RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.59□□□□□ -1.03
PDZRN3-203ENST00000462146 IGHV4-59P01825 116 aa8.59□□□□□ -1.03
PDZRN3-203ENST00000462146 TEX29Q8N6K0 151 aa8.59□□□□□ -1.03
PDZRN3-203ENST00000462146 ZANQ9Y493 2812 aa8.59□□□□□ -1.04
PDZRN3-203ENST00000462146 TMEM262E9PQX1 116 aa8.58□□□□□ -1.04
PDZRN3-203ENST00000462146 GNLYP22749 145 aa8.58□□□□□ -1.04
PDZRN3-203ENST00000462146 Q6ZSN1 163 aa8.58□□□□□ -1.04
PDZRN3-203ENST00000462146 NHLRC4P0CG21 123 aaPredicted RBP8.58□□□□□ -1.04
PDZRN3-203ENST00000462146 DAND5Q8N907 189 aa8.58□□□□□ -1.04
PDZRN3-203ENST00000462146 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.57□□□□□ -1.04
PDZRN3-203ENST00000462146 IGKV2-29A2NJV5 120 aaPredicted RBP8.57□□□□□ -1.04
PDZRN3-203ENST00000462146 MRPS36P82909 103 aaKnown RBP8.57□□□□□ -1.04
PDZRN3-203ENST00000462146 CLEC2BQ92478 149 aa8.57□□□□□ -1.04
PDZRN3-203ENST00000462146 CCL19Q99731 98 aa8.57□□□□□ -1.04
PDZRN3-203ENST00000462146 NDUFA12Q9UI09 145 aa8.57□□□□□ -1.04
PDZRN3-203ENST00000462146 ICOSQ9Y6W8 199 aa8.57□□□□□ -1.04
PDZRN3-203ENST00000462146 IGHV3-38A0A0C4DH36 116 aa8.57□□□□□ -1.04
PDZRN3-203ENST00000462146 TRBV30A0A0K0K1B3 111 aa8.57□□□□□ -1.04
PDZRN3-203ENST00000462146 M0QXV9 152 aa8.57□□□□□ -1.04
PDZRN3-203ENST00000462146 MSMBP08118 114 aa8.57□□□□□ -1.04
PDZRN3-203ENST00000462146 SS18L2Q9UHA2 77 aa8.57□□□□□ -1.04
PDZRN3-203ENST00000462146 IGHV1-58A0A0C4DH39 117 aa8.56□□□□□ -1.04
PDZRN3-203ENST00000462146 CREBBPQ92793 2442 aa8.56□□□□□ -1.04
PDZRN3-203ENST00000462146 TRBV10-2A0A0K0K1G8 114 aa8.56□□□□□ -1.04
PDZRN3-203ENST00000462146 IGSF10Q6WRI0 2623 aa8.55□□□□□ -1.04
PDZRN3-203ENST00000462146 AKAP9Q99996 3911 aa8.55□□□□□ -1.04
PDZRN3-203ENST00000462146 H7C423 109 aa8.55□□□□□ -1.04
PDZRN3-203ENST00000462146 ATP5J2P56134 94 aa8.55□□□□□ -1.04
PDZRN3-203ENST00000462146 DEFB112Q30KQ8 113 aa8.55□□□□□ -1.04
PDZRN3-203ENST00000462146 CHCHD7Q9BUK0 85 aa8.55□□□□□ -1.04
PDZRN3-203ENST00000462146 TRGV11A0A075B6L2 103 aa8.55□□□□□ -1.04
PDZRN3-203ENST00000462146 H3BMM0 161 aa8.55□□□□□ -1.04
PDZRN3-203ENST00000462146 SNCGO76070 127 aa8.55□□□□□ -1.04
PDZRN3-203ENST00000462146 UBE2WQ96B02 151 aa8.55□□□□□ -1.04
PDZRN3-203ENST00000462146 PYGO1Q9Y3Y4 419 aa8.55□□□□□ -1.04
PDZRN3-203ENST00000462146 TRAV8-4A0A0B4J246 113 aa8.54□□□□□ -1.04
PDZRN3-203ENST00000462146 C2orf82Q6UX34 121 aa8.54□□□□□ -1.04
PDZRN3-203ENST00000462146 VSIG2Q96IQ7 327 aa8.54□□□□□ -1.04
PDZRN3-203ENST00000462146 TNFRSF18Q9Y5U5 241 aa8.54□□□□□ -1.04
PDZRN3-203ENST00000462146 RBMY1BA6NDE4 496 aaKnown RBP8.54□□□□□ -1.04
PDZRN3-203ENST00000462146 RBMY1EA6NEQ0 496 aaKnown RBP8.54□□□□□ -1.04
PDZRN3-203ENST00000462146 RBMY1DP0C7P1 496 aaKnown RBP8.54□□□□□ -1.04
PDZRN3-203ENST00000462146 MIAQ16674 131 aa8.54□□□□□ -1.04
PDZRN3-203ENST00000462146 NRGNQ92686 78 aa8.54□□□□□ -1.04
PDZRN3-203ENST00000462146 LINC00467Q9BRT7 94 aa8.54□□□□□ -1.04
PDZRN3-203ENST00000462146 UBE2D4Q9Y2X8 147 aa8.54□□□□□ -1.04
PDZRN3-203ENST00000462146 GAGE2BQ13066 116 aa8.53□□□□□ -1.04
PDZRN3-203ENST00000462146 DEFB136Q30KP8 78 aa8.53□□□□□ -1.04
PDZRN3-203ENST00000462146 GAGE2EQ4V326 116 aa8.53□□□□□ -1.04
PDZRN3-203ENST00000462146 HIST2H2BDQ6DRA6 164 aa8.53□□□□□ -1.04
PDZRN3-203ENST00000462146 C18orf65Q6ZTR6 163 aa8.53□□□□□ -1.04
PDZRN3-203ENST00000462146 SPANXDQ9BXN6 97 aa8.53□□□□□ -1.04
PDZRN3-203ENST00000462146 SPANXCQ9NY87 97 aa8.53□□□□□ -1.04
PDZRN3-203ENST00000462146 GAGE2DQ9UEU5 116 aa8.53□□□□□ -1.04
PDZRN3-203ENST00000462146 B5MCH6 92 aa8.53□□□□□ -1.04
PDZRN3-203ENST00000462146 HOXD3P31249 432 aaPredicted RBP8.53□□□□□ -1.04
PDZRN3-203ENST00000462146 RPL13AP40429 203 aaKnown RBP8.53□□□□□ -1.04
PDZRN3-203ENST00000462146 NDUFV3P56181 108 aaKnown RBP8.53□□□□□ -1.04
PDZRN3-203ENST00000462146 DEFB131AP59861 70 aa8.53□□□□□ -1.04
PDZRN3-203ENST00000462146 TTC32Q5I0X7 151 aa8.53□□□□□ -1.04
PDZRN3-203ENST00000462146 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.53□□□□□ -1.04
PDZRN3-203ENST00000462146 C15orf53Q8NAA6 179 aa8.53□□□□□ -1.04
PDZRN3-203ENST00000462146 MXRA5Q9NR99 2828 aa8.52□□□□□ -1.04
PDZRN3-203ENST00000462146 DUX3Q96PT4 197 aa8.52□□□□□ -1.05
PDZRN3-203ENST00000462146 FLNCQ14315 2725 aa8.52□□□□□ -1.05
PDZRN3-203ENST00000462146 KMT2BQ9UMN6 2715 aaPredicted RBP8.52□□□□□ -1.05
PDZRN3-203ENST00000462146 TINCRA0A1B0GVN0 87 aa8.52□□□□□ -1.05
PDZRN3-203ENST00000462146 MAPK1IP1LQ8NDC0 245 aa8.52□□□□□ -1.05
PDZRN3-203ENST00000462146 CDKN2A-AS1Q9UH64 79 aa8.52□□□□□ -1.05
PDZRN3-203ENST00000462146 ZFYVE26Q68DK2 2539 aa8.52□□□□□ -1.05
PDZRN3-203ENST00000462146 A0A0U1RRA0 63 aa8.51□□□□□ -1.05
PDZRN3-203ENST00000462146 CCDC179H3BU77 68 aa8.51□□□□□ -1.05
PDZRN3-203ENST00000462146 TMEM61Q8N0U2 210 aa8.51□□□□□ -1.05
PDZRN3-203ENST00000462146 BBC3Q96PG8 261 aaPredicted RBP8.51□□□□□ -1.05
PDZRN3-203ENST00000462146 SLURP1P55000 103 aa8.51□□□□□ -1.05
PDZRN3-203ENST00000462146 ZNF625Q96I27 306 aaPredicted RBP8.5□□□□□ -1.05
PDZRN3-203ENST00000462146 COX6A2Q02221 97 aa8.5□□□□□ -1.05
PDZRN3-203ENST00000462146 GAGE5Q13069 117 aa8.5□□□□□ -1.05
PDZRN3-203ENST00000462146 GAGE6Q13070 117 aa8.5□□□□□ -1.05
PDZRN3-203ENST00000462146 LINC01600Q96MT4 127 aa8.5□□□□□ -1.05
PDZRN3-203ENST00000462146 EDA2RQ9HAV5 297 aa8.5□□□□□ -1.05
PDZRN3-203ENST00000462146 LST1O00453 97 aa8.49□□□□□ -1.05
PDZRN3-203ENST00000462146 CFAP46Q8IYW2 2715 aa8.49□□□□□ -1.05
PDZRN3-203ENST00000462146 NDUFA7O95182 113 aa8.49□□□□□ -1.05
PDZRN3-203ENST00000462146 RNF152Q8N8N0 203 aa8.49□□□□□ -1.05
PDZRN3-203ENST00000462146 TMEM101Q96IK0 257 aa8.49□□□□□ -1.05
PDZRN3-203ENST00000462146 CITED2Q99967 270 aaPredicted RBP8.49□□□□□ -1.05
PDZRN3-203ENST00000462146 USP9YO00507 2555 aaPredicted RBP8.49□□□□□ -1.05
PDZRN3-203ENST00000462146 B4DSR2 109 aa8.48□□□□□ -1.05
PDZRN3-203ENST00000462146 IFITM1P13164 125 aa8.48□□□□□ -1.05
PDZRN3-203ENST00000462146 SPANXA1Q9NS26 97 aa8.48□□□□□ -1.05
PDZRN3-203ENST00000462146 COX6CP09669 75 aa8.48□□□□□ -1.05
PDZRN3-203ENST00000462146 POLQO75417 2590 aa8.48□□□□□ -1.05
PDZRN3-203ENST00000462146 H3BT86 120 aa8.47□□□□□ -1.05
PDZRN3-203ENST00000462146 PRB1P04280 392 aa8.47□□□□□ -1.05
PDZRN3-203ENST00000462146 USP9XQ93008 2570 aaPredicted RBP8.47□□□□□ -1.05
PDZRN3-203ENST00000462146 ANKRD17O75179 2603 aaKnown RBP8.47□□□□□ -1.05
PDZRN3-203ENST00000462146 TMEM89A2RUT3 159 aa8.47□□□□□ -1.05
PDZRN3-203ENST00000462146 ZNF415Q09FC8 603 aa8.47□□□□□ -1.05
PDZRN3-203ENST00000462146 ZNF843Q8N446 348 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms