RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 NUP35Q8NFH5 326 aa9.75□□□□□ -0.85
USP39-206ENST00000448971 RPL39LQ96EH5 51 aaKnown RBP9.75□□□□□ -0.85
USP39-206ENST00000448971 GAGE6Q13070 117 aa9.74□□□□□ -0.85
USP39-206ENST00000448971 COTL1Q14019 142 aa9.74□□□□□ -0.85
USP39-206ENST00000448971 FRZBQ92765 325 aa9.74□□□□□ -0.85
USP39-206ENST00000448971 UBE2WQ96B02 151 aa9.74□□□□□ -0.85
USP39-206ENST00000448971 RMI2Q96E14 147 aa9.74□□□□□ -0.85
USP39-206ENST00000448971 TM2D2Q9BX73 214 aa9.74□□□□□ -0.85
USP39-206ENST00000448971 TMEM191AQ9H0A3 160 aa9.74□□□□□ -0.85
USP39-206ENST00000448971 ANGP03950 147 aaKnown RBP9.73□□□□□ -0.85
USP39-206ENST00000448971 IFITM2Q01629 132 aa9.73□□□□□ -0.85
USP39-206ENST00000448971 IQCJQ1A5X6 159 aa9.73□□□□□ -0.85
USP39-206ENST00000448971 AMN1Q8IY45 258 aa9.73□□□□□ -0.85
USP39-206ENST00000448971 DEFB104AQ8WTQ1 72 aa9.73□□□□□ -0.85
USP39-206ENST00000448971 FLG2Q5D862 2391 aaPredicted RBP9.72□□□□□ -0.85
USP39-206ENST00000448971 IGKV2D-24A0A075B6R9 120 aa9.72□□□□□ -0.85
USP39-206ENST00000448971 SMIM27A0A1W2PRY6 76 aa9.72□□□□□ -0.85
USP39-206ENST00000448971 UBE2L6O14933 153 aa9.72□□□□□ -0.85
USP39-206ENST00000448971 AMTP48728 403 aa9.72□□□□□ -0.85
USP39-206ENST00000448971 PNRC1Q12796 327 aaPredicted RBP9.72□□□□□ -0.85
USP39-206ENST00000448971 Q8N976 141 aa9.72□□□□□ -0.85
USP39-206ENST00000448971 TMEM243Q9BU79 118 aa9.72□□□□□ -0.85
USP39-206ENST00000448971 SRRM2Q9UQ35 2752 aaKnown RBP9.71□□□□□ -0.85
USP39-206ENST00000448971 MYCBP2O75592 4640 aa9.71□□□□□ -0.85
USP39-206ENST00000448971 EPM2AB3EWF7 344 aa9.71□□□□□ -0.86
USP39-206ENST00000448971 ATRAIDQ6UW56 229 aa9.71□□□□□ -0.86
USP39-206ENST00000448971 COX11Q9Y6N1 276 aa9.71□□□□□ -0.86
USP39-206ENST00000448971 LOC100996750A0A140TA64 210 aa9.7□□□□□ -0.86
USP39-206ENST00000448971 SDHAF1A6NFY7 115 aa9.7□□□□□ -0.86
USP39-206ENST00000448971 PPP1R2P9O14990 202 aa9.7□□□□□ -0.86
USP39-206ENST00000448971 FUSP35637 526 aaKnown RBP eCLIP9.7□□□□□ -0.86
USP39-206ENST00000448971 CAMPP49913 170 aa9.7□□□□□ -0.86
USP39-206ENST00000448971 RBX1P62877 108 aa9.7□□□□□ -0.86
USP39-206ENST00000448971 Q0VG73 95 aa9.7□□□□□ -0.86
USP39-206ENST00000448971 MRPL54Q6P161 138 aaKnown RBP9.7□□□□□ -0.86
USP39-206ENST00000448971 CLPSL2Q6UWE3 100 aa9.7□□□□□ -0.86
USP39-206ENST00000448971 MRAP2Q96G30 205 aa9.7□□□□□ -0.86
USP39-206ENST00000448971 RNF185Q96GF1 192 aa9.7□□□□□ -0.86
USP39-206ENST00000448971 KRTAP4-6Q9BYQ5 205 aa9.7□□□□□ -0.86
USP39-206ENST00000448971 TMA7Q9Y2S6 64 aaKnown RBP9.7□□□□□ -0.86
USP39-206ENST00000448971 VPS13BQ7Z7G8 4022 aa9.7□□□□□ -0.86
USP39-206ENST00000448971 A0A1B0GW15 77 aa9.69□□□□□ -0.86
USP39-206ENST00000448971 NCR2O95944 276 aa9.69□□□□□ -0.86
USP39-206ENST00000448971 APCSP02743 223 aa9.69□□□□□ -0.86
USP39-206ENST00000448971 RAB4AP20338 218 aa9.69□□□□□ -0.86
USP39-206ENST00000448971 XGP55808 180 aa9.69□□□□□ -0.86
USP39-206ENST00000448971 C1orf43Q9BWL3 253 aa9.69□□□□□ -0.86
USP39-206ENST00000448971 ST20Q9HBF5 79 aa9.69□□□□□ -0.86
USP39-206ENST00000448971 LRCOL1A6NCL2 159 aa9.68□□□□□ -0.86
USP39-206ENST00000448971 GAS8-AS1O95177 125 aa9.68□□□□□ -0.86
USP39-206ENST00000448971 S100A8P05109 93 aa9.68□□□□□ -0.86
USP39-206ENST00000448971 INAFM2P0DMQ5 153 aa9.68□□□□□ -0.86
USP39-206ENST00000448971 HBBP68871 147 aa9.68□□□□□ -0.86
USP39-206ENST00000448971 UQCC3Q6UW78 93 aa9.68□□□□□ -0.86
USP39-206ENST00000448971 TRBV6-5A0A0K0K1A5 114 aa9.67□□□□□ -0.86
USP39-206ENST00000448971 SMKR1H3BMG3 65 aa9.67□□□□□ -0.86
USP39-206ENST00000448971 LECT2O14960 151 aa9.67□□□□□ -0.86
USP39-206ENST00000448971 MT-ND4LP03901 98 aa9.67□□□□□ -0.86
USP39-206ENST00000448971 PMCHP20382 165 aa9.67□□□□□ -0.86
USP39-206ENST00000448971 RPS10P46783 165 aaKnown RBP9.67□□□□□ -0.86
USP39-206ENST00000448971 ANKRD39Q53RE8 183 aa9.67□□□□□ -0.86
USP39-206ENST00000448971 COMMD7Q86VX2 200 aa9.67□□□□□ -0.86
USP39-206ENST00000448971 Q8N814 137 aa9.67□□□□□ -0.86
USP39-206ENST00000448971 IGLV5-52A0A0A0MRZ9 124 aa9.66□□□□□ -0.86
USP39-206ENST00000448971 F8W036 122 aa9.66□□□□□ -0.86
USP39-206ENST00000448971 I3L3M4 83 aa9.66□□□□□ -0.86
USP39-206ENST00000448971 MIAQ16674 131 aa9.66□□□□□ -0.86
USP39-206ENST00000448971 ENHOQ6UWT2 76 aa9.66□□□□□ -0.86
USP39-206ENST00000448971 LINC00269Q8N2A0 174 aa9.66□□□□□ -0.86
USP39-206ENST00000448971 TMEM242Q9NWH2 141 aa9.66□□□□□ -0.86
USP39-206ENST00000448971 HLA-DQA1P01909 254 aa9.65□□□□□ -0.86
USP39-206ENST00000448971 ADCYAP1P18509 176 aa9.65□□□□□ -0.86
USP39-206ENST00000448971 WFDC2Q14508 124 aa9.65□□□□□ -0.86
USP39-206ENST00000448971 FAM104BQ5XKR9 115 aa9.65□□□□□ -0.86
USP39-206ENST00000448971 AMMECR1LQ6DCA0 310 aa9.65□□□□□ -0.86
USP39-206ENST00000448971 BAALCQ8WXS3 180 aa9.65□□□□□ -0.86
USP39-206ENST00000448971 TMEM70Q9BUB7 260 aa9.65□□□□□ -0.86
USP39-206ENST00000448971 IGLV4-60A0A075B6I1 120 aa9.64□□□□□ -0.87
USP39-206ENST00000448971 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.64□□□□□ -0.87
USP39-206ENST00000448971 A0A1B0GXF2 115 aa9.64□□□□□ -0.87
USP39-206ENST00000448971 IGKV2-29A2NJV5 120 aaPredicted RBP9.64□□□□□ -0.87
USP39-206ENST00000448971 PPP1R17O96001 155 aa9.64□□□□□ -0.87
USP39-206ENST00000448971 REG3AQ06141 175 aa9.64□□□□□ -0.87
USP39-206ENST00000448971 MRPL51Q4U2R6 128 aaKnown RBP9.64□□□□□ -0.87
USP39-206ENST00000448971 ATP5L2Q7Z4Y8 100 aa9.64□□□□□ -0.87
USP39-206ENST00000448971 C20orf203Q8NBC4 194 aa9.64□□□□□ -0.87
USP39-206ENST00000448971 NTN5Q8WTR8 489 aaPredicted RBP9.64□□□□□ -0.87
USP39-206ENST00000448971 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.63□□□□□ -0.87
USP39-206ENST00000448971 TMEM218A2RU14 115 aa9.63□□□□□ -0.87
USP39-206ENST00000448971 CKS2P33552 79 aa9.63□□□□□ -0.87
USP39-206ENST00000448971 RNASEKQ6P5S7 137 aaKnown RBP9.63□□□□□ -0.87
USP39-206ENST00000448971 PRR34Q9NV39 138 aa9.63□□□□□ -0.87
USP39-206ENST00000448971 IGLV10-54A0A075B6I4 117 aa9.62□□□□□ -0.87
USP39-206ENST00000448971 A0A1B0GUV1 79 aa9.62□□□□□ -0.87
USP39-206ENST00000448971 TSHBP01222 138 aa9.62□□□□□ -0.87
USP39-206ENST00000448971 FCER1GP30273 86 aa9.62□□□□□ -0.87
USP39-206ENST00000448971 SUMO2P61956 95 aaKnown RBP9.62□□□□□ -0.87
USP39-206ENST00000448971 Q5VSD8 79 aa9.62□□□□□ -0.87
USP39-206ENST00000448971 IGKV3OR2-268A0A0C4DH90 116 aa9.61□□□□□ -0.87
USP39-206ENST00000448971 TRBV27A0A0K0K1C4 114 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms