ -1.27
PTPN7-204	ENST00000462815	OR10AG1	Q8NH19	301 aa		7.12	□□□□□ -1.27
PTPN7-204	ENST00000462815	KIF25-AS1	Q9Y6Z4	181 aa		7.12	□□□□□ -1.27
PTPN7-204	ENST00000462815		V9GYV3	84 aa		7.12	□□□□□ -1.27
PTPN7-204	ENST00000462815	C7orf77	A4D0Y5	90 aa		7.11	□□□□□ -1.27
PTPN7-204	ENST00000462815	TMEM262	E9PQX1	116 aa		7.11	□□□□□ -1.27
PTPN7-204	ENST00000462815	SNAI2	O43623	268 aa		7.11	□□□□□ -1.27
PTPN7-204	ENST00000462815	GATC	O43716	136 aa	Known RBP	7.11	□□□□□ -1.27
PTPN7-204	ENST00000462815	CRP	P02741	224 aa		7.11	□□□□□ -1.27
PTPN7-204	ENST00000462815	ANG	P03950	147 aa	Known RBP	7.11	□□□□□ -1.27
PTPN7-204	ENST00000462815	CXCL1	P09341	107 aa		7.11	□□□□□ -1.27
PTPN7-204	ENST00000462815	RPL19	P84098	196 aa	Known RBP	7.11	□□□□□ -1.27
PTPN7-204	ENST00000462815		Q6ZRU5	148 aa		7.11	□□□□□ -1.27
PTPN7-204	ENST00000462815	SVBP	Q8N300	66 aa		7.11	□□□□□ -1.27
PTPN7-204	ENST00000462815	SSBP4	Q9BWG4	385 aa	Predicted RBP	7.11	□□□□□ -1.27
PTPN7-204	ENST00000462815	SNAPIN	O95295	136 aa		7.1	□□□□□ -1.27
PTPN7-204	ENST00000462815		P01737	135 aa		7.1	□□□□□ -1.27
PTPN7-204	ENST00000462815	SLPI	P03973	132 aa		7.1	□□□□□ -1.27
PTPN7-204	ENST00000462815	S100A1	P23297	94 aa		7.1	□□□□□ -1.27
PTPN7-204	ENST00000462815	CNBP	P62633	177 aa	Known RBP	7.1	□□□□□ -1.27
PTPN7-204	ENST00000462815	RBX1	P62877	108 aa		7.1	□□□□□ -1.27
PTPN7-204	ENST00000462815	KCNIP4	Q6PIL6	250 aa		7.1	□□□□□ -1.27
PTPN7-204	ENST00000462815	ANAPC16	Q96DE5	110 aa		7.1	□□□□□ -1.27
PTPN7-204	ENST00000462815	RPP21	Q9H633	154 aa	Known RBP	7.1	□□□□□ -1.27
PTPN7-204	ENST00000462815	MT-ND4L	P03901	98 aa		7.09	□□□□□ -1.27
PTPN7-204	ENST00000462815	GZMB	P10144	247 aa		7.09	□□□□□ -1.27
PTPN7-204	ENST00000462815	RHEB	Q15382	184 aa		7.09	□□□□□ -1.27
PTPN7-204	ENST00000462815	ZNF56	Q15929	161 aa		7.09	□□□□□ -1.27
PTPN7-204	ENST00000462815	CT83	Q5H943	113 aa		7.09	□□□□□ -1.27
PTPN7-204	ENST00000462815	CLPSL2	Q6UWE3	100 aa		7.09	□□□□□ -1.27
PTPN7-204	ENST00000462815	LINC00269	Q8N2A0	174 aa		7.09	□□□□□ -1.27
PTPN7-204	ENST00000462815	OR2D3	Q8NGH3	330 aa		7.09	□□□□□ -1.27
PTPN7-204	ENST00000462815	CHCHD5	Q9BSY4	110 aa		7.09	□□□□□ -1.27
PTPN7-204	ENST00000462815	PPP1R2P9	O14990	202 aa		7.08	□□□□□ -1.28
PTPN7-204	ENST00000462815	OR5AL1	P0C617	328 aa		7.08	□□□□□ -1.28
PTPN7-204	ENST00000462815	FOXA3	P55318	350 aa	Predicted RBP	7.08	□□□□□ -1.28
PTPN7-204	ENST00000462815	RPS20	P60866	119 aa	Known RBP	7.08	□□□□□ -1.28
PTPN7-204	ENST00000462815	IQCJ	Q1A5X6	159 aa		7.08	□□□□□ -1.28
PTPN7-204	ENST00000462815	C20orf203	Q8NBC4	194 aa		7.08	□□□□□ -1.28
PTPN7-204	ENST00000462815	GTSF1	Q8WW33	167 aa		7.08	□□□□□ -1.28
PTPN7-204	ENST00000462815	CTDSP1	Q9GZU7	261 aa		7.08	□□□□□ -1.28
PTPN7-204	ENST00000462815	TMEM242	Q9NWH2	141 aa		7.08	□□□□□ -1.28
PTPN7-204	ENST00000462815	SMIM27	A0A1W2PRY6	76 aa		7.07	□□□□□ -1.28
PTPN7-204	ENST00000462815		A8MWL6	223 aa		7.07	□□□□□ -1.28
PTPN7-204	ENST00000462815	IGLC6	P0CF74	106 aa		7.07	□□□□□ -1.28
PTPN7-204	ENST00000462815	PKIA	P61925	76 aa		7.07	□□□□□ -1.28
PTPN7-204	ENST00000462815	SPACA4	Q8TDM5	124 aa		7.07	□□□□□ -1.28
PTPN7-204	ENST00000462815	TSKU	Q8WUA8	353 aa		7.07	□□□□□ -1.28
PTPN7-204	ENST00000462815	GFRA4	Q9GZZ7	299 aa		7.07	□□□□□ -1.28
PTPN7-204	ENST00000462815	RPS10P5	Q9NQ39	176 aa		7.07	□□□□□ -1.28
PTPN7-204	ENST00000462815	MUC21	A0A0G2JKD1	596 aa		7.06	□□□□□ -1.28
PTPN7-204	ENST00000462815	MUC21	A0A140T8X8	626 aa		7.06	□□□□□ -1.28
PTPN7-204	ENST00000462815	FAM231B	A6NCW3	169 aa		7.06	□□□□□ -1.28
PTPN7-204	ENST00000462815	CHTF8	P0CG12	524 aa		7.06	□□□□□ -1.28
PTPN7-204	ENST00000462815	GAGE6	Q13070	117 aa		7.06	□□□□□ -1.28
PTPN7-204	ENST00000462815	IMMP2L	Q96T52	175 aa		7.06	□□□□□ -1.28
PTPN7-204	ENST00000462815		A0A087WYN8	130 aa		7.05	□□□□□ -1.28
PTPN7-204	ENST00000462815		M0QY20	66 aa		7.05	□□□□□ -1.28
PTPN7-204	ENST00000462815	REG3A	Q06141	175 aa		7.05	□□□□□ -1.28
PTPN7-204	ENST00000462815	TMEM97	Q5BJF2	176 aa		7.05	□□□□□ -1.28
PTPN7-204	ENST00000462815	NUP35	Q8NFH5	326 aa		7.05	□□□□□ -1.28
PTPN7-204	ENST00000462815	IGLV4-60	A0A075B6I1	120 aa		7.04	□□□□□ -1.28
PTPN7-204	ENST00000462815	IGLV10-54	A0A075B6I4	117 aa		7.04	□□□□□ -1.28
PTPN7-204	ENST00000462815	TRBV25-1	A0A075B6N4	114 aa		7.04	□□□□□ -1.28
PTPN7-204	ENST00000462815	XKRY2	A2RUG3	117 aa		7.04	□□□□□ -1.28
PTPN7-204	ENST00000462815	CTRL	P40313	264 aa		7.04	□□□□□ -1.28
PTPN7-204	ENST00000462815	ODF1	Q14990	250 aa		7.04	□□□□□ -1.28
PTPN7-204	ENST00000462815	LYZL1	Q6UWQ5	148 aa		7.04	□□□□□ -1.28
PTPN7-204	ENST00000462815	DPH3	Q96FX2	82 aa		7.04	□□□□□ -1.28
PTPN7-204	ENST00000462815	RNF185	Q96GF1	192 aa		7.04	□□□□□ -1.28
PTPN7-204	ENST00000462815	YPEL4	Q96NS1	127 aa		7.04	□□□□□ -1.28
PTPN7-204	ENST00000462815	PLAC8	Q9NZF1	115 aa		7.04	□□□□□ -1.28
PTPN7-204	ENST00000462815		A0A1B0GUV1	79 aa		7.03	□□□□□ -1.28
PTPN7-204	ENST00000462815	HIGD1C	A8MV81	97 aa		7.03	□□□□□ -1.28
PTPN7-204	ENST00000462815	SCO1	O75880	301 aa		7.03	□□□□□ -1.28
PTPN7-204	ENST00000462815	SPANXN1	Q5VSR9	72 aa		7.03	□□□□□ -1.28
PTPN7-204	ENST00000462815	WDR73	Q6P4I2	378 aa		7.03	□□□□□ -1.28
PTPN7-204	ENST00000462815	C15orf56	Q8N910	161 aa		7.03	□□□□□ -1.28
PTPN7-204	ENST00000462815	FER1L6-AS1	Q8NA97	138 aa		7.03	□□□□□ -1.28
PTPN7-204	ENST00000462815	PGLYRP4	Q96LB8	373 aa		7.03	□□□□□ -1.28
PTPN7-204	ENST00000462815	CNFN	Q9BYD5	112 aa		7.03	□□□□□ -1.28
PTPN7-204	ENST00000462815	NAT8B	Q9UHF3	227 aa		7.03	□□□□□ -1.28
PTPN7-204	ENST00000462815	IGHV3-64	A0A075B6Q5	118 aa		7.02	□□□□□ -1.29
PTPN7-204	ENST00000462815	TRAV8-4	A0A0B4J246	113 aa		7.02	□□□□□ -1.29
PTPN7-204	ENST00000462815	IGHV1-24	A0A0C4DH33	117 aa		7.02	□□□□□ -1.29
PTPN7-204	ENST00000462815	hDV102S1	A0JD36	115 aa		7.02	□□□□□ -1.29
PTPN7-204	ENST00000462815		F2Z2F3	143 aa		7.02	□□□□□ -1.29
PTPN7-204	ENST00000462815		F5H697	171 aa		7.02	□□□□□ -1.29
PTPN7-204	ENST00000462815	PHOX2A	O14813	284 aa		7.02	□□□□□ -1.29
PTPN7-204	ENST00000462815	SUMO4	Q6EEV6	95 aa		7.02	□□□□□ -1.29
PTPN7-204	ENST00000462815	AP1S3	Q96PC3	154 aa		7.02	□□□□□ -1.29
PTPN7-204	ENST00000462815	LPA	P08519	4548 aa		7.01	□□□□□ -1.29
PTPN7-204	ENST00000462815	CACNG7	P62955	275 aa		7.01	□□□□□ -1.29
PTPN7-204	ENST00000462815	CBLN2	Q8IUK8	224 aa		7.01	□□□□□ -1.29
PTPN7-204	ENST00000462815	LINC01600	Q96MT4	127 aa		7.01	□□□□□ -1.29
PTPN7-204	ENST00000462815	DPH3P1	Q9H4G8	78 aa		7.01	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms