RNA–Protein interactions for RNA: ENST00000453216.1

TRAM2-AS1-201, Transcript of TRAM2 antisense RNA 1 (head to head), humanhuman

TSL 3 BASIC

Gene TRAM2-AS1, Length 664 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM2-AS1-201ENST00000453216 TWIST1Q15672 202 aa16.85■□□□□ 0.29
TRAM2-AS1-201ENST00000453216 AMTP48728 403 aa16.84■□□□□ 0.29
TRAM2-AS1-201ENST00000453216 COTL1Q14019 142 aa16.84■□□□□ 0.29
TRAM2-AS1-201ENST00000453216 GFRA4Q9GZZ7 299 aa16.84■□□□□ 0.29
TRAM2-AS1-201ENST00000453216 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.84■□□□□ 0.29
TRAM2-AS1-201ENST00000453216 hDV102S1A0JD36 115 aa16.83■□□□□ 0.28
TRAM2-AS1-201ENST00000453216 OXTP01178 125 aa16.83■□□□□ 0.28
TRAM2-AS1-201ENST00000453216 SDIM1Q6ZPB5 146 aa16.83■□□□□ 0.28
TRAM2-AS1-201ENST00000453216 CNFNQ9BYD5 112 aa16.83■□□□□ 0.28
TRAM2-AS1-201ENST00000453216 RPP21Q9H633 154 aaKnown RBP16.83■□□□□ 0.28
TRAM2-AS1-201ENST00000453216 FAT3Q8TDW7 4589 aa16.83■□□□□ 0.28
TRAM2-AS1-201ENST00000453216 CNBPP62633 177 aaKnown RBP16.82■□□□□ 0.28
TRAM2-AS1-201ENST00000453216 RNASE7Q9H1E1 156 aaKnown RBP16.82■□□□□ 0.28
TRAM2-AS1-201ENST00000453216 PKHD1L1Q86WI1 4243 aa16.81■□□□□ 0.28
TRAM2-AS1-201ENST00000453216 PANO1I0J062 215 aa16.8■□□□□ 0.28
TRAM2-AS1-201ENST00000453216 K7EN84 100 aa16.8■□□□□ 0.28
TRAM2-AS1-201ENST00000453216 GATD1Q8NB37 220 aa16.8■□□□□ 0.28
TRAM2-AS1-201ENST00000453216 OCC1Q8TAD7 63 aa16.8■□□□□ 0.28
TRAM2-AS1-201ENST00000453216 AP5S1Q9NUS5 200 aa16.79■□□□□ 0.28
TRAM2-AS1-201ENST00000453216 TRAV26-2A0A0B4J265 109 aa16.77■□□□□ 0.28
TRAM2-AS1-201ENST00000453216 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.76■□□□□ 0.27
TRAM2-AS1-201ENST00000453216 SMIM15Q7Z3B0 74 aa16.76■□□□□ 0.27
TRAM2-AS1-201ENST00000453216 IGHV3-64A0A075B6Q5 118 aa16.75■□□□□ 0.27
TRAM2-AS1-201ENST00000453216 SERTAD4-AS1Q5TG53 156 aa16.75■□□□□ 0.27
TRAM2-AS1-201ENST00000453216 GTSF1Q8WW33 167 aa16.75■□□□□ 0.27
TRAM2-AS1-201ENST00000453216 SLPIP03973 132 aa16.73■□□□□ 0.27
TRAM2-AS1-201ENST00000453216 HNRNPA3P51991 378 aaKnown RBP16.73■□□□□ 0.27
TRAM2-AS1-201ENST00000453216 CIRBPQ14011 172 aaKnown RBP16.73■□□□□ 0.27
TRAM2-AS1-201ENST00000453216 RPL39LQ96EH5 51 aaKnown RBP16.73■□□□□ 0.27
TRAM2-AS1-201ENST00000453216 IGKV3OR2-268A0A0C4DH90 116 aa16.72■□□□□ 0.27
TRAM2-AS1-201ENST00000453216 GAGE12HA6NDE8 117 aa16.72■□□□□ 0.27
TRAM2-AS1-201ENST00000453216 NCR2O95944 276 aa16.72■□□□□ 0.27
TRAM2-AS1-201ENST00000453216 AMMECR1LQ6DCA0 310 aa16.72■□□□□ 0.27
TRAM2-AS1-201ENST00000453216 TMEM250H0YL14 139 aa16.71■□□□□ 0.27
TRAM2-AS1-201ENST00000453216 GATCO43716 136 aaKnown RBP16.71■□□□□ 0.27
TRAM2-AS1-201ENST00000453216 FOXA3P55318 350 aaPredicted RBP16.71■□□□□ 0.27
TRAM2-AS1-201ENST00000453216 CFAP161Q6P656 301 aa16.71■□□□□ 0.27
TRAM2-AS1-201ENST00000453216 TEX261Q6UWH6 196 aa16.71■□□□□ 0.27
TRAM2-AS1-201ENST00000453216 Q6ZNX1 250 aa16.71■□□□□ 0.27
TRAM2-AS1-201ENST00000453216 DPH3Q96FX2 82 aa16.71■□□□□ 0.27
TRAM2-AS1-201ENST00000453216 APCSP02743 223 aa16.69■□□□□ 0.26
TRAM2-AS1-201ENST00000453216 BLOC1S1P78537 153 aa16.69■□□□□ 0.26
TRAM2-AS1-201ENST00000453216 RNASEKQ6P5S7 137 aaKnown RBP16.69■□□□□ 0.26
TRAM2-AS1-201ENST00000453216 C15orf56Q8N910 161 aa16.69■□□□□ 0.26
TRAM2-AS1-201ENST00000453216 RNF185Q96GF1 192 aa16.69■□□□□ 0.26
TRAM2-AS1-201ENST00000453216 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.68■□□□□ 0.26
TRAM2-AS1-201ENST00000453216 IGKV2-29A2NJV5 120 aaPredicted RBP16.68■□□□□ 0.26
TRAM2-AS1-201ENST00000453216 SDHAF1A6NFY7 115 aa16.68■□□□□ 0.26
TRAM2-AS1-201ENST00000453216 A8MWL6 223 aa16.68■□□□□ 0.26
TRAM2-AS1-201ENST00000453216 H7C423 109 aa16.68■□□□□ 0.26
TRAM2-AS1-201ENST00000453216 ALKAL2Q6UX46 152 aa16.68■□□□□ 0.26
TRAM2-AS1-201ENST00000453216 FAM231DQ6ZW35 169 aa16.68■□□□□ 0.26
TRAM2-AS1-201ENST00000453216 CHTF8P0CG12 524 aa16.67■□□□□ 0.26
TRAM2-AS1-201ENST00000453216 HMCN2Q8NDA2 5059 aa16.67■□□□□ 0.26
TRAM2-AS1-201ENST00000453216 A0A087WYN8 130 aa16.66■□□□□ 0.26
TRAM2-AS1-201ENST00000453216 CEBPGP53567 150 aa16.66■□□□□ 0.26
TRAM2-AS1-201ENST00000453216 SPACA4Q8TDM5 124 aa16.66■□□□□ 0.26
TRAM2-AS1-201ENST00000453216 CHCHD10Q8WYQ3 142 aaPredicted RBP16.66■□□□□ 0.26
TRAM2-AS1-201ENST00000453216 FGF6P10767 208 aa16.65■□□□□ 0.26
TRAM2-AS1-201ENST00000453216 AKAP14Q86UN6 197 aa16.65■□□□□ 0.26
TRAM2-AS1-201ENST00000453216 PMCHP20382 165 aa16.64■□□□□ 0.25
TRAM2-AS1-201ENST00000453216 HIGD2BQ4VC39 106 aa16.64■□□□□ 0.25
TRAM2-AS1-201ENST00000453216 CT83Q5H943 113 aa16.64■□□□□ 0.25
TRAM2-AS1-201ENST00000453216 I3L3M4 83 aa16.63■□□□□ 0.25
TRAM2-AS1-201ENST00000453216 RPS10P46783 165 aaKnown RBP16.63■□□□□ 0.25
TRAM2-AS1-201ENST00000453216 LYPD6BQ8NI32 183 aa16.63■□□□□ 0.25
TRAM2-AS1-201ENST00000453216 BORCS7Q96B45 105 aa16.63■□□□□ 0.25
TRAM2-AS1-201ENST00000453216 TRBV6-5A0A0K0K1A5 114 aa16.62■□□□□ 0.25
TRAM2-AS1-201ENST00000453216 ZNF25P17030 456 aaPredicted RBP16.62■□□□□ 0.25
TRAM2-AS1-201ENST00000453216 COX6A2Q02221 97 aa16.6■□□□□ 0.25
TRAM2-AS1-201ENST00000453216 OR5A1Q8NGJ0 315 aa16.6■□□□□ 0.25
TRAM2-AS1-201ENST00000453216 TMEM101Q96IK0 257 aa16.6■□□□□ 0.25
TRAM2-AS1-201ENST00000453216 BTF3L4Q96K17 158 aa16.6■□□□□ 0.25
TRAM2-AS1-201ENST00000453216 PLAC8Q9NZF1 115 aa16.6■□□□□ 0.25
TRAM2-AS1-201ENST00000453216 FAM231BA6NCW3 169 aa16.59■□□□□ 0.25
TRAM2-AS1-201ENST00000453216 SMIM7Q9BQ49 75 aa16.59■□□□□ 0.25
TRAM2-AS1-201ENST00000453216 ST20Q9HBF5 79 aa16.59■□□□□ 0.25
TRAM2-AS1-201ENST00000453216 GVQW2A0A096LPI5 108 aaPredicted RBP16.58■□□□□ 0.24
TRAM2-AS1-201ENST00000453216 FOXI1Q12951 378 aa16.58■□□□□ 0.24
TRAM2-AS1-201ENST00000453216 Q6ZRU5 148 aa16.58■□□□□ 0.24
TRAM2-AS1-201ENST00000453216 EIF5A2Q9GZV4 153 aaKnown RBP16.58■□□□□ 0.24
TRAM2-AS1-201ENST00000453216 A0A1B0GUT8 65 aa16.57■□□□□ 0.24
TRAM2-AS1-201ENST00000453216 NDUFS6O75380 124 aaKnown RBP16.57■□□□□ 0.24
TRAM2-AS1-201ENST00000453216 GAS8-AS1O95177 125 aa16.57■□□□□ 0.24
TRAM2-AS1-201ENST00000453216 TSKUQ8WUA8 353 aa16.57■□□□□ 0.24
TRAM2-AS1-201ENST00000453216 PLA2G2DQ9UNK4 145 aa16.57■□□□□ 0.24
TRAM2-AS1-201ENST00000453216 hCG_2014768A0A024R1R8 64 aa16.56■□□□□ 0.24
TRAM2-AS1-201ENST00000453216 HIGD1CA8MV81 97 aa16.56■□□□□ 0.24
TRAM2-AS1-201ENST00000453216 TSHBP01222 138 aa16.56■□□□□ 0.24
TRAM2-AS1-201ENST00000453216 ESDP10768 282 aa16.56■□□□□ 0.24
TRAM2-AS1-201ENST00000453216 XCL1P47992 114 aa16.56■□□□□ 0.24
TRAM2-AS1-201ENST00000453216 LINC01551Q86U37 167 aa16.56■□□□□ 0.24
TRAM2-AS1-201ENST00000453216 PRSS3P2Q8NHM4 247 aa16.56■□□□□ 0.24
TRAM2-AS1-201ENST00000453216 FAM210AQ96ND0 272 aa16.56■□□□□ 0.24
TRAM2-AS1-201ENST00000453216 TMEM191AQ9H0A3 160 aa16.56■□□□□ 0.24
TRAM2-AS1-201ENST00000453216 TMEM242Q9NWH2 141 aa16.56■□□□□ 0.24
TRAM2-AS1-201ENST00000453216 C7orf33Q8WU49 177 aa16.55■□□□□ 0.24
TRAM2-AS1-201ENST00000453216 MRAP2Q96G30 205 aa16.55■□□□□ 0.24
TRAM2-AS1-201ENST00000453216 IGKV2-24A0A0C4DH68 120 aa16.54■□□□□ 0.24
TRAM2-AS1-201ENST00000453216 LINC00959A0A1B0GUT2 108 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms