RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 H7C1H1 209 aa6.75□□□□□ -1.33
CBX3-205ENST00000462165 S100A9P06702 114 aaKnown RBP6.75□□□□□ -1.33
CBX3-205ENST00000462165 DEFA1P59665 94 aa6.75□□□□□ -1.33
CBX3-205ENST00000462165 DEFA3P59666 94 aa6.75□□□□□ -1.33
CBX3-205ENST00000462165 SSTP61278 116 aa6.75□□□□□ -1.33
CBX3-205ENST00000462165 SRSF9Q13242 221 aaKnown RBP eCLIP6.75□□□□□ -1.33
CBX3-205ENST00000462165 LYPD6BQ8NI32 183 aa6.75□□□□□ -1.33
CBX3-205ENST00000462165 STOML3Q8TAV4 291 aa6.75□□□□□ -1.33
CBX3-205ENST00000462165 PGLYRP4Q96LB8 373 aa6.75□□□□□ -1.33
CBX3-205ENST00000462165 GAGE12HA6NDE8 117 aa6.74□□□□□ -1.33
CBX3-205ENST00000462165 SULT1A2P50226 295 aa6.74□□□□□ -1.33
CBX3-205ENST00000462165 HIGD2BQ4VC39 106 aa6.74□□□□□ -1.33
CBX3-205ENST00000462165 Q5BKY6 102 aa6.74□□□□□ -1.33
CBX3-205ENST00000462165 SUMO4Q6EEV6 95 aa6.74□□□□□ -1.33
CBX3-205ENST00000462165 BAGE2Q86Y30 109 aa6.74□□□□□ -1.33
CBX3-205ENST00000462165 INO80EQ8NBZ0 244 aaPredicted RBP6.74□□□□□ -1.33
CBX3-205ENST00000462165 ALG5Q9Y673 324 aa6.74□□□□□ -1.33
CBX3-205ENST00000462165 A0A096LNI7 61 aa6.73□□□□□ -1.33
CBX3-205ENST00000462165 GVQW2A0A096LPI5 108 aaPredicted RBP6.73□□□□□ -1.33
CBX3-205ENST00000462165 UBE2L6O14933 153 aa6.73□□□□□ -1.33
CBX3-205ENST00000462165 MGPP08493 103 aa6.73□□□□□ -1.33
CBX3-205ENST00000462165 NKX2-5P52952 324 aaPredicted RBP6.73□□□□□ -1.33
CBX3-205ENST00000462165 LINC00474Q9P2X8 69 aa6.73□□□□□ -1.33
CBX3-205ENST00000462165 PAGE4O60829 102 aa6.72□□□□□ -1.33
CBX3-205ENST00000462165 RASL11AQ6T310 242 aa6.72□□□□□ -1.33
CBX3-205ENST00000462165 Q6ZRP5 223 aa6.72□□□□□ -1.33
CBX3-205ENST00000462165 MUC2Q02817 5179 aa6.72□□□□□ -1.33
CBX3-205ENST00000462165 AMTP48728 403 aa6.71□□□□□ -1.34
CBX3-205ENST00000462165 NIT2Q9NQR4 276 aa6.71□□□□□ -1.34
CBX3-205ENST00000462165 GIPP09681 153 aaPredicted RBP6.7□□□□□ -1.34
CBX3-205ENST00000462165 IGLC6P0CF74 106 aa6.7□□□□□ -1.34
CBX3-205ENST00000462165 COTL1Q14019 142 aa6.7□□□□□ -1.34
CBX3-205ENST00000462165 CHCHD10Q8WYQ3 142 aaPredicted RBP6.7□□□□□ -1.34
CBX3-205ENST00000462165 MED28Q9H204 178 aa6.7□□□□□ -1.34
CBX3-205ENST00000462165 PKIGQ9Y2B9 76 aa6.7□□□□□ -1.34
CBX3-205ENST00000462165 FXYD6-FXYD2A0A087WZ82 144 aa6.69□□□□□ -1.34
CBX3-205ENST00000462165 IGKV3OR2-268A0A0C4DH90 116 aa6.69□□□□□ -1.34
CBX3-205ENST00000462165 PFDN1O60925 122 aa6.69□□□□□ -1.34
CBX3-205ENST00000462165 CACNG7P62955 275 aa6.69□□□□□ -1.34
CBX3-205ENST00000462165 TMUB2Q71RG4 321 aa6.69□□□□□ -1.34
CBX3-205ENST00000462165 FER1L6-AS1Q8NA97 138 aa6.69□□□□□ -1.34
CBX3-205ENST00000462165 CYTL1Q9NRR1 136 aa6.69□□□□□ -1.34
CBX3-205ENST00000462165 LCE1DQ5T752 114 aa6.68□□□□□ -1.34
CBX3-205ENST00000462165 TPPP3Q9BW30 176 aa6.68□□□□□ -1.34
CBX3-205ENST00000462165 FAM231BA6NCW3 169 aa6.67□□□□□ -1.34
CBX3-205ENST00000462165 TRGC1P0CF51 173 aa6.67□□□□□ -1.34
CBX3-205ENST00000462165 RPS20P60866 119 aaKnown RBP6.67□□□□□ -1.34
CBX3-205ENST00000462165 FOXI1Q12951 378 aa6.67□□□□□ -1.34
CBX3-205ENST00000462165 MBD3L1Q8WWY6 194 aa6.67□□□□□ -1.34
CBX3-205ENST00000462165 KRTAP4-7Q9BYR0 210 aa6.67□□□□□ -1.34
CBX3-205ENST00000462165 F2Z2F3 143 aa6.66□□□□□ -1.34
CBX3-205ENST00000462165 RPL35P42766 123 aaKnown RBP6.66□□□□□ -1.34
CBX3-205ENST00000462165 AMMECR1LQ6DCA0 310 aa6.66□□□□□ -1.34
CBX3-205ENST00000462165 OR2D3Q8NGH3 330 aa6.66□□□□□ -1.34
CBX3-205ENST00000462165 SFT2D1Q8WV19 159 aa6.66□□□□□ -1.34
CBX3-205ENST00000462165 CARD19Q96LW7 228 aa6.66□□□□□ -1.34
CBX3-205ENST00000462165 IGHV1-58A0A0C4DH39 117 aa6.65□□□□□ -1.34
CBX3-205ENST00000462165 C19orf71A6NCJ1 209 aa6.65□□□□□ -1.34
CBX3-205ENST00000462165 H7C423 109 aa6.65□□□□□ -1.34
CBX3-205ENST00000462165 NCR2O95944 276 aa6.65□□□□□ -1.34
CBX3-205ENST00000462165 NTF3P20783 257 aa6.65□□□□□ -1.34
CBX3-205ENST00000462165 RNASEKQ6P5S7 137 aaKnown RBP6.65□□□□□ -1.34
CBX3-205ENST00000462165 LINC00526Q96FQ7 95 aa6.65□□□□□ -1.34
CBX3-205ENST00000462165 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.64□□□□□ -1.35
CBX3-205ENST00000462165 A0A1B0GV50 99 aa6.64□□□□□ -1.35
CBX3-205ENST00000462165 IGKV2-29A2NJV5 120 aaPredicted RBP6.64□□□□□ -1.35
CBX3-205ENST00000462165 XKRY2A2RUG3 117 aa6.64□□□□□ -1.35
CBX3-205ENST00000462165 G3V3Q6 166 aa6.64□□□□□ -1.35
CBX3-205ENST00000462165 FGF6P10767 208 aa6.64□□□□□ -1.35
CBX3-205ENST00000462165 PTTG1IPP53801 180 aa6.64□□□□□ -1.35
CBX3-205ENST00000462165 LYZL1Q6UWQ5 148 aa6.64□□□□□ -1.35
CBX3-205ENST00000462165 Q6ZNX1 250 aa6.64□□□□□ -1.35
CBX3-205ENST00000462165 ZNF664Q8N3J9 261 aa6.64□□□□□ -1.35
CBX3-205ENST00000462165 KCNRGQ8N5I3 272 aa6.64□□□□□ -1.35
CBX3-205ENST00000462165 GATD1Q8NB37 220 aa6.64□□□□□ -1.35
CBX3-205ENST00000462165 OR5A1Q8NGJ0 315 aa6.64□□□□□ -1.35
CBX3-205ENST00000462165 FAM213BQ8TBF2 198 aa6.64□□□□□ -1.35
CBX3-205ENST00000462165 C11orf52Q96A22 123 aa6.64□□□□□ -1.35
CBX3-205ENST00000462165 PSORS1C2Q9UIG4 136 aa6.64□□□□□ -1.35
CBX3-205ENST00000462165 UMAD1C9J7I0 102 aa6.63□□□□□ -1.35
CBX3-205ENST00000462165 ARPC5O15511 151 aa6.63□□□□□ -1.35
CBX3-205ENST00000462165 ZNF25P17030 456 aaPredicted RBP6.63□□□□□ -1.35
CBX3-205ENST00000462165 XCL1P47992 114 aa6.63□□□□□ -1.35
CBX3-205ENST00000462165 SYCNQ0VAF6 134 aa6.63□□□□□ -1.35
CBX3-205ENST00000462165 CENPWQ5EE01 88 aa6.63□□□□□ -1.35
CBX3-205ENST00000462165 LINC00959A0A1B0GUT2 108 aa6.62□□□□□ -1.35
CBX3-205ENST00000462165 A0A1W2PNN7 141 aa6.62□□□□□ -1.35
CBX3-205ENST00000462165 ZNF561-AS1K7EIQ3 104 aa6.62□□□□□ -1.35
CBX3-205ENST00000462165 CCL25O15444 150 aa6.62□□□□□ -1.35
CBX3-205ENST00000462165 IFNA1P01562 189 aa6.62□□□□□ -1.35
CBX3-205ENST00000462165 APCSP02743 223 aa6.62□□□□□ -1.35
CBX3-205ENST00000462165 C9orf62Q8N4C0 152 aa6.62□□□□□ -1.35
CBX3-205ENST00000462165 SMIM12Q96EX1 92 aa6.62□□□□□ -1.35
CBX3-205ENST00000462165 CNFNQ9BYD5 112 aa6.62□□□□□ -1.35
CBX3-205ENST00000462165 TRAV26-2A0A0B4J265 109 aa6.61□□□□□ -1.35
CBX3-205ENST00000462165 LOC107984640A0A0U1RRK4 108 aa6.61□□□□□ -1.35
CBX3-205ENST00000462165 MT-ND6P03923 174 aa6.61□□□□□ -1.35
CBX3-205ENST00000462165 CTRLP40313 264 aa6.61□□□□□ -1.35
CBX3-205ENST00000462165 GAGE2BQ13066 116 aa6.61□□□□□ -1.35
CBX3-205ENST00000462165 BTF3L4Q96K17 158 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms