RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 EPM2AB3EWF7 344 aa13.85□□□□□ -0.19
CDKN3-204ENST00000442975 FRZBQ92765 325 aa13.85□□□□□ -0.19
CDKN3-204ENST00000442975 C9JQL5 133 aa13.84□□□□□ -0.19
CDKN3-204ENST00000442975 ADIRFQ15847 76 aa13.84□□□□□ -0.19
CDKN3-204ENST00000442975 TMEM241Q24JQ0 296 aa13.84□□□□□ -0.19
CDKN3-204ENST00000442975 LINC01620Q4KN68 170 aa13.84□□□□□ -0.19
CDKN3-204ENST00000442975 GFRA4Q9GZZ7 299 aa13.84□□□□□ -0.19
CDKN3-204ENST00000442975 A0A1B0GUT8 65 aa13.83□□□□□ -0.2
CDKN3-204ENST00000442975 SRSF3P84103 164 aaKnown RBP13.83□□□□□ -0.2
CDKN3-204ENST00000442975 FAM74A3Q4VXF1 159 aa13.83□□□□□ -0.2
CDKN3-204ENST00000442975 ISOC2Q96AB3 205 aa13.83□□□□□ -0.2
CDKN3-204ENST00000442975 PRR34Q9NV39 138 aa13.83□□□□□ -0.2
CDKN3-204ENST00000442975 SMR3BP02814 79 aaPredicted RBP13.82□□□□□ -0.2
CDKN3-204ENST00000442975 RPL23P62829 140 aaKnown RBP13.82□□□□□ -0.2
CDKN3-204ENST00000442975 REG3AQ06141 175 aa13.82□□□□□ -0.2
CDKN3-204ENST00000442975 PEA15Q15121 130 aa13.82□□□□□ -0.2
CDKN3-204ENST00000442975 V9GYV3 84 aa13.82□□□□□ -0.2
CDKN3-204ENST00000442975 IGLV10-54A0A075B6I4 117 aa13.81□□□□□ -0.2
CDKN3-204ENST00000442975 C14orf177Q52M58 125 aa13.81□□□□□ -0.2
CDKN3-204ENST00000442975 Q5VSD8 79 aa13.81□□□□□ -0.2
CDKN3-204ENST00000442975 C20orf203Q8NBC4 194 aa13.81□□□□□ -0.2
CDKN3-204ENST00000442975 FAM30AQ9NZY2 134 aa13.81□□□□□ -0.2
CDKN3-204ENST00000442975 NAT8Q9UHE5 227 aa13.81□□□□□ -0.2
CDKN3-204ENST00000442975 IGLV4-60A0A075B6I1 120 aa13.8□□□□□ -0.2
CDKN3-204ENST00000442975 FAM231BA6NCW3 169 aa13.8□□□□□ -0.2
CDKN3-204ENST00000442975 USP17L23D6RBM5 183 aa13.8□□□□□ -0.2
CDKN3-204ENST00000442975 SDHAF1A6NFY7 115 aa13.79□□□□□ -0.2
CDKN3-204ENST00000442975 APCSP02743 223 aa13.79□□□□□ -0.2
CDKN3-204ENST00000442975 TMEM191AQ9H0A3 160 aa13.78□□□□□ -0.2
CDKN3-204ENST00000442975 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.77□□□□□ -0.21
CDKN3-204ENST00000442975 A0A1B0GUV1 79 aa13.77□□□□□ -0.21
CDKN3-204ENST00000442975 IGKV2-29A2NJV5 120 aaPredicted RBP13.77□□□□□ -0.21
CDKN3-204ENST00000442975 GAS8-AS1O95177 125 aa13.77□□□□□ -0.21
CDKN3-204ENST00000442975 RIGQ13278 110 aa13.77□□□□□ -0.21
CDKN3-204ENST00000442975 AMMECR1LQ6DCA0 310 aa13.77□□□□□ -0.21
CDKN3-204ENST00000442975 AMN1Q8IY45 258 aa13.77□□□□□ -0.21
CDKN3-204ENST00000442975 NUP35Q8NFH5 326 aa13.77□□□□□ -0.21
CDKN3-204ENST00000442975 NCR2O95944 276 aa13.76□□□□□ -0.21
CDKN3-204ENST00000442975 NAT8BQ9UHF3 227 aa13.76□□□□□ -0.21
CDKN3-204ENST00000442975 IGKV3OR2-268A0A0C4DH90 116 aa13.75□□□□□ -0.21
CDKN3-204ENST00000442975 PMCHP20382 165 aa13.75□□□□□ -0.21
CDKN3-204ENST00000442975 KRTAP26-1Q6PEX3 210 aa13.75□□□□□ -0.21
CDKN3-204ENST00000442975 RNF185Q96GF1 192 aa13.75□□□□□ -0.21
CDKN3-204ENST00000442975 SMDT1Q9H4I9 107 aa13.75□□□□□ -0.21
CDKN3-204ENST00000442975 ST20Q9HBF5 79 aa13.75□□□□□ -0.21
CDKN3-204ENST00000442975 TRBV6-5A0A0K0K1A5 114 aa13.74□□□□□ -0.21
CDKN3-204ENST00000442975 I3L3M4 83 aa13.74□□□□□ -0.21
CDKN3-204ENST00000442975 RNASEKQ6P5S7 137 aaKnown RBP13.74□□□□□ -0.21
CDKN3-204ENST00000442975 Q6ZSA8 131 aa13.74□□□□□ -0.21
CDKN3-204ENST00000442975 MRAP2Q96G30 205 aa13.74□□□□□ -0.21
CDKN3-204ENST00000442975 TMEM242Q9NWH2 141 aa13.74□□□□□ -0.21
CDKN3-204ENST00000442975 TRAV8-4A0A0B4J246 113 aa13.73□□□□□ -0.21
CDKN3-204ENST00000442975 SMKR1H3BMG3 65 aa13.73□□□□□ -0.21
CDKN3-204ENST00000442975 FAM229AH3BQW9 127 aa13.73□□□□□ -0.21
CDKN3-204ENST00000442975 RAB4AP20338 218 aa13.73□□□□□ -0.21
CDKN3-204ENST00000442975 RPS10P46783 165 aaKnown RBP13.73□□□□□ -0.21
CDKN3-204ENST00000442975 PRSS1P07477 247 aa13.72□□□□□ -0.21
CDKN3-204ENST00000442975 TSHBP01222 138 aa13.71□□□□□ -0.21
CDKN3-204ENST00000442975 FGF6P10767 208 aa13.71□□□□□ -0.21
CDKN3-204ENST00000442975 VPS13BQ7Z7G8 4022 aa13.71□□□□□ -0.21
CDKN3-204ENST00000442975 SMIM27A0A1W2PRY6 76 aa13.7□□□□□ -0.22
CDKN3-204ENST00000442975 CAMPP49913 170 aa13.7□□□□□ -0.22
CDKN3-204ENST00000442975 INAFM2P0DMQ5 153 aa13.69□□□□□ -0.22
CDKN3-204ENST00000442975 RAB14P61106 215 aa13.69□□□□□ -0.22
CDKN3-204ENST00000442975 SCXQ7RTU7 201 aa13.69□□□□□ -0.22
CDKN3-204ENST00000442975 hDV102S1A0JD36 115 aa13.68□□□□□ -0.22
CDKN3-204ENST00000442975 H7C423 109 aa13.68□□□□□ -0.22
CDKN3-204ENST00000442975 BTF3L4Q96K17 158 aa13.68□□□□□ -0.22
CDKN3-204ENST00000442975 GAGE12HA6NDE8 117 aa13.67□□□□□ -0.22
CDKN3-204ENST00000442975 MRPL54Q6P161 138 aaKnown RBP13.67□□□□□ -0.22
CDKN3-204ENST00000442975 TMEM101Q96IK0 257 aa13.67□□□□□ -0.22
CDKN3-204ENST00000442975 FCER1GP30273 86 aa13.66□□□□□ -0.22
CDKN3-204ENST00000442975 LINC00528Q8N1L1 170 aa13.66□□□□□ -0.22
CDKN3-204ENST00000442975 OR5A1Q8NGJ0 315 aa13.66□□□□□ -0.22
CDKN3-204ENST00000442975 TRBV27A0A0K0K1C4 114 aa13.65□□□□□ -0.22
CDKN3-204ENST00000442975 A0A1B0GW15 77 aa13.65□□□□□ -0.22
CDKN3-204ENST00000442975 PPP1R17O96001 155 aa13.65□□□□□ -0.22
CDKN3-204ENST00000442975 ZNF25P17030 456 aaPredicted RBP13.65□□□□□ -0.22
CDKN3-204ENST00000442975 POLR2KP53803 58 aaKnown RBP13.65□□□□□ -0.22
CDKN3-204ENST00000442975 FAM104BQ5XKR9 115 aa13.65□□□□□ -0.22
CDKN3-204ENST00000442975 NRACQ8N912 160 aa13.65□□□□□ -0.22
CDKN3-204ENST00000442975 CLRN3Q8NCR9 226 aa13.65□□□□□ -0.22
CDKN3-204ENST00000442975 CHAC1Q9BUX1 264 aa13.65□□□□□ -0.22
CDKN3-204ENST00000442975 C7orf77A4D0Y5 90 aa13.64□□□□□ -0.23
CDKN3-204ENST00000442975 ESDP10768 282 aa13.64□□□□□ -0.23
CDKN3-204ENST00000442975 SUMO2P61956 95 aaKnown RBP13.64□□□□□ -0.23
CDKN3-204ENST00000442975 MRPL51Q4U2R6 128 aaKnown RBP13.64□□□□□ -0.23
CDKN3-204ENST00000442975 DGAT2L7PQ6IED9 249 aa13.64□□□□□ -0.23
CDKN3-204ENST00000442975 CHCHD10Q8WYQ3 142 aaPredicted RBP13.64□□□□□ -0.23
CDKN3-204ENST00000442975 VCYO14598 125 aa13.63□□□□□ -0.23
CDKN3-204ENST00000442975 HBBP68871 147 aa13.63□□□□□ -0.23
CDKN3-204ENST00000442975 AP5S1Q9NUS5 200 aa13.63□□□□□ -0.23
CDKN3-204ENST00000442975 S100A8P05109 93 aa13.62□□□□□ -0.23
CDKN3-204ENST00000442975 CKS2P33552 79 aa13.62□□□□□ -0.23
CDKN3-204ENST00000442975 CIRBP-AS1Q8TBR5 109 aa13.62□□□□□ -0.23
CDKN3-204ENST00000442975 C9orf163Q8N9P6 203 aa13.61□□□□□ -0.23
CDKN3-204ENST00000442975 KIR2DL4Q99706 377 aa13.61□□□□□ -0.23
CDKN3-204ENST00000442975 SRRM2Q9UQ35 2752 aaKnown RBP13.61□□□□□ -0.23
CDKN3-204ENST00000442975 MYCBP2O75592 4640 aa13.6□□□□□ -0.23
CDKN3-204ENST00000442975 F8W036 122 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms