RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 FAM229AH3BQW9 127 aa12.31□□□□□ -0.44
HMGB3P22-201ENST00000442010 CEBPGP53567 150 aa12.31□□□□□ -0.44
HMGB3P22-201ENST00000442010 C14orf177Q52M58 125 aa12.31□□□□□ -0.44
HMGB3P22-201ENST00000442010 LINC01551Q86U37 167 aa12.31□□□□□ -0.44
HMGB3P22-201ENST00000442010 DEFB104AQ8WTQ1 72 aa12.31□□□□□ -0.44
HMGB3P22-201ENST00000442010 EIF5A2Q9GZV4 153 aaKnown RBP12.31□□□□□ -0.44
HMGB3P22-201ENST00000442010 HLA-DQA1P01909 254 aa12.3□□□□□ -0.44
HMGB3P22-201ENST00000442010 SRP19P09132 144 aaKnown RBP12.3□□□□□ -0.44
HMGB3P22-201ENST00000442010 REG3AQ06141 175 aa12.3□□□□□ -0.44
HMGB3P22-201ENST00000442010 SMIM7Q9BQ49 75 aa12.3□□□□□ -0.44
HMGB3P22-201ENST00000442010 GFRA4Q9GZZ7 299 aa12.3□□□□□ -0.44
HMGB3P22-201ENST00000442010 COTL1Q14019 142 aa12.29□□□□□ -0.44
HMGB3P22-201ENST00000442010 RPL39LQ96EH5 51 aaKnown RBP12.29□□□□□ -0.44
HMGB3P22-201ENST00000442010 PRSS1P07477 247 aa12.28□□□□□ -0.44
HMGB3P22-201ENST00000442010 SCXQ7RTU7 201 aa12.28□□□□□ -0.44
HMGB3P22-201ENST00000442010 ZNF727A8MUV8 499 aa12.27□□□□□ -0.45
HMGB3P22-201ENST00000442010 AMTP48728 403 aa12.27□□□□□ -0.45
HMGB3P22-201ENST00000442010 TSKUQ8WUA8 353 aa12.27□□□□□ -0.45
HMGB3P22-201ENST00000442010 OSTCQ9NRP0 149 aa12.27□□□□□ -0.45
HMGB3P22-201ENST00000442010 HERC1Q15751 4861 aa12.26□□□□□ -0.45
HMGB3P22-201ENST00000442010 TEX261Q6UWH6 196 aa12.26□□□□□ -0.45
HMGB3P22-201ENST00000442010 SMIM15Q7Z3B0 74 aa12.26□□□□□ -0.45
HMGB3P22-201ENST00000442010 DMBT1Q9UGM3 2413 aaPredicted RBP12.25□□□□□ -0.45
HMGB3P22-201ENST00000442010 IGLV10-54A0A075B6I4 117 aa12.25□□□□□ -0.45
HMGB3P22-201ENST00000442010 TRAV8-4A0A0B4J246 113 aa12.25□□□□□ -0.45
HMGB3P22-201ENST00000442010 FAM231BA6NCW3 169 aa12.25□□□□□ -0.45
HMGB3P22-201ENST00000442010 HIGD1CA8MV81 97 aa12.25□□□□□ -0.45
HMGB3P22-201ENST00000442010 CHAC1Q9BUX1 264 aa12.25□□□□□ -0.45
HMGB3P22-201ENST00000442010 UBE2L6O14933 153 aa12.24□□□□□ -0.45
HMGB3P22-201ENST00000442010 GAS8-AS1O95177 125 aa12.24□□□□□ -0.45
HMGB3P22-201ENST00000442010 NCR2O95944 276 aa12.24□□□□□ -0.45
HMGB3P22-201ENST00000442010 DGAT2L7PQ6IED9 249 aa12.24□□□□□ -0.45
HMGB3P22-201ENST00000442010 LINC00528Q8N1L1 170 aa12.24□□□□□ -0.45
HMGB3P22-201ENST00000442010 TRBV6-5A0A0K0K1A5 114 aa12.23□□□□□ -0.45
HMGB3P22-201ENST00000442010 A0A1B0GUT8 65 aa12.23□□□□□ -0.45
HMGB3P22-201ENST00000442010 SDHAF1A6NFY7 115 aa12.23□□□□□ -0.45
HMGB3P22-201ENST00000442010 CIRBP-AS1Q8TBR5 109 aa12.23□□□□□ -0.45
HMGB3P22-201ENST00000442010 TMEM191AQ9H0A3 160 aa12.23□□□□□ -0.45
HMGB3P22-201ENST00000442010 V9GYV3 84 aa12.23□□□□□ -0.45
HMGB3P22-201ENST00000442010 C9JQL5 133 aa12.22□□□□□ -0.45
HMGB3P22-201ENST00000442010 C9orf163Q8N9P6 203 aa12.22□□□□□ -0.45
HMGB3P22-201ENST00000442010 ISOC2Q96AB3 205 aa12.22□□□□□ -0.45
HMGB3P22-201ENST00000442010 RNF185Q96GF1 192 aa12.22□□□□□ -0.45
HMGB3P22-201ENST00000442010 CLRN3Q8NCR9 226 aa12.21□□□□□ -0.45
HMGB3P22-201ENST00000442010 BORCS7Q96B45 105 aa12.21□□□□□ -0.45
HMGB3P22-201ENST00000442010 H7C423 109 aa12.2□□□□□ -0.46
HMGB3P22-201ENST00000442010 PLA2G1BP04054 148 aaKnown RBP12.2□□□□□ -0.46
HMGB3P22-201ENST00000442010 RPL23P62829 140 aaKnown RBP12.2□□□□□ -0.46
HMGB3P22-201ENST00000442010 TMEM241Q24JQ0 296 aa12.2□□□□□ -0.46
HMGB3P22-201ENST00000442010 FAM74A3Q4VXF1 159 aa12.2□□□□□ -0.46
HMGB3P22-201ENST00000442010 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.19□□□□□ -0.46
HMGB3P22-201ENST00000442010 IGKV2-29A2NJV5 120 aaPredicted RBP12.19□□□□□ -0.46
HMGB3P22-201ENST00000442010 I3L3M4 83 aa12.19□□□□□ -0.46
HMGB3P22-201ENST00000442010 APCSP02743 223 aa12.19□□□□□ -0.46
HMGB3P22-201ENST00000442010 RAB4AP20338 218 aa12.19□□□□□ -0.46
HMGB3P22-201ENST00000442010 KRTAP10-4P60372 401 aaPredicted RBP12.19□□□□□ -0.46
HMGB3P22-201ENST00000442010 SRSF3P84103 164 aaKnown RBP12.19□□□□□ -0.46
HMGB3P22-201ENST00000442010 NUP35Q8NFH5 326 aa12.19□□□□□ -0.46
HMGB3P22-201ENST00000442010 RPS10P46783 165 aaKnown RBP12.18□□□□□ -0.46
HMGB3P22-201ENST00000442010 POLR2KP53803 58 aaKnown RBP12.18□□□□□ -0.46
HMGB3P22-201ENST00000442010 CNBPP62633 177 aaKnown RBP12.18□□□□□ -0.46
HMGB3P22-201ENST00000442010 TSHBP01222 138 aa12.17□□□□□ -0.46
HMGB3P22-201ENST00000442010 SLPIP03973 132 aa12.17□□□□□ -0.46
HMGB3P22-201ENST00000442010 FGF6P10767 208 aa12.17□□□□□ -0.46
HMGB3P22-201ENST00000442010 ESDP10768 282 aa12.17□□□□□ -0.46
HMGB3P22-201ENST00000442010 PMCHP20382 165 aa12.17□□□□□ -0.46
HMGB3P22-201ENST00000442010 AMN1Q8IY45 258 aa12.17□□□□□ -0.46
HMGB3P22-201ENST00000442010 AMMECR1LQ6DCA0 310 aa12.16□□□□□ -0.46
HMGB3P22-201ENST00000442010 SDIM1Q6ZPB5 146 aa12.16□□□□□ -0.46
HMGB3P22-201ENST00000442010 MRAP2Q96G30 205 aa12.16□□□□□ -0.46
HMGB3P22-201ENST00000442010 ST20Q9HBF5 79 aa12.16□□□□□ -0.46
HMGB3P22-201ENST00000442010 NAT8Q9UHE5 227 aa12.16□□□□□ -0.46
HMGB3P22-201ENST00000442010 TRBV27A0A0K0K1C4 114 aa12.15□□□□□ -0.46
HMGB3P22-201ENST00000442010 hDV102S1A0JD36 115 aa12.15□□□□□ -0.46
HMGB3P22-201ENST00000442010 RIGQ13278 110 aa12.15□□□□□ -0.46
HMGB3P22-201ENST00000442010 SMDT1Q9H4I9 107 aa12.15□□□□□ -0.46
HMGB3P22-201ENST00000442010 NAT8BQ9UHF3 227 aa12.15□□□□□ -0.46
HMGB3P22-201ENST00000442010 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.15□□□□□ -0.46
HMGB3P22-201ENST00000442010 GAGE12HA6NDE8 117 aa12.14□□□□□ -0.47
HMGB3P22-201ENST00000442010 PANO1I0J062 215 aa12.14□□□□□ -0.47
HMGB3P22-201ENST00000442010 ZNF25P17030 456 aaPredicted RBP12.14□□□□□ -0.47
HMGB3P22-201ENST00000442010 PEA15Q15121 130 aa12.14□□□□□ -0.47
HMGB3P22-201ENST00000442010 ADIRFQ15847 76 aa12.14□□□□□ -0.47
HMGB3P22-201ENST00000442010 RNASEKQ6P5S7 137 aaKnown RBP12.14□□□□□ -0.47
HMGB3P22-201ENST00000442010 C15orf56Q8N910 161 aa12.14□□□□□ -0.47
HMGB3P22-201ENST00000442010 TMEM242Q9NWH2 141 aa12.14□□□□□ -0.47
HMGB3P22-201ENST00000442010 IGKV3OR2-268A0A0C4DH90 116 aa12.13□□□□□ -0.47
HMGB3P22-201ENST00000442010 SMIM27A0A1W2PRY6 76 aa12.13□□□□□ -0.47
HMGB3P22-201ENST00000442010 CHCHD10Q8WYQ3 142 aaPredicted RBP12.13□□□□□ -0.47
HMGB3P22-201ENST00000442010 SMKR1H3BMG3 65 aa12.12□□□□□ -0.47
HMGB3P22-201ENST00000442010 CIRBPQ14011 172 aaKnown RBP12.12□□□□□ -0.47
HMGB3P22-201ENST00000442010 NRACQ8N912 160 aa12.12□□□□□ -0.47
HMGB3P22-201ENST00000442010 LRP1Q07954 4544 aaKnown RBP12.12□□□□□ -0.47
HMGB3P22-201ENST00000442010 PKHD1L1Q86WI1 4243 aa12.11□□□□□ -0.47
HMGB3P22-201ENST00000442010 OR5A1Q8NGJ0 315 aa12.11□□□□□ -0.47
HMGB3P22-201ENST00000442010 FAM104BQ5XKR9 115 aa12.1□□□□□ -0.47
HMGB3P22-201ENST00000442010 MRPL52Q86TS9 123 aaKnown RBP12.1□□□□□ -0.47
HMGB3P22-201ENST00000442010 AP5S1Q9NUS5 200 aa12.1□□□□□ -0.47
HMGB3P22-201ENST00000442010 FOXI1Q12951 378 aa12.09□□□□□ -0.47
HMGB3P22-201ENST00000442010 CFAP161Q6P656 301 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms