RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 C20orf173Q96LM9 149 aa11.89□□□□□ -0.51
SMC4-204ENST00000462787 VPREB3Q9UKI3 123 aa11.89□□□□□ -0.51
SMC4-204ENST00000462787 APRG1Q8IVJ8 170 aa11.88□□□□□ -0.51
SMC4-204ENST00000462787 BRK1Q8WUW1 75 aa11.88□□□□□ -0.51
SMC4-204ENST00000462787 C11orf21Q9P2W6 132 aa11.88□□□□□ -0.51
SMC4-204ENST00000462787 WISP2O76076 250 aa11.88□□□□□ -0.51
SMC4-204ENST00000462787 TRBV12-3P01733 135 aa11.88□□□□□ -0.51
SMC4-204ENST00000462787 IGHV4-59P01825 116 aa11.88□□□□□ -0.51
SMC4-204ENST00000462787 ZFP36P26651 326 aaKnown RBP11.88□□□□□ -0.51
SMC4-204ENST00000462787 KIAA1549Q9HCM3 1950 aa11.88□□□□□ -0.51
SMC4-204ENST00000462787 POLR2KP53803 58 aaKnown RBP11.87□□□□□ -0.51
SMC4-204ENST00000462787 DEFB112Q30KQ8 113 aa11.87□□□□□ -0.51
SMC4-204ENST00000462787 FAM110AQ9BQ89 295 aa11.87□□□□□ -0.51
SMC4-204ENST00000462787 EBI3Q14213 229 aa11.87□□□□□ -0.51
SMC4-204ENST00000462787 NBASA2RRP1 2371 aa11.87□□□□□ -0.51
SMC4-204ENST00000462787 NACAE9PAV3 2078 aa11.87□□□□□ -0.51
SMC4-204ENST00000462787 RIF1Q5UIP0 2472 aaKnown RBP11.86□□□□□ -0.51
SMC4-204ENST00000462787 IGHV4-38-2P0DP08 117 aa11.85□□□□□ -0.51
SMC4-204ENST00000462787 FAM222AQ5U5X8 452 aa11.85□□□□□ -0.51
SMC4-204ENST00000462787 A0A096LPF7 62 aa11.85□□□□□ -0.51
SMC4-204ENST00000462787 C10orf142B7Z368 130 aa11.85□□□□□ -0.51
SMC4-204ENST00000462787 SLURP1P55000 103 aa11.85□□□□□ -0.51
SMC4-204ENST00000462787 PLXNB1O43157 2135 aa11.85□□□□□ -0.51
SMC4-204ENST00000462787 USP17L23D6RBM5 183 aa11.85□□□□□ -0.51
SMC4-204ENST00000462787 COX8CQ7Z4L0 72 aa11.85□□□□□ -0.51
SMC4-204ENST00000462787 LINC00467Q9BRT7 94 aa11.85□□□□□ -0.51
SMC4-204ENST00000462787 RNF223E7ERA6 249 aa11.84□□□□□ -0.51
SMC4-204ENST00000462787 LINC00694P0DN24 101 aa11.84□□□□□ -0.51
SMC4-204ENST00000462787 M0QXV9 152 aa11.84□□□□□ -0.51
SMC4-204ENST00000462787 IGIPA6NJ69 53 aa11.83□□□□□ -0.52
SMC4-204ENST00000462787 RNASE3P12724 160 aaKnown RBP11.83□□□□□ -0.52
SMC4-204ENST00000462787 Q6ZQT7 251 aa11.83□□□□□ -0.52
SMC4-204ENST00000462787 TSHBP01222 138 aa11.83□□□□□ -0.52
SMC4-204ENST00000462787 GYPEP15421 78 aa11.82□□□□□ -0.52
SMC4-204ENST00000462787 DEFB136Q30KP8 78 aa11.82□□□□□ -0.52
SMC4-204ENST00000462787 NDUFC2-KCTD14E9PQ53 114 aa11.82□□□□□ -0.52
SMC4-204ENST00000462787 NCR3O14931 201 aa11.82□□□□□ -0.52
SMC4-204ENST00000462787 IGHV4-61A0A0C4DH41 118 aa11.82□□□□□ -0.52
SMC4-204ENST00000462787 LINC00526Q96FQ7 95 aa11.82□□□□□ -0.52
SMC4-204ENST00000462787 CDIP1Q9H305 208 aa11.82□□□□□ -0.52
SMC4-204ENST00000462787 MP68P56378 58 aa11.81□□□□□ -0.52
SMC4-204ENST00000462787 DIRC1Q969H9 104 aa11.81□□□□□ -0.52
SMC4-204ENST00000462787 ENHOQ6UWT2 76 aa11.81□□□□□ -0.52
SMC4-204ENST00000462787 LINC01548A6NM66 108 aa11.81□□□□□ -0.52
SMC4-204ENST00000462787 IBA57-AS1B1ANH7 110 aa11.8□□□□□ -0.52
SMC4-204ENST00000462787 ATP5EP56381 51 aaPredicted RBP11.8□□□□□ -0.52
SMC4-204ENST00000462787 APOC4P55056 127 aa11.8□□□□□ -0.52
SMC4-204ENST00000462787 PSMG3-AS1Q96PY0 264 aa11.8□□□□□ -0.52
SMC4-204ENST00000462787 PRR9Q5T870 116 aa11.8□□□□□ -0.52
SMC4-204ENST00000462787 K7EQG2 157 aa11.79□□□□□ -0.52
SMC4-204ENST00000462787 Q6JHZ5 121 aa11.79□□□□□ -0.52
SMC4-204ENST00000462787 A6NDX4 124 aa11.79□□□□□ -0.52
SMC4-204ENST00000462787 PRB1P04280 392 aa11.79□□□□□ -0.52
SMC4-204ENST00000462787 HIGD2BQ4VC39 106 aa11.79□□□□□ -0.52
SMC4-204ENST00000462787 DEFB105AQ8NG35 78 aa11.79□□□□□ -0.52
SMC4-204ENST00000462787 SMIM9A6NGZ8 99 aa11.79□□□□□ -0.52
SMC4-204ENST00000462787 NDUFC1O43677 76 aa11.79□□□□□ -0.52
SMC4-204ENST00000462787 FBXL19-AS1Q494R0 122 aa11.79□□□□□ -0.52
SMC4-204ENST00000462787 PIK3CD-AS1Q5SR53 167 aa11.78□□□□□ -0.52
SMC4-204ENST00000462787 WFDC9Q8NEX5 89 aa11.78□□□□□ -0.52
SMC4-204ENST00000462787 CRIP2P52943 208 aaPredicted RBP11.78□□□□□ -0.52
SMC4-204ENST00000462787 C10orf105Q8TEF2 133 aa11.78□□□□□ -0.52
SMC4-204ENST00000462787 IGLV4-69A0A075B6H9 119 aa11.77□□□□□ -0.52
SMC4-204ENST00000462787 MRPS36P82909 103 aaKnown RBP11.77□□□□□ -0.52
SMC4-204ENST00000462787 MAPK1IP1LQ8NDC0 245 aa11.77□□□□□ -0.52
SMC4-204ENST00000462787 CCL24O00175 119 aa11.77□□□□□ -0.53
SMC4-204ENST00000462787 CPAMD8Q8IZJ3 1885 aa11.77□□□□□ -0.53
SMC4-204ENST00000462787 IGLV2-18A0A075B6J9 118 aa11.77□□□□□ -0.53
SMC4-204ENST00000462787 IGLV10-54A0A075B6I4 117 aa11.77□□□□□ -0.53
SMC4-204ENST00000462787 C22orf34Q6ZV56 151 aa11.76□□□□□ -0.53
SMC4-204ENST00000462787 CAMK2N2Q96S95 79 aa11.76□□□□□ -0.53
SMC4-204ENST00000462787 KLLNB2CW77 178 aa11.76□□□□□ -0.53
SMC4-204ENST00000462787 Q8N6K4 173 aa11.76□□□□□ -0.53
SMC4-204ENST00000462787 EML5Q05BV3 1969 aa11.75□□□□□ -0.53
SMC4-204ENST00000462787 A8MZ25 164 aa11.75□□□□□ -0.53
SMC4-204ENST00000462787 SLPIP03973 132 aa11.75□□□□□ -0.53
SMC4-204ENST00000462787 C9orf85Q96MD7 179 aa11.74□□□□□ -0.53
SMC4-204ENST00000462787 SPAG11BQ08648 103 aa11.74□□□□□ -0.53
SMC4-204ENST00000462787 ETDCA0A1B0GVM5 59 aa11.74□□□□□ -0.53
SMC4-204ENST00000462787 COX7BP24311 80 aa11.74□□□□□ -0.53
SMC4-204ENST00000462787 CRYGDP07320 174 aa11.73□□□□□ -0.53
SMC4-204ENST00000462787 IGHV4-28A0A0C4DH34 117 aa11.73□□□□□ -0.53
SMC4-204ENST00000462787 PRR14LQ5THK1 2151 aa11.73□□□□□ -0.53
SMC4-204ENST00000462787 V9GYY9 64 aa11.73□□□□□ -0.53
SMC4-204ENST00000462787 MAP6D1Q9H9H5 199 aa11.72□□□□□ -0.53
SMC4-204ENST00000462787 UBE2D4Q9Y2X8 147 aa11.72□□□□□ -0.53
SMC4-204ENST00000462787 TSPEAR-AS2P59090 65 aa11.72□□□□□ -0.53
SMC4-204ENST00000462787 PKIGQ9Y2B9 76 aa11.72□□□□□ -0.53
SMC4-204ENST00000462787 LINC01546A6NGU7 62 aa11.71□□□□□ -0.53
SMC4-204ENST00000462787 BPY2O14599 106 aa11.71□□□□□ -0.53
SMC4-204ENST00000462787 RMI2Q96E14 147 aa11.71□□□□□ -0.53
SMC4-204ENST00000462787 IGHV4-30-2A0A087WSY4 118 aa11.71□□□□□ -0.53
SMC4-204ENST00000462787 CLPSL1A2RUU4 121 aa11.71□□□□□ -0.53
SMC4-204ENST00000462787 POM121L12Q8N7R1 296 aa11.71□□□□□ -0.53
SMC4-204ENST00000462787 PSCAO43653 123 aa11.7□□□□□ -0.54
SMC4-204ENST00000462787 MPLKIPQ8TAP9 179 aa11.7□□□□□ -0.54
SMC4-204ENST00000462787 ADORA2A-AS1P86434 159 aa11.7□□□□□ -0.54
SMC4-204ENST00000462787 LMO4P61968 165 aa11.7□□□□□ -0.54
SMC4-204ENST00000462787 TANC2Q9HCD6 1990 aa11.69□□□□□ -0.54
SMC4-204ENST00000462787 PRO0461Q9UI25 63 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms