RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 DNAJC30Q96LL9 226 aa10.84□□□□□ -0.67
SF3A3-203ENST00000461869 SMIM2Q9BVW6 85 aa10.84□□□□□ -0.67
SF3A3-203ENST00000461869 TRGV4A0A0C4DH28 118 aa10.83□□□□□ -0.68
SF3A3-203ENST00000461869 TRBV6-4A0A1B0GX49 114 aa10.83□□□□□ -0.68
SF3A3-203ENST00000461869 K7EQD1 137 aa10.83□□□□□ -0.68
SF3A3-203ENST00000461869 IFI27P40305 119 aaPredicted RBP10.83□□□□□ -0.68
SF3A3-203ENST00000461869 TMEM18Q96B42 140 aa10.83□□□□□ -0.68
SF3A3-203ENST00000461869 TCAPO15273 167 aa10.82□□□□□ -0.68
SF3A3-203ENST00000461869 LINC00310P59036 64 aa10.82□□□□□ -0.68
SF3A3-203ENST00000461869 RHOHQ15669 191 aa10.82□□□□□ -0.68
SF3A3-203ENST00000461869 PACRGQ96M98 296 aaPredicted RBP10.82□□□□□ -0.68
SF3A3-203ENST00000461869 TNFRSF18Q9Y5U5 241 aa10.82□□□□□ -0.68
SF3A3-203ENST00000461869 SDHAF1A6NFY7 115 aa10.81□□□□□ -0.68
SF3A3-203ENST00000461869 LINC01546A6NGU7 62 aa10.81□□□□□ -0.68
SF3A3-203ENST00000461869 C16orf90A8MZG2 172 aa10.81□□□□□ -0.68
SF3A3-203ENST00000461869 VCYO14598 125 aa10.81□□□□□ -0.68
SF3A3-203ENST00000461869 ATP5G1P05496 136 aa10.81□□□□□ -0.68
SF3A3-203ENST00000461869 KIR2DL4Q99706 377 aa10.81□□□□□ -0.68
SF3A3-203ENST00000461869 PRADC1Q9BSG0 188 aa10.81□□□□□ -0.68
SF3A3-203ENST00000461869 TMEM70Q9BUB7 260 aa10.81□□□□□ -0.68
SF3A3-203ENST00000461869 AMTP48728 403 aa10.8□□□□□ -0.68
SF3A3-203ENST00000461869 RPL36AP83881 106 aaKnown RBP10.8□□□□□ -0.68
SF3A3-203ENST00000461869 PDZD11Q5EBL8 140 aa10.8□□□□□ -0.68
SF3A3-203ENST00000461869 RPL36ALQ969Q0 106 aaKnown RBP10.8□□□□□ -0.68
SF3A3-203ENST00000461869 URB1-AS1Q96HZ7 61 aa10.8□□□□□ -0.68
SF3A3-203ENST00000461869 TRBV27A0A0K0K1C4 114 aa10.79□□□□□ -0.68
SF3A3-203ENST00000461869 POLR2KP53803 58 aaKnown RBP10.79□□□□□ -0.68
SF3A3-203ENST00000461869 TNP2Q05952 138 aa10.79□□□□□ -0.68
SF3A3-203ENST00000461869 FHL2Q14192 279 aa10.79□□□□□ -0.68
SF3A3-203ENST00000461869 ORMDL2Q53FV1 153 aa10.79□□□□□ -0.68
SF3A3-203ENST00000461869 Q6ZSN1 163 aa10.79□□□□□ -0.68
SF3A3-203ENST00000461869 NEXN-AS1Q8NBZ9 246 aa10.79□□□□□ -0.68
SF3A3-203ENST00000461869 NUPR1O60356 82 aa10.78□□□□□ -0.68
SF3A3-203ENST00000461869 CDK2AP2O75956 126 aa10.78□□□□□ -0.68
SF3A3-203ENST00000461869 G0S2P27469 103 aa10.78□□□□□ -0.68
SF3A3-203ENST00000461869 LAGE3Q14657 143 aa10.78□□□□□ -0.68
SF3A3-203ENST00000461869 MAPKAPK5-AS1Q8N8E1 139 aa10.78□□□□□ -0.68
SF3A3-203ENST00000461869 SLC25A29Q8N8R3 303 aa10.78□□□□□ -0.68
SF3A3-203ENST00000461869 HIST1H2BLQ99880 126 aa10.78□□□□□ -0.68
SF3A3-203ENST00000461869 PRO0255Q9UI72 69 aa10.78□□□□□ -0.68
SF3A3-203ENST00000461869 TRBV7-3A0A075B6L6 115 aa10.77□□□□□ -0.69
SF3A3-203ENST00000461869 IGHV1-24A0A0C4DH33 117 aa10.77□□□□□ -0.69
SF3A3-203ENST00000461869 I3L3M4 83 aa10.77□□□□□ -0.69
SF3A3-203ENST00000461869 FABP4P15090 132 aa10.77□□□□□ -0.69
SF3A3-203ENST00000461869 HHLA3Q9XRX5 114 aa10.77□□□□□ -0.69
SF3A3-203ENST00000461869 HSPG2P98160 4391 aa10.77□□□□□ -0.69
SF3A3-203ENST00000461869 LOC105371267A0A1B0GV96 52 aa10.76□□□□□ -0.69
SF3A3-203ENST00000461869 LINC01549A6NIU2 74 aa10.76□□□□□ -0.69
SF3A3-203ENST00000461869 HBDP02042 147 aa10.76□□□□□ -0.69
SF3A3-203ENST00000461869 FCER1GP30273 86 aa10.76□□□□□ -0.69
SF3A3-203ENST00000461869 C15orf53Q8NAA6 179 aa10.76□□□□□ -0.69
SF3A3-203ENST00000461869 CRYBA4P53673 196 aa10.75□□□□□ -0.69
SF3A3-203ENST00000461869 DAZ4Q86SG3 579 aaKnown RBP10.75□□□□□ -0.69
SF3A3-203ENST00000461869 FAM19A2Q8N3H0 131 aa10.75□□□□□ -0.69
SF3A3-203ENST00000461869 DAZ3Q9NR90 486 aaKnown RBP10.75□□□□□ -0.69
SF3A3-203ENST00000461869 IFITM10A6NMD0 228 aa10.74□□□□□ -0.69
SF3A3-203ENST00000461869 C6orf223Q8N319 242 aa10.74□□□□□ -0.69
SF3A3-203ENST00000461869 ZNRF2Q8NHG8 242 aa10.74□□□□□ -0.69
SF3A3-203ENST00000461869 HSPB8Q9UJY1 196 aa10.74□□□□□ -0.69
SF3A3-203ENST00000461869 GAGE12JA6NER3 117 aa10.73□□□□□ -0.69
SF3A3-203ENST00000461869 F5H768 121 aa10.73□□□□□ -0.69
SF3A3-203ENST00000461869 PAX4O43316 350 aa10.73□□□□□ -0.69
SF3A3-203ENST00000461869 LEPROTL1O95214 131 aa10.73□□□□□ -0.69
SF3A3-203ENST00000461869 NUDT3O95989 172 aa10.73□□□□□ -0.69
SF3A3-203ENST00000461869 UBE2D3P61077 147 aa10.73□□□□□ -0.69
SF3A3-203ENST00000461869 UBE2D2P62837 147 aa10.73□□□□□ -0.69
SF3A3-203ENST00000461869 GAGE1Q13065 139 aa10.73□□□□□ -0.69
SF3A3-203ENST00000461869 GAGE4Q13068 117 aa10.73□□□□□ -0.69
SF3A3-203ENST00000461869 GAGE5Q13069 117 aa10.73□□□□□ -0.69
SF3A3-203ENST00000461869 COTL1Q14019 142 aa10.73□□□□□ -0.69
SF3A3-203ENST00000461869 GAGE13Q4V321 117 aa10.73□□□□□ -0.69
SF3A3-203ENST00000461869 NEGR1Q7Z3B1 354 aa10.73□□□□□ -0.69
SF3A3-203ENST00000461869 NBDYA0A0U1RRE5 68 aa10.72□□□□□ -0.69
SF3A3-203ENST00000461869 AKR1D1P51857 326 aa10.72□□□□□ -0.69
SF3A3-203ENST00000461869 PMCHL1Q16048 86 aa10.72□□□□□ -0.69
SF3A3-203ENST00000461869 TMEM97Q5BJF2 176 aa10.72□□□□□ -0.69
SF3A3-203ENST00000461869 TSHBP01222 138 aa10.71□□□□□ -0.69
SF3A3-203ENST00000461869 LINC00694P0DN24 101 aa10.71□□□□□ -0.69
SF3A3-203ENST00000461869 GYPEP15421 78 aa10.71□□□□□ -0.69
SF3A3-203ENST00000461869 BTF3P20290 206 aaKnown RBP10.71□□□□□ -0.69
SF3A3-203ENST00000461869 Q8N1X5 172 aa10.71□□□□□ -0.69
SF3A3-203ENST00000461869 OR10D4PQ8NGN7 298 aa10.71□□□□□ -0.69
SF3A3-203ENST00000461869 CYSLTR1Q9Y271 337 aa10.71□□□□□ -0.69
SF3A3-203ENST00000461869 A0A096LNJ9 63 aa10.7□□□□□ -0.7
SF3A3-203ENST00000461869 SH2D6Q7Z4S9 175 aa10.7□□□□□ -0.7
SF3A3-203ENST00000461869 Q9UF83 564 aa10.7□□□□□ -0.7
SF3A3-203ENST00000461869 H3BNG1 76 aa10.69□□□□□ -0.7
SF3A3-203ENST00000461869 ATP5LO75964 103 aa10.69□□□□□ -0.7
SF3A3-203ENST00000461869 TOMM6Q96B49 74 aa10.69□□□□□ -0.7
SF3A3-203ENST00000461869 GTSF1LQ9H1H1 148 aa10.69□□□□□ -0.7
SF3A3-203ENST00000461869 TRAV26-1A0A087WT03 109 aa10.68□□□□□ -0.7
SF3A3-203ENST00000461869 LOC100131303A0A0U1RQF7 123 aa10.68□□□□□ -0.7
SF3A3-203ENST00000461869 CCL18P55774 89 aa10.68□□□□□ -0.7
SF3A3-203ENST00000461869 C2orf66Q6UXQ4 117 aa10.68□□□□□ -0.7
SF3A3-203ENST00000461869 MAP1LC3CQ9BXW4 147 aa10.68□□□□□ -0.7
SF3A3-203ENST00000461869 ICOSQ9Y6W8 199 aa10.68□□□□□ -0.7
SF3A3-203ENST00000461869 IGHV3-38A0A0C4DH36 116 aa10.67□□□□□ -0.7
SF3A3-203ENST00000461869 SMAGPQ0VAQ4 97 aa10.67□□□□□ -0.7
SF3A3-203ENST00000461869 MRPL23Q16540 153 aaKnown RBP10.67□□□□□ -0.7
SF3A3-203ENST00000461869 SPATA12Q7Z6I5 190 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms