RNA–Protein interactions for RNA: ENST00000443528.5

ACTB-206, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 569 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-206ENST00000443528 A0A1B0GW15 77 aa10.43□□□□□ -0.74
ACTB-206ENST00000443528 SMKR1H3BMG3 65 aa10.43□□□□□ -0.74
ACTB-206ENST00000443528 AMTP48728 403 aa10.43□□□□□ -0.74
ACTB-206ENST00000443528 FAM104BQ5XKR9 115 aa10.43□□□□□ -0.74
ACTB-206ENST00000443528 MRPL54Q6P161 138 aaKnown RBP10.43□□□□□ -0.74
ACTB-206ENST00000443528 PGPEP1Q9NXJ5 209 aa10.43□□□□□ -0.74
ACTB-206ENST00000443528 LRP1BQ9NZR2 4599 aa10.43□□□□□ -0.74
ACTB-206ENST00000443528 DNAH5Q8TE73 4624 aa10.42□□□□□ -0.74
ACTB-206ENST00000443528 NCR2O95944 276 aa10.42□□□□□ -0.74
ACTB-206ENST00000443528 MT-ND4LP03901 98 aa10.42□□□□□ -0.74
ACTB-206ENST00000443528 Q0VG73 95 aa10.42□□□□□ -0.74
ACTB-206ENST00000443528 WFDC2Q14508 124 aa10.42□□□□□ -0.74
ACTB-206ENST00000443528 MRPL51Q4U2R6 128 aaKnown RBP10.42□□□□□ -0.74
ACTB-206ENST00000443528 COMMD7Q86VX2 200 aa10.42□□□□□ -0.74
ACTB-206ENST00000443528 C20orf203Q8NBC4 194 aa10.42□□□□□ -0.74
ACTB-206ENST00000443528 ANAPC16Q96DE5 110 aa10.42□□□□□ -0.74
ACTB-206ENST00000443528 TMEM70Q9BUB7 260 aa10.42□□□□□ -0.74
ACTB-206ENST00000443528 ST20Q9HBF5 79 aa10.42□□□□□ -0.74
ACTB-206ENST00000443528 PRR34Q9NV39 138 aa10.42□□□□□ -0.74
ACTB-206ENST00000443528 COX11Q9Y6N1 276 aa10.42□□□□□ -0.74
ACTB-206ENST00000443528 IGLV4-60A0A075B6I1 120 aa10.41□□□□□ -0.74
ACTB-206ENST00000443528 IGKV2D-24A0A075B6R9 120 aa10.41□□□□□ -0.74
ACTB-206ENST00000443528 A0A1B0GUV1 79 aa10.41□□□□□ -0.74
ACTB-206ENST00000443528 POLR2KP53803 58 aaKnown RBP10.41□□□□□ -0.74
ACTB-206ENST00000443528 HBBP68871 147 aa10.41□□□□□ -0.74
ACTB-206ENST00000443528 NRACQ8N912 160 aa10.41□□□□□ -0.74
ACTB-206ENST00000443528 RMI2Q96E14 147 aa10.41□□□□□ -0.74
ACTB-206ENST00000443528 LINC00862A6NCI5 91 aa10.4□□□□□ -0.74
ACTB-206ENST00000443528 F8W036 122 aa10.4□□□□□ -0.74
ACTB-206ENST00000443528 I3L3M4 83 aa10.4□□□□□ -0.74
ACTB-206ENST00000443528 PMCHP20382 165 aa10.4□□□□□ -0.74
ACTB-206ENST00000443528 CDPF1Q6NVV7 123 aa10.4□□□□□ -0.74
ACTB-206ENST00000443528 LINC00269Q8N2A0 174 aa10.4□□□□□ -0.74
ACTB-206ENST00000443528 Q8N814 137 aa10.4□□□□□ -0.74
ACTB-206ENST00000443528 UBE2L6O14933 153 aa10.39□□□□□ -0.75
ACTB-206ENST00000443528 TSHBP01222 138 aa10.39□□□□□ -0.75
ACTB-206ENST00000443528 CRPP02741 224 aa10.39□□□□□ -0.75
ACTB-206ENST00000443528 CLPSL2Q6UWE3 100 aa10.39□□□□□ -0.75
ACTB-206ENST00000443528 ATP5L2Q7Z4Y8 100 aa10.39□□□□□ -0.75
ACTB-206ENST00000443528 BAALCQ8WXS3 180 aa10.39□□□□□ -0.75
ACTB-206ENST00000443528 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.38□□□□□ -0.75
ACTB-206ENST00000443528 TRBV27A0A0K0K1C4 114 aa10.38□□□□□ -0.75
ACTB-206ENST00000443528 IGKV2-29A2NJV5 120 aaPredicted RBP10.38□□□□□ -0.75
ACTB-206ENST00000443528 LECT2O14960 151 aa10.38□□□□□ -0.75
ACTB-206ENST00000443528 APCSP02743 223 aa10.38□□□□□ -0.75
ACTB-206ENST00000443528 S100A8P05109 93 aa10.38□□□□□ -0.75
ACTB-206ENST00000443528 MIAQ16674 131 aa10.38□□□□□ -0.75
ACTB-206ENST00000443528 C1orf43Q9BWL3 253 aa10.38□□□□□ -0.75
ACTB-206ENST00000443528 SEC11CQ9BY50 192 aa10.38□□□□□ -0.75
ACTB-206ENST00000443528 TMEM242Q9NWH2 141 aa10.38□□□□□ -0.75
ACTB-206ENST00000443528 PPP1R17O96001 155 aa10.37□□□□□ -0.75
ACTB-206ENST00000443528 ESDP10768 282 aa10.37□□□□□ -0.75
ACTB-206ENST00000443528 REG3AQ06141 175 aa10.37□□□□□ -0.75
ACTB-206ENST00000443528 KRTAP26-1Q6PEX3 210 aa10.37□□□□□ -0.75
ACTB-206ENST00000443528 RYR1P21817 5038 aa10.37□□□□□ -0.75
ACTB-206ENST00000443528 CKS2P33552 79 aa10.36□□□□□ -0.75
ACTB-206ENST00000443528 SUMO2P61956 95 aaKnown RBP10.36□□□□□ -0.75
ACTB-206ENST00000443528 TRBV24-1A0A075B6N3 115 aa10.35□□□□□ -0.75
ACTB-206ENST00000443528 H7C423 109 aa10.35□□□□□ -0.75
ACTB-206ENST00000443528 VCYO14598 125 aa10.35□□□□□ -0.75
ACTB-206ENST00000443528 CDK2AP2O75956 126 aa10.35□□□□□ -0.75
ACTB-206ENST00000443528 C10orf91Q5T1B1 145 aa10.35□□□□□ -0.75
ACTB-206ENST00000443528 NTN5Q8WTR8 489 aaPredicted RBP10.35□□□□□ -0.75
ACTB-206ENST00000443528 IGLV5-52A0A0A0MRZ9 124 aa10.34□□□□□ -0.75
ACTB-206ENST00000443528 D6R8Y8 96 aa10.34□□□□□ -0.75
ACTB-206ENST00000443528 TNFRSF6BO95407 300 aa10.34□□□□□ -0.75
ACTB-206ENST00000443528 FGF6P10767 208 aa10.34□□□□□ -0.75
ACTB-206ENST00000443528 KRTAP10-1P60331 282 aa10.34□□□□□ -0.75
ACTB-206ENST00000443528 C20orf78Q9BR46 151 aa10.34□□□□□ -0.75
ACTB-206ENST00000443528 APOBP04114 4563 aaKnown RBP10.34□□□□□ -0.75
ACTB-206ENST00000443528 IGLV10-54A0A075B6I4 117 aa10.33□□□□□ -0.76
ACTB-206ENST00000443528 NPYP01303 97 aa10.33□□□□□ -0.76
ACTB-206ENST00000443528 AMMECR1LQ6DCA0 310 aa10.33□□□□□ -0.76
ACTB-206ENST00000443528 BTF3L4Q96K17 158 aa10.33□□□□□ -0.76
ACTB-206ENST00000443528 IMMP2LQ96T52 175 aa10.33□□□□□ -0.76
ACTB-206ENST00000443528 CTDSP1Q9GZU7 261 aa10.33□□□□□ -0.76
ACTB-206ENST00000443528 HLA-DQA1P01909 254 aa10.32□□□□□ -0.76
ACTB-206ENST00000443528 PPBPP02775 128 aa10.32□□□□□ -0.76
ACTB-206ENST00000443528 GCSHP23434 173 aa10.32□□□□□ -0.76
ACTB-206ENST00000443528 RPL32P62910 135 aaKnown RBP10.32□□□□□ -0.76
ACTB-206ENST00000443528 RNASEKQ6P5S7 137 aaKnown RBP10.32□□□□□ -0.76
ACTB-206ENST00000443528 CARHSP1Q9Y2V2 147 aaKnown RBP10.32□□□□□ -0.76
ACTB-206ENST00000443528 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.31□□□□□ -0.76
ACTB-206ENST00000443528 TRAV8-4A0A0B4J246 113 aa10.31□□□□□ -0.76
ACTB-206ENST00000443528 C7orf77A4D0Y5 90 aa10.31□□□□□ -0.76
ACTB-206ENST00000443528 PHOX2AO14813 284 aa10.31□□□□□ -0.76
ACTB-206ENST00000443528 ZNF25P17030 456 aaPredicted RBP10.31□□□□□ -0.76
ACTB-206ENST00000443528 FCER1GP30273 86 aa10.31□□□□□ -0.76
ACTB-206ENST00000443528 KIR2DL4Q99706 377 aa10.31□□□□□ -0.76
ACTB-206ENST00000443528 HSPG2P98160 4391 aa10.31□□□□□ -0.76
ACTB-206ENST00000443528 TMEM136Q6ZRR5 245 aa10.3□□□□□ -0.76
ACTB-206ENST00000443528 MRPL52Q86TS9 123 aaKnown RBP10.3□□□□□ -0.76
ACTB-206ENST00000443528 ORMDL3Q8N138 153 aa10.3□□□□□ -0.76
ACTB-206ENST00000443528 SMIM2Q9BVW6 85 aa10.3□□□□□ -0.76
ACTB-206ENST00000443528 KRTAP17-1Q9BYP8 105 aa10.3□□□□□ -0.76
ACTB-206ENST00000443528 IGKV3OR2-268A0A0C4DH90 116 aa10.29□□□□□ -0.76
ACTB-206ENST00000443528 USP17L23D6RBM5 183 aa10.29□□□□□ -0.76
ACTB-206ENST00000443528 PRELID3AQ96N28 172 aa10.29□□□□□ -0.76
ACTB-206ENST00000443528 CLRN3Q8NCR9 226 aa10.28□□□□□ -0.76
ACTB-206ENST00000443528 TMEM101Q96IK0 257 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms