RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 DEFB104AQ8WTQ1 72 aa12.83□□□□□ -0.36
VCP-203ENST00000448530 EIF5A2Q9GZV4 153 aaKnown RBP12.83□□□□□ -0.36
VCP-203ENST00000448530 IGLV10-54A0A075B6I4 117 aa12.82□□□□□ -0.36
VCP-203ENST00000448530 TRAV8-4A0A0B4J246 113 aa12.82□□□□□ -0.36
VCP-203ENST00000448530 FAM231DQ6ZW35 169 aa12.82□□□□□ -0.36
VCP-203ENST00000448530 GATD1Q8NB37 220 aa12.82□□□□□ -0.36
VCP-203ENST00000448530 GTSF1Q8WW33 167 aa12.82□□□□□ -0.36
VCP-203ENST00000448530 BORCS7Q96B45 105 aa12.82□□□□□ -0.36
VCP-203ENST00000448530 VPS13BQ7Z7G8 4022 aa12.82□□□□□ -0.36
VCP-203ENST00000448530 TRAV26-2A0A0B4J265 109 aa12.81□□□□□ -0.36
VCP-203ENST00000448530 DGAT2L7PQ6IED9 249 aa12.81□□□□□ -0.36
VCP-203ENST00000448530 TEX261Q6UWH6 196 aa12.81□□□□□ -0.36
VCP-203ENST00000448530 C20orf203Q8NBC4 194 aa12.81□□□□□ -0.36
VCP-203ENST00000448530 PRSS1P07477 247 aa12.8□□□□□ -0.36
VCP-203ENST00000448530 SMIM7Q9BQ49 75 aa12.8□□□□□ -0.36
VCP-203ENST00000448530 IGLV4-60A0A075B6I1 120 aa12.79□□□□□ -0.36
VCP-203ENST00000448530 KRTAP26-1Q6PEX3 210 aa12.79□□□□□ -0.36
VCP-203ENST00000448530 CLRN3Q8NCR9 226 aa12.79□□□□□ -0.36
VCP-203ENST00000448530 DNAH8Q96JB1 4490 aa12.78□□□□□ -0.36
VCP-203ENST00000448530 CT83Q5H943 113 aa12.78□□□□□ -0.36
VCP-203ENST00000448530 CIRBP-AS1Q8TBR5 109 aa12.78□□□□□ -0.36
VCP-203ENST00000448530 ZNF727A8MUV8 499 aa12.77□□□□□ -0.37
VCP-203ENST00000448530 NCR2O95944 276 aa12.77□□□□□ -0.37
VCP-203ENST00000448530 FOXA3P55318 350 aaPredicted RBP12.77□□□□□ -0.37
VCP-203ENST00000448530 AMMECR1LQ6DCA0 310 aa12.77□□□□□ -0.37
VCP-203ENST00000448530 RPL39LQ96EH5 51 aaKnown RBP12.77□□□□□ -0.37
VCP-203ENST00000448530 NDUFS6O75380 124 aaKnown RBP12.76□□□□□ -0.37
VCP-203ENST00000448530 FAM210AQ96ND0 272 aa12.76□□□□□ -0.37
VCP-203ENST00000448530 GFRA4Q9GZZ7 299 aa12.76□□□□□ -0.37
VCP-203ENST00000448530 hDV102S1A0JD36 115 aa12.75□□□□□ -0.37
VCP-203ENST00000448530 APCSP02743 223 aa12.75□□□□□ -0.37
VCP-203ENST00000448530 LINC01551Q86U37 167 aa12.75□□□□□ -0.37
VCP-203ENST00000448530 C9orf163Q8N9P6 203 aa12.75□□□□□ -0.37
VCP-203ENST00000448530 AP5S1Q9NUS5 200 aa12.75□□□□□ -0.37
VCP-203ENST00000448530 SDHAF1A6NFY7 115 aa12.74□□□□□ -0.37
VCP-203ENST00000448530 J3QL48 77 aa12.74□□□□□ -0.37
VCP-203ENST00000448530 TSKUQ8WUA8 353 aa12.74□□□□□ -0.37
VCP-203ENST00000448530 IGKV3OR2-268A0A0C4DH90 116 aa12.73□□□□□ -0.37
VCP-203ENST00000448530 A0A1B0GUT8 65 aa12.73□□□□□ -0.37
VCP-203ENST00000448530 PMCHP20382 165 aa12.73□□□□□ -0.37
VCP-203ENST00000448530 RNASEKQ6P5S7 137 aaKnown RBP12.73□□□□□ -0.37
VCP-203ENST00000448530 HIGD1CA8MV81 97 aa12.72□□□□□ -0.37
VCP-203ENST00000448530 H7C423 109 aa12.72□□□□□ -0.37
VCP-203ENST00000448530 SRP19P09132 144 aaKnown RBP12.72□□□□□ -0.37
VCP-203ENST00000448530 OSTCQ9NRP0 149 aa12.72□□□□□ -0.37
VCP-203ENST00000448530 MYCBP2O75592 4640 aa12.72□□□□□ -0.37
VCP-203ENST00000448530 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.71□□□□□ -0.37
VCP-203ENST00000448530 FAM231BA6NCW3 169 aa12.71□□□□□ -0.37
VCP-203ENST00000448530 I3L3M4 83 aa12.71□□□□□ -0.37
VCP-203ENST00000448530 HERC1Q15751 4861 aa12.71□□□□□ -0.38
VCP-203ENST00000448530 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.7□□□□□ -0.38
VCP-203ENST00000448530 IGKV2-29A2NJV5 120 aaPredicted RBP12.7□□□□□ -0.38
VCP-203ENST00000448530 GAGE12HA6NDE8 117 aa12.7□□□□□ -0.38
VCP-203ENST00000448530 CNBPP62633 177 aaKnown RBP12.7□□□□□ -0.38
VCP-203ENST00000448530 CFAP161Q6P656 301 aa12.7□□□□□ -0.38
VCP-203ENST00000448530 TMEM191AQ9H0A3 160 aa12.7□□□□□ -0.38
VCP-203ENST00000448530 ST20Q9HBF5 79 aa12.7□□□□□ -0.38
VCP-203ENST00000448530 TRBV6-5A0A0K0K1A5 114 aa12.69□□□□□ -0.38
VCP-203ENST00000448530 FGF6P10767 208 aa12.69□□□□□ -0.38
VCP-203ENST00000448530 TMEM101Q96IK0 257 aa12.69□□□□□ -0.38
VCP-203ENST00000448530 BTF3L4Q96K17 158 aa12.69□□□□□ -0.38
VCP-203ENST00000448530 A0A1B0GVG6 124 aa12.68□□□□□ -0.38
VCP-203ENST00000448530 ZNF25P17030 456 aaPredicted RBP12.68□□□□□ -0.38
VCP-203ENST00000448530 RIGQ13278 110 aa12.68□□□□□ -0.38
VCP-203ENST00000448530 TMEM241Q24JQ0 296 aa12.68□□□□□ -0.38
VCP-203ENST00000448530 FAM74A3Q4VXF1 159 aa12.68□□□□□ -0.38
VCP-203ENST00000448530 SDIM1Q6ZPB5 146 aa12.68□□□□□ -0.38
VCP-203ENST00000448530 IGHV3-64A0A075B6Q5 118 aa12.67□□□□□ -0.38
VCP-203ENST00000448530 MRAP2Q96G30 205 aa12.67□□□□□ -0.38
VCP-203ENST00000448530 CHCHD10Q8WYQ3 142 aaPredicted RBP12.66□□□□□ -0.38
VCP-203ENST00000448530 DPH3Q96FX2 82 aa12.66□□□□□ -0.38
VCP-203ENST00000448530 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.66□□□□□ -0.38
VCP-203ENST00000448530 RAB4AP20338 218 aa12.65□□□□□ -0.38
VCP-203ENST00000448530 RPL37AP61513 92 aaKnown RBP12.65□□□□□ -0.38
VCP-203ENST00000448530 AMN1Q8IY45 258 aa12.65□□□□□ -0.38
VCP-203ENST00000448530 ISOC2Q96AB3 205 aa12.65□□□□□ -0.38
VCP-203ENST00000448530 TMEM242Q9NWH2 141 aa12.65□□□□□ -0.38
VCP-203ENST00000448530 V9GYV3 84 aa12.65□□□□□ -0.38
VCP-203ENST00000448530 KRTAP29-1A8MX34 341 aaPredicted RBP12.64□□□□□ -0.39
VCP-203ENST00000448530 GAS8-AS1O95177 125 aa12.64□□□□□ -0.39
VCP-203ENST00000448530 TSHBP01222 138 aa12.64□□□□□ -0.39
VCP-203ENST00000448530 ADIRFQ15847 76 aa12.64□□□□□ -0.39
VCP-203ENST00000448530 OR5A1Q8NGJ0 315 aa12.64□□□□□ -0.39
VCP-203ENST00000448530 RNF185Q96GF1 192 aa12.64□□□□□ -0.39
VCP-203ENST00000448530 NAT8BQ9UHF3 227 aa12.64□□□□□ -0.39
VCP-203ENST00000448530 PPP1R17O96001 155 aa12.63□□□□□ -0.39
VCP-203ENST00000448530 RPL23P62829 140 aaKnown RBP12.63□□□□□ -0.39
VCP-203ENST00000448530 PEA15Q15121 130 aa12.63□□□□□ -0.39
VCP-203ENST00000448530 C15orf56Q8N910 161 aa12.63□□□□□ -0.39
VCP-203ENST00000448530 NUP35Q8NFH5 326 aa12.63□□□□□ -0.39
VCP-203ENST00000448530 ESDP10768 282 aa12.62□□□□□ -0.39
VCP-203ENST00000448530 RPS10P46783 165 aaKnown RBP12.62□□□□□ -0.39
VCP-203ENST00000448530 KRTAP10-4P60372 401 aaPredicted RBP12.62□□□□□ -0.39
VCP-203ENST00000448530 NAT8Q9UHE5 227 aa12.62□□□□□ -0.39
VCP-203ENST00000448530 TRBV27A0A0K0K1C4 114 aa12.61□□□□□ -0.39
VCP-203ENST00000448530 PANO1I0J062 215 aa12.61□□□□□ -0.39
VCP-203ENST00000448530 SLPIP03973 132 aa12.61□□□□□ -0.39
VCP-203ENST00000448530 FCER1GP30273 86 aa12.61□□□□□ -0.39
VCP-203ENST00000448530 POLR2KP53803 58 aaKnown RBP12.61□□□□□ -0.39
VCP-203ENST00000448530 HIGD2BQ4VC39 106 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 454.6 ms