RNA–Protein interactions for RNA: ENST00000442265.2

IRF3-204, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-204ENST00000442265 FAM231DQ6ZW35 169 aa10.73□□□□□ -0.69
IRF3-204ENST00000442265 GTSF1Q8WW33 167 aa10.73□□□□□ -0.69
IRF3-204ENST00000442265 KRTAP10-4P60372 401 aaPredicted RBP10.72□□□□□ -0.69
IRF3-204ENST00000442265 ALKAL2Q6UX46 152 aa10.72□□□□□ -0.69
IRF3-204ENST00000442265 C9orf163Q8N9P6 203 aa10.72□□□□□ -0.69
IRF3-204ENST00000442265 GATD1Q8NB37 220 aa10.72□□□□□ -0.69
IRF3-204ENST00000442265 CLRN3Q8NCR9 226 aa10.72□□□□□ -0.69
IRF3-204ENST00000442265 IGLV4-60A0A075B6I1 120 aa10.71□□□□□ -0.69
IRF3-204ENST00000442265 FOXA3P55318 350 aaPredicted RBP10.71□□□□□ -0.69
IRF3-204ENST00000442265 CLPSL2Q6UWE3 100 aa10.71□□□□□ -0.69
IRF3-204ENST00000442265 DEFB104AQ8WTQ1 72 aa10.71□□□□□ -0.69
IRF3-204ENST00000442265 COTL1Q14019 142 aa10.7□□□□□ -0.7
IRF3-204ENST00000442265 CT83Q5H943 113 aa10.7□□□□□ -0.7
IRF3-204ENST00000442265 LRP1Q07954 4544 aaKnown RBP10.7□□□□□ -0.7
IRF3-204ENST00000442265 A8MWL6 223 aa10.69□□□□□ -0.7
IRF3-204ENST00000442265 CNBPP62633 177 aaKnown RBP10.69□□□□□ -0.7
IRF3-204ENST00000442265 TEX261Q6UWH6 196 aa10.69□□□□□ -0.7
IRF3-204ENST00000442265 GFRA4Q9GZZ7 299 aa10.69□□□□□ -0.7
IRF3-204ENST00000442265 KRTAP29-1A8MX34 341 aaPredicted RBP10.68□□□□□ -0.7
IRF3-204ENST00000442265 GATCO43716 136 aaKnown RBP10.68□□□□□ -0.7
IRF3-204ENST00000442265 NCR2O95944 276 aa10.68□□□□□ -0.7
IRF3-204ENST00000442265 AMTP48728 403 aa10.68□□□□□ -0.7
IRF3-204ENST00000442265 SMIM15Q7Z3B0 74 aa10.68□□□□□ -0.7
IRF3-204ENST00000442265 IGLV10-54A0A075B6I4 117 aa10.67□□□□□ -0.7
IRF3-204ENST00000442265 TRAV26-2A0A0B4J265 109 aa10.67□□□□□ -0.7
IRF3-204ENST00000442265 UBE2L6O14933 153 aa10.67□□□□□ -0.7
IRF3-204ENST00000442265 SDIM1Q6ZPB5 146 aa10.67□□□□□ -0.7
IRF3-204ENST00000442265 H7C423 109 aa10.66□□□□□ -0.7
IRF3-204ENST00000442265 FAT3Q8TDW7 4589 aa10.66□□□□□ -0.7
IRF3-204ENST00000442265 PKHD1L1Q86WI1 4243 aa10.66□□□□□ -0.7
IRF3-204ENST00000442265 hCG_2014768A0A024R1R8 64 aa10.65□□□□□ -0.7
IRF3-204ENST00000442265 TRBV6-5A0A0K0K1A5 114 aa10.65□□□□□ -0.7
IRF3-204ENST00000442265 FAM231BA6NCW3 169 aa10.65□□□□□ -0.7
IRF3-204ENST00000442265 RPL39LQ96EH5 51 aaKnown RBP10.65□□□□□ -0.7
IRF3-204ENST00000442265 FAM210AQ96ND0 272 aa10.65□□□□□ -0.7
IRF3-204ENST00000442265 CIRBPQ14011 172 aaKnown RBP10.64□□□□□ -0.71
IRF3-204ENST00000442265 LINC01551Q86U37 167 aa10.64□□□□□ -0.71
IRF3-204ENST00000442265 SMIM7Q9BQ49 75 aa10.64□□□□□ -0.71
IRF3-204ENST00000442265 SDHAF1A6NFY7 115 aa10.63□□□□□ -0.71
IRF3-204ENST00000442265 TSKUQ8WUA8 353 aa10.63□□□□□ -0.71
IRF3-204ENST00000442265 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.63□□□□□ -0.71
IRF3-204ENST00000442265 hDV102S1A0JD36 115 aa10.62□□□□□ -0.71
IRF3-204ENST00000442265 J3QL48 77 aa10.62□□□□□ -0.71
IRF3-204ENST00000442265 SLPIP03973 132 aa10.62□□□□□ -0.71
IRF3-204ENST00000442265 EIF5A2Q9GZV4 153 aaKnown RBP10.62□□□□□ -0.71
IRF3-204ENST00000442265 TMEM191AQ9H0A3 160 aa10.62□□□□□ -0.71
IRF3-204ENST00000442265 OSTCQ9NRP0 149 aa10.62□□□□□ -0.71
IRF3-204ENST00000442265 A0A1B0GUT8 65 aa10.61□□□□□ -0.71
IRF3-204ENST00000442265 PANO1I0J062 215 aa10.61□□□□□ -0.71
IRF3-204ENST00000442265 APCSP02743 223 aa10.61□□□□□ -0.71
IRF3-204ENST00000442265 SRP19P09132 144 aaKnown RBP10.61□□□□□ -0.71
IRF3-204ENST00000442265 CEBPGP53567 150 aa10.61□□□□□ -0.71
IRF3-204ENST00000442265 HIGD1CA8MV81 97 aa10.6□□□□□ -0.71
IRF3-204ENST00000442265 I3L3M4 83 aa10.6□□□□□ -0.71
IRF3-204ENST00000442265 ZNF25P17030 456 aaPredicted RBP10.6□□□□□ -0.71
IRF3-204ENST00000442265 C15orf56Q8N910 161 aa10.6□□□□□ -0.71
IRF3-204ENST00000442265 BORCS7Q96B45 105 aa10.6□□□□□ -0.71
IRF3-204ENST00000442265 AP5S1Q9NUS5 200 aa10.6□□□□□ -0.71
IRF3-204ENST00000442265 IGHV3-64A0A075B6Q5 118 aa10.59□□□□□ -0.71
IRF3-204ENST00000442265 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.59□□□□□ -0.71
IRF3-204ENST00000442265 ZNF727A8MUV8 499 aa10.59□□□□□ -0.71
IRF3-204ENST00000442265 OXTP01178 125 aa10.59□□□□□ -0.71
IRF3-204ENST00000442265 FGF6P10767 208 aa10.59□□□□□ -0.71
IRF3-204ENST00000442265 ESDP10768 282 aa10.59□□□□□ -0.71
IRF3-204ENST00000442265 AMMECR1LQ6DCA0 310 aa10.59□□□□□ -0.71
IRF3-204ENST00000442265 CFAP161Q6P656 301 aa10.59□□□□□ -0.71
IRF3-204ENST00000442265 RNF185Q96GF1 192 aa10.59□□□□□ -0.71
IRF3-204ENST00000442265 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.58□□□□□ -0.72
IRF3-204ENST00000442265 IGKV2-29A2NJV5 120 aaPredicted RBP10.58□□□□□ -0.72
IRF3-204ENST00000442265 GAGE12HA6NDE8 117 aa10.58□□□□□ -0.72
IRF3-204ENST00000442265 GAS8-AS1O95177 125 aa10.58□□□□□ -0.72
IRF3-204ENST00000442265 POLR2KP53803 58 aaKnown RBP10.58□□□□□ -0.72
IRF3-204ENST00000442265 RPL37AP61513 92 aaKnown RBP10.58□□□□□ -0.72
IRF3-204ENST00000442265 TRBV27A0A0K0K1C4 114 aa10.57□□□□□ -0.72
IRF3-204ENST00000442265 TSHBP01222 138 aa10.57□□□□□ -0.72
IRF3-204ENST00000442265 RAB4AP20338 218 aa10.57□□□□□ -0.72
IRF3-204ENST00000442265 PMCHP20382 165 aa10.57□□□□□ -0.72
IRF3-204ENST00000442265 FAM74A3Q4VXF1 159 aa10.57□□□□□ -0.72
IRF3-204ENST00000442265 CHCHD10Q8WYQ3 142 aaPredicted RBP10.57□□□□□ -0.72
IRF3-204ENST00000442265 MRAP2Q96G30 205 aa10.57□□□□□ -0.72
IRF3-204ENST00000442265 ST20Q9HBF5 79 aa10.57□□□□□ -0.72
IRF3-204ENST00000442265 V9GYV3 84 aa10.57□□□□□ -0.72
IRF3-204ENST00000442265 HMCN2Q8NDA2 5059 aa10.57□□□□□ -0.72
IRF3-204ENST00000442265 RNASEKQ6P5S7 137 aaKnown RBP10.56□□□□□ -0.72
IRF3-204ENST00000442265 MRPL52Q86TS9 123 aaKnown RBP10.56□□□□□ -0.72
IRF3-204ENST00000442265 OR5A1Q8NGJ0 315 aa10.56□□□□□ -0.72
IRF3-204ENST00000442265 NUP35Q8NFH5 326 aa10.55□□□□□ -0.72
IRF3-204ENST00000442265 ISOC2Q96AB3 205 aa10.55□□□□□ -0.72
IRF3-204ENST00000442265 GVQW2A0A096LPI5 108 aaPredicted RBP10.54□□□□□ -0.72
IRF3-204ENST00000442265 IGKV3OR2-268A0A0C4DH90 116 aa10.54□□□□□ -0.72
IRF3-204ENST00000442265 RPS10P46783 165 aaKnown RBP10.54□□□□□ -0.72
IRF3-204ENST00000442265 FOXI1Q12951 378 aa10.54□□□□□ -0.72
IRF3-204ENST00000442265 TMEM241Q24JQ0 296 aa10.54□□□□□ -0.72
IRF3-204ENST00000442265 SPACA4Q8TDM5 124 aa10.54□□□□□ -0.72
IRF3-204ENST00000442265 BTF3L4Q96K17 158 aa10.54□□□□□ -0.72
IRF3-204ENST00000442265 A0A1B0GVG6 124 aa10.53□□□□□ -0.72
IRF3-204ENST00000442265 RPL23P62829 140 aaKnown RBP10.53□□□□□ -0.72
IRF3-204ENST00000442265 RIGQ13278 110 aa10.53□□□□□ -0.72
IRF3-204ENST00000442265 AMN1Q8IY45 258 aa10.53□□□□□ -0.72
IRF3-204ENST00000442265 TMEM101Q96IK0 257 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms