RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 FAAP20Q6NZ36 180 aa1.7□□□□□ -2.14
PMS1-215ENST00000447232 MIR17HGQ75NE6 70 aa1.7□□□□□ -2.14
PMS1-215ENST00000447232 TMEM229BQ8NBD8 167 aa1.7□□□□□ -2.14
PMS1-215ENST00000447232 LYRM2Q9NU23 88 aaPredicted RBP1.7□□□□□ -2.14
PMS1-215ENST00000447232 WDR83OSQ9Y284 106 aa1.7□□□□□ -2.14
PMS1-215ENST00000447232 ARMS2P0C7Q2 107 aa1.7□□□□□ -2.14
PMS1-215ENST00000447232 TLX1NBP0CAT3 122 aa1.7□□□□□ -2.14
PMS1-215ENST00000447232 PAPPA-AS1Q5QFB9 102 aa1.7□□□□□ -2.14
PMS1-215ENST00000447232 GOLT1AQ6ZVE7 132 aa1.7□□□□□ -2.14
PMS1-215ENST00000447232 C3orf22Q8N5N4 141 aa1.7□□□□□ -2.14
PMS1-215ENST00000447232 OR5A1Q8NGJ0 315 aa1.7□□□□□ -2.14
PMS1-215ENST00000447232 C2orf48Q96LS8 159 aa1.7□□□□□ -2.14
PMS1-215ENST00000447232 CAMK2N2Q96S95 79 aa1.7□□□□□ -2.14
PMS1-215ENST00000447232 NMES1Q9C002 83 aa1.7□□□□□ -2.14
PMS1-215ENST00000447232 OBSCNQ5VST9 7968 aa1.69□□□□□ -2.14
PMS1-215ENST00000447232 BCL2L11O43521 198 aa1.69□□□□□ -2.14
PMS1-215ENST00000447232 ANXA3P12429 323 aa1.69□□□□□ -2.14
PMS1-215ENST00000447232 FGF7P21781 194 aa1.69□□□□□ -2.14
PMS1-215ENST00000447232 XCL1P47992 114 aa1.69□□□□□ -2.14
PMS1-215ENST00000447232 GABARAPL2P60520 117 aa1.69□□□□□ -2.14
PMS1-215ENST00000447232 KRTAP13-1Q8IUC0 172 aa1.69□□□□□ -2.14
PMS1-215ENST00000447232 PGLYRP4Q96LB8 373 aa1.69□□□□□ -2.14
PMS1-215ENST00000447232 SMIM31A0A1B0GVY4 71 aa1.69□□□□□ -2.14
PMS1-215ENST00000447232 M0R381 172 aa1.69□□□□□ -2.14
PMS1-215ENST00000447232 CCL25O15444 150 aa1.69□□□□□ -2.14
PMS1-215ENST00000447232 SSSCA1O60232 199 aa1.69□□□□□ -2.14
PMS1-215ENST00000447232 BCE1O60756 84 aa1.69□□□□□ -2.14
PMS1-215ENST00000447232 TSC22D2O75157 780 aa1.69□□□□□ -2.14
PMS1-215ENST00000447232 APOA1P02647 267 aa1.69□□□□□ -2.14
PMS1-215ENST00000447232 KRTAP10-10P60014 251 aa1.69□□□□□ -2.14
PMS1-215ENST00000447232 ZNF56Q15929 161 aa1.69□□□□□ -2.14
PMS1-215ENST00000447232 PRNTQ86SH4 94 aa1.69□□□□□ -2.14
PMS1-215ENST00000447232 OR2D3Q8NGH3 330 aa1.69□□□□□ -2.14
PMS1-215ENST00000447232 HYLS1Q96M11 299 aa1.69□□□□□ -2.14
PMS1-215ENST00000447232 NDFIP1Q9BT67 221 aa1.69□□□□□ -2.14
PMS1-215ENST00000447232 C11orf1Q9H5F2 150 aa1.69□□□□□ -2.14
PMS1-215ENST00000447232 OTORQ9NRC9 128 aa1.69□□□□□ -2.14
PMS1-215ENST00000447232 RSL24D1Q9UHA3 163 aaKnown RBP1.69□□□□□ -2.14
PMS1-215ENST00000447232 NDUFA12Q9UI09 145 aa1.69□□□□□ -2.14
PMS1-215ENST00000447232 TAS2R30P59541 319 aa1.68□□□□□ -2.14
PMS1-215ENST00000447232 SMUG1Q53HV7 270 aa1.68□□□□□ -2.14
PMS1-215ENST00000447232 CLVS1Q8IUQ0 354 aaPredicted RBP1.68□□□□□ -2.14
PMS1-215ENST00000447232 ZFP82Q8N141 532 aa1.68□□□□□ -2.14
PMS1-215ENST00000447232 SGK494Q96LW2 274 aa1.68□□□□□ -2.14
PMS1-215ENST00000447232 LITAFQ99732 161 aa1.68□□□□□ -2.14
PMS1-215ENST00000447232 MRPL35Q9NZE8 188 aaKnown RBP1.68□□□□□ -2.14
PMS1-215ENST00000447232 LINC00959A0A1B0GUT2 108 aa1.68□□□□□ -2.14
PMS1-215ENST00000447232 DISC1C4P0D8 188 aa1.68□□□□□ -2.14
PMS1-215ENST00000447232 UBE2L6O14933 153 aa1.68□□□□□ -2.14
PMS1-215ENST00000447232 SPINK1P00995 79 aa1.68□□□□□ -2.14
PMS1-215ENST00000447232 CTF1Q16619 201 aa1.68□□□□□ -2.14
PMS1-215ENST00000447232 CD164L2Q6UWJ8 174 aa1.68□□□□□ -2.14
PMS1-215ENST00000447232 Q8N377 158 aa1.68□□□□□ -2.14
PMS1-215ENST00000447232 FAM19A2Q8N3H0 131 aa1.68□□□□□ -2.14
PMS1-215ENST00000447232 CMTM2Q8TAZ6 248 aa1.68□□□□□ -2.14
PMS1-215ENST00000447232 IMMP2LQ96T52 175 aa1.68□□□□□ -2.14
PMS1-215ENST00000447232 PRRT1Q99946 306 aa1.68□□□□□ -2.14
PMS1-215ENST00000447232 ZNF471Q9BX82 626 aaPredicted RBP1.68□□□□□ -2.14
PMS1-215ENST00000447232 SMDT1Q9H4I9 107 aa1.68□□□□□ -2.14
PMS1-215ENST00000447232 TRAV34A0A0B4J273 112 aa1.67□□□□□ -2.14
PMS1-215ENST00000447232 B4DEV8 164 aa1.67□□□□□ -2.14
PMS1-215ENST00000447232 KRBOX1C9JBD0 128 aa1.67□□□□□ -2.14
PMS1-215ENST00000447232 TPT1P13693 172 aaKnown RBP1.67□□□□□ -2.14
PMS1-215ENST00000447232 LGALS3P17931 250 aaKnown RBP1.67□□□□□ -2.14
PMS1-215ENST00000447232 RPL12P30050 165 aaKnown RBP1.67□□□□□ -2.14
PMS1-215ENST00000447232 GNG5P63218 68 aa1.67□□□□□ -2.14
PMS1-215ENST00000447232 UBE2L3P68036 154 aaKnown RBP1.67□□□□□ -2.14
PMS1-215ENST00000447232 SPANXN2Q5MJ10 180 aa1.67□□□□□ -2.14
PMS1-215ENST00000447232 UQCC1Q9NVA1 299 aa1.67□□□□□ -2.14
PMS1-215ENST00000447232 EXTL2Q9UBQ6 330 aa1.67□□□□□ -2.14
PMS1-215ENST00000447232 SERTM2A0A1B0GWG4 89 aa1.67□□□□□ -2.14
PMS1-215ENST00000447232 M0QY20 66 aa1.67□□□□□ -2.14
PMS1-215ENST00000447232 OR7C2O60412 319 aa1.67□□□□□ -2.14
PMS1-215ENST00000447232 ATP5HO75947 161 aa1.67□□□□□ -2.14
PMS1-215ENST00000447232 TMBIM6P55061 237 aa1.67□□□□□ -2.14
PMS1-215ENST00000447232 RPS29P62273 56 aaKnown RBP1.67□□□□□ -2.14
PMS1-215ENST00000447232 SSBP1Q04837 148 aaKnown RBP1.67□□□□□ -2.14
PMS1-215ENST00000447232 GAGE2EQ4V326 116 aa1.67□□□□□ -2.14
PMS1-215ENST00000447232 C9orf129Q5T035 196 aaKnown RBP1.67□□□□□ -2.14
PMS1-215ENST00000447232 GAGE2DQ9UEU5 116 aa1.67□□□□□ -2.14
PMS1-215ENST00000447232 C7orf66A4D0T2 115 aa1.66□□□□□ -2.14
PMS1-215ENST00000447232 GRIFINA4D1Z8 144 aa1.66□□□□□ -2.14
PMS1-215ENST00000447232 FABP5P3A8MUU1 101 aa1.66□□□□□ -2.14
PMS1-215ENST00000447232 G3V3Q6 166 aa1.66□□□□□ -2.14
PMS1-215ENST00000447232 TGFBR1P36897 503 aa1.66□□□□□ -2.14
PMS1-215ENST00000447232 CTRLP40313 264 aa1.66□□□□□ -2.14
PMS1-215ENST00000447232 TMEM128Q5BJH2 165 aa1.66□□□□□ -2.14
PMS1-215ENST00000447232 FAM74A1Q5RGS3 127 aa1.66□□□□□ -2.14
PMS1-215ENST00000447232 SVIPQ8NHG7 77 aa1.66□□□□□ -2.14
PMS1-215ENST00000447232 SCGB3A2Q96PL1 93 aa1.66□□□□□ -2.14
PMS1-215ENST00000447232 NPCDR1Q9BY65 106 aa1.66□□□□□ -2.14
PMS1-215ENST00000447232 UBE2L5PA0A1B0GUS4 154 aa1.66□□□□□ -2.14
PMS1-215ENST00000447232 TCRAP04437 139 aa1.66□□□□□ -2.14
PMS1-215ENST00000447232 AKAIN1P0CW23 69 aa1.66□□□□□ -2.14
PMS1-215ENST00000447232 FLI1Q01543 452 aaPredicted RBP1.66□□□□□ -2.14
PMS1-215ENST00000447232 BAXQ07812 192 aa1.66□□□□□ -2.14
PMS1-215ENST00000447232 IAH1Q2TAA2 248 aaPredicted RBP1.66□□□□□ -2.14
PMS1-215ENST00000447232 C22orf24Q9Y442 160 aa1.66□□□□□ -2.14
PMS1-215ENST00000447232 F8WDY8 70 aa1.65□□□□□ -2.14
PMS1-215ENST00000447232 H3BMQ9 156 aa1.65□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms