RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 ZNF738Q8NE65 137 aa3.42□□□□□ -1.86
RIF1-207ENST00000454583 TM2D2Q9BX73 214 aa3.42□□□□□ -1.86
RIF1-207ENST00000454583 SUMO2P61956 95 aaKnown RBP3.42□□□□□ -1.86
RIF1-207ENST00000454583 RNASEKQ6P5S7 137 aaKnown RBP3.42□□□□□ -1.86
RIF1-207ENST00000454583 MAPKAPK5-AS1Q8N8E1 139 aa3.42□□□□□ -1.86
RIF1-207ENST00000454583 ZNRF2Q8NHG8 242 aa3.42□□□□□ -1.86
RIF1-207ENST00000454583 ZMAT5Q9UDW3 170 aaKnown RBP3.42□□□□□ -1.86
RIF1-207ENST00000454583 HSPB8Q9UJY1 196 aa3.42□□□□□ -1.86
RIF1-207ENST00000454583 LAGE3Q14657 143 aa3.42□□□□□ -1.86
RIF1-207ENST00000454583 NTM-AS1Q6ZSK4 140 aa3.42□□□□□ -1.86
RIF1-207ENST00000454583 OR10J6PQ8NGY7 276 aa3.42□□□□□ -1.86
RIF1-207ENST00000454583 VAMP8Q9BV40 100 aa3.42□□□□□ -1.86
RIF1-207ENST00000454583 CSTL1Q9H114 145 aa3.42□□□□□ -1.86
RIF1-207ENST00000454583 TIRAPP58753 221 aa3.41□□□□□ -1.86
RIF1-207ENST00000454583 TMSB15BA0A087X1C1 80 aa3.41□□□□□ -1.86
RIF1-207ENST00000454583 IGHV4-28A0A0C4DH34 117 aa3.41□□□□□ -1.86
RIF1-207ENST00000454583 MUC21A0A0G2JKD1 596 aa3.41□□□□□ -1.86
RIF1-207ENST00000454583 MUC21A0A140T8X8 626 aa3.41□□□□□ -1.86
RIF1-207ENST00000454583 SCGB1D1O95968 90 aa3.41□□□□□ -1.86
RIF1-207ENST00000454583 MIFP14174 115 aa3.41□□□□□ -1.86
RIF1-207ENST00000454583 ASIPP42127 132 aa3.41□□□□□ -1.86
RIF1-207ENST00000454583 TSPEAR-AS2P59090 65 aa3.41□□□□□ -1.86
RIF1-207ENST00000454583 MUC21Q5SSG8 566 aa3.41□□□□□ -1.86
RIF1-207ENST00000454583 IFI27L1Q96BM0 104 aa3.41□□□□□ -1.86
RIF1-207ENST00000454583 C16orf74Q96GX8 76 aa3.41□□□□□ -1.86
RIF1-207ENST00000454583 PAM16Q9Y3D7 125 aa3.41□□□□□ -1.86
RIF1-207ENST00000454583 PTTG1IPP53801 180 aa3.41□□□□□ -1.86
RIF1-207ENST00000454583 KRTDAPP60985 99 aa3.41□□□□□ -1.86
RIF1-207ENST00000454583 MAP1LC3AQ9H492 121 aa3.41□□□□□ -1.86
RIF1-207ENST00000454583 TRAV4A0A0B4J268 109 aa3.4□□□□□ -1.86
RIF1-207ENST00000454583 PCP4L1A6NKN8 68 aa3.4□□□□□ -1.86
RIF1-207ENST00000454583 HSBP1O75506 76 aa3.4□□□□□ -1.86
RIF1-207ENST00000454583 IGHV3-53P01767 116 aa3.4□□□□□ -1.86
RIF1-207ENST00000454583 SMIM17P0DL12 118 aa3.4□□□□□ -1.86
RIF1-207ENST00000454583 CKS2P33552 79 aa3.4□□□□□ -1.86
RIF1-207ENST00000454583 MRPS36P82909 103 aaKnown RBP3.4□□□□□ -1.86
RIF1-207ENST00000454583 DEFA6Q01524 100 aa3.4□□□□□ -1.86
RIF1-207ENST00000454583 RHOHQ15669 191 aa3.4□□□□□ -1.86
RIF1-207ENST00000454583 SYT8Q8NBV8 401 aa3.4□□□□□ -1.86
RIF1-207ENST00000454583 ORAOV1Q8WV07 137 aa3.4□□□□□ -1.86
RIF1-207ENST00000454583 CSDC2Q9Y534 153 aaKnown RBP3.4□□□□□ -1.86
RIF1-207ENST00000454583 TRAV26-1A0A087WT03 109 aa3.4□□□□□ -1.87
RIF1-207ENST00000454583 TRAV12-3A0A0B4J271 114 aa3.4□□□□□ -1.87
RIF1-207ENST00000454583 M0R143 59 aa3.4□□□□□ -1.87
RIF1-207ENST00000454583 INSP01308 110 aa3.4□□□□□ -1.87
RIF1-207ENST00000454583 ORM1P02763 201 aa3.4□□□□□ -1.87
RIF1-207ENST00000454583 ATOH7Q8N100 152 aa3.4□□□□□ -1.87
RIF1-207ENST00000454583 TIMM21Q9BVV7 248 aa3.4□□□□□ -1.87
RIF1-207ENST00000454583 MAP1LC3CQ9BXW4 147 aa3.4□□□□□ -1.87
RIF1-207ENST00000454583 RETNQ9HD89 108 aa3.4□□□□□ -1.87
RIF1-207ENST00000454583 UBE2D4Q9Y2X8 147 aa3.4□□□□□ -1.87
RIF1-207ENST00000454583 EPM2AB3EWF7 344 aa3.4□□□□□ -1.87
RIF1-207ENST00000454583 E9PLD3 99 aa3.4□□□□□ -1.87
RIF1-207ENST00000454583 FXYD7P58549 80 aa3.4□□□□□ -1.87
RIF1-207ENST00000454583 ERASQ7Z444 233 aa3.4□□□□□ -1.87
RIF1-207ENST00000454583 PMCHL2Q9BQD1 86 aa3.4□□□□□ -1.87
RIF1-207ENST00000454583 UPK3BQ9BT76 320 aa3.4□□□□□ -1.87
RIF1-207ENST00000454583 TMEM208Q9BTX3 173 aa3.4□□□□□ -1.87
RIF1-207ENST00000454583 CST9LQ9H4G1 147 aa3.4□□□□□ -1.87
RIF1-207ENST00000454583 C11orf86A6NJI1 115 aa3.39□□□□□ -1.87
RIF1-207ENST00000454583 LYRM9A8MSI8 78 aa3.39□□□□□ -1.87
RIF1-207ENST00000454583 K7EP13 123 aa3.39□□□□□ -1.87
RIF1-207ENST00000454583 M0R2P5 195 aa3.39□□□□□ -1.87
RIF1-207ENST00000454583 CIDEAO60543 219 aa3.39□□□□□ -1.87
RIF1-207ENST00000454583 UBE2D3P61077 147 aa3.39□□□□□ -1.87
RIF1-207ENST00000454583 UBE2D2P62837 147 aa3.39□□□□□ -1.87
RIF1-207ENST00000454583 PCP2Q8IVA1 136 aa3.39□□□□□ -1.87
RIF1-207ENST00000454583 C14orf178Q8N769 122 aaPredicted RBP3.39□□□□□ -1.87
RIF1-207ENST00000454583 C3orf56Q8N813 242 aa3.39□□□□□ -1.87
RIF1-207ENST00000454583 SPXQ9BT56 116 aa3.39□□□□□ -1.87
RIF1-207ENST00000454583 GTSF1LQ9H1H1 148 aa3.39□□□□□ -1.87
RIF1-207ENST00000454583 CDIP1Q9H305 208 aa3.39□□□□□ -1.87
RIF1-207ENST00000454583 F5H768 121 aa3.39□□□□□ -1.87
RIF1-207ENST00000454583 TCAPO15273 167 aa3.39□□□□□ -1.87
RIF1-207ENST00000454583 Q6ZRN7 208 aaPredicted RBP3.39□□□□□ -1.87
RIF1-207ENST00000454583 C20orf203Q8NBC4 194 aa3.39□□□□□ -1.87
RIF1-207ENST00000454583 AP1S3Q96PC3 154 aa3.39□□□□□ -1.87
RIF1-207ENST00000454583 SPANXB1Q9NS25 103 aaPredicted RBP3.39□□□□□ -1.87
RIF1-207ENST00000454583 APLNQ9ULZ1 77 aa3.39□□□□□ -1.87
RIF1-207ENST00000454583 COX11Q9Y6N1 276 aa3.39□□□□□ -1.87
RIF1-207ENST00000454583 ABCA13Q86UQ4 5058 aa3.39□□□□□ -1.87
RIF1-207ENST00000454583 IGLV4-3A0A075B6K6 122 aa3.38□□□□□ -1.87
RIF1-207ENST00000454583 TMEM223A0PJW6 202 aa3.38□□□□□ -1.87
RIF1-207ENST00000454583 F8VRH5 84 aa3.38□□□□□ -1.87
RIF1-207ENST00000454583 ATP5LO75964 103 aa3.38□□□□□ -1.87
RIF1-207ENST00000454583 UBE2D1P51668 147 aa3.38□□□□□ -1.87
RIF1-207ENST00000454583 ORMDL2Q53FV1 153 aa3.38□□□□□ -1.87
RIF1-207ENST00000454583 Q6ZTI0 123 aa3.38□□□□□ -1.87
RIF1-207ENST00000454583 MRPL35Q9NZE8 188 aaKnown RBP3.38□□□□□ -1.87
RIF1-207ENST00000454583 HERC2O95714 4834 aa3.38□□□□□ -1.87
RIF1-207ENST00000454583 IGLV5-39A0A0G2JS06 123 aa3.38□□□□□ -1.87
RIF1-207ENST00000454583 TRBV6-4A0A1B0GX49 114 aa3.38□□□□□ -1.87
RIF1-207ENST00000454583 LINC01549A6NIU2 74 aa3.38□□□□□ -1.87
RIF1-207ENST00000454583 TMEM141Q96I45 108 aa3.38□□□□□ -1.87
RIF1-207ENST00000454583 ZNF479Q96JC4 524 aa3.38□□□□□ -1.87
RIF1-207ENST00000454583 DNAJC30Q96LL9 226 aa3.38□□□□□ -1.87
RIF1-207ENST00000454583 PRO0461Q9UI25 63 aa3.38□□□□□ -1.87
RIF1-207ENST00000454583 PPP1R17O96001 155 aa3.38□□□□□ -1.87
RIF1-207ENST00000454583 SSTP61278 116 aa3.38□□□□□ -1.87
RIF1-207ENST00000454583 MPV17L2Q567V2 206 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 185.1 ms