RNA–Protein interactions for RNA: ENST00000440375.1

PDGFB-203, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-203ENST00000440375 TRGC1P0CF51 173 aa7.73□□□□□ -1.17
PDGFB-203ENST00000440375 RAB14P61106 215 aa7.73□□□□□ -1.17
PDGFB-203ENST00000440375 C14orf177Q52M58 125 aa7.73□□□□□ -1.17
PDGFB-203ENST00000440375 C20orf203Q8NBC4 194 aa7.73□□□□□ -1.17
PDGFB-203ENST00000440375 OCC1Q8TAD7 63 aa7.73□□□□□ -1.17
PDGFB-203ENST00000440375 DPH3P1Q9H4G8 78 aa7.73□□□□□ -1.17
PDGFB-203ENST00000440375 RPP21Q9H633 154 aaKnown RBP7.73□□□□□ -1.17
PDGFB-203ENST00000440375 TRAV26-2A0A0B4J265 109 aa7.72□□□□□ -1.17
PDGFB-203ENST00000440375 NDUFS6O75380 124 aaKnown RBP7.72□□□□□ -1.17
PDGFB-203ENST00000440375 REG3AQ06141 175 aa7.72□□□□□ -1.17
PDGFB-203ENST00000440375 PEA15Q15121 130 aa7.72□□□□□ -1.17
PDGFB-203ENST00000440375 GTSF1Q8WW33 167 aa7.72□□□□□ -1.17
PDGFB-203ENST00000440375 SMIM7Q9BQ49 75 aa7.72□□□□□ -1.17
PDGFB-203ENST00000440375 TMEM243Q9BU79 118 aa7.72□□□□□ -1.17
PDGFB-203ENST00000440375 CNFNQ9BYD5 112 aa7.72□□□□□ -1.17
PDGFB-203ENST00000440375 LRP1Q07954 4544 aaKnown RBP7.71□□□□□ -1.17
PDGFB-203ENST00000440375 ZNF727A8MUV8 499 aa7.71□□□□□ -1.18
PDGFB-203ENST00000440375 FOXA3P55318 350 aaPredicted RBP7.71□□□□□ -1.18
PDGFB-203ENST00000440375 CLLU1Q5K131 121 aa7.71□□□□□ -1.18
PDGFB-203ENST00000440375 NIT2Q9NQR4 276 aa7.71□□□□□ -1.18
PDGFB-203ENST00000440375 BIN3Q9NQY0 253 aa7.71□□□□□ -1.18
PDGFB-203ENST00000440375 PANO1I0J062 215 aa7.7□□□□□ -1.18
PDGFB-203ENST00000440375 TWIST1Q15672 202 aa7.7□□□□□ -1.18
PDGFB-203ENST00000440375 WDR73Q6P4I2 378 aa7.7□□□□□ -1.18
PDGFB-203ENST00000440375 GATD1Q8NB37 220 aa7.7□□□□□ -1.18
PDGFB-203ENST00000440375 PGLYRP4Q96LB8 373 aa7.7□□□□□ -1.18
PDGFB-203ENST00000440375 AMTP48728 403 aa7.69□□□□□ -1.18
PDGFB-203ENST00000440375 RPL39LQ96EH5 51 aaKnown RBP7.69□□□□□ -1.18
PDGFB-203ENST00000440375 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.69□□□□□ -1.18
PDGFB-203ENST00000440375 PKHD1L1Q86WI1 4243 aa7.68□□□□□ -1.18
PDGFB-203ENST00000440375 A0A1B0GUV1 79 aa7.68□□□□□ -1.18
PDGFB-203ENST00000440375 J3QL48 77 aa7.68□□□□□ -1.18
PDGFB-203ENST00000440375 COTL1Q14019 142 aa7.68□□□□□ -1.18
PDGFB-203ENST00000440375 LINC01551Q86U37 167 aa7.68□□□□□ -1.18
PDGFB-203ENST00000440375 SMDT1Q9H4I9 107 aa7.68□□□□□ -1.18
PDGFB-203ENST00000440375 FAM74A3Q4VXF1 159 aa7.67□□□□□ -1.18
PDGFB-203ENST00000440375 DGAT2L7PQ6IED9 249 aa7.67□□□□□ -1.18
PDGFB-203ENST00000440375 C9orf163Q8N9P6 203 aa7.67□□□□□ -1.18
PDGFB-203ENST00000440375 FAT3Q8TDW7 4589 aa7.67□□□□□ -1.18
PDGFB-203ENST00000440375 hDV102S1A0JD36 115 aa7.66□□□□□ -1.18
PDGFB-203ENST00000440375 KRTAP29-1A8MX34 341 aaPredicted RBP7.66□□□□□ -1.18
PDGFB-203ENST00000440375 UBE2L6O14933 153 aa7.66□□□□□ -1.18
PDGFB-203ENST00000440375 GATCO43716 136 aaKnown RBP7.66□□□□□ -1.18
PDGFB-203ENST00000440375 GAS8-AS1O95177 125 aa7.66□□□□□ -1.18
PDGFB-203ENST00000440375 TMEM241Q24JQ0 296 aa7.66□□□□□ -1.18
PDGFB-203ENST00000440375 SDIM1Q6ZPB5 146 aa7.66□□□□□ -1.18
PDGFB-203ENST00000440375 FAM231DQ6ZW35 169 aa7.66□□□□□ -1.18
PDGFB-203ENST00000440375 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.65□□□□□ -1.18
PDGFB-203ENST00000440375 TRAV8-4A0A0B4J246 113 aa7.65□□□□□ -1.18
PDGFB-203ENST00000440375 IGKV3OR2-268A0A0C4DH90 116 aa7.65□□□□□ -1.18
PDGFB-203ENST00000440375 IGKV2-29A2NJV5 120 aaPredicted RBP7.65□□□□□ -1.18
PDGFB-203ENST00000440375 SLPIP03973 132 aa7.65□□□□□ -1.18
PDGFB-203ENST00000440375 HNRNPA3P51991 378 aaKnown RBP7.65□□□□□ -1.18
PDGFB-203ENST00000440375 CNBPP62633 177 aaKnown RBP7.65□□□□□ -1.18
PDGFB-203ENST00000440375 RPL23P62829 140 aaKnown RBP7.65□□□□□ -1.18
PDGFB-203ENST00000440375 ADIRFQ15847 76 aa7.65□□□□□ -1.18
PDGFB-203ENST00000440375 NAT8Q9UHE5 227 aa7.65□□□□□ -1.18
PDGFB-203ENST00000440375 C15orf56Q8N910 161 aa7.64□□□□□ -1.19
PDGFB-203ENST00000440375 CLRN3Q8NCR9 226 aa7.64□□□□□ -1.19
PDGFB-203ENST00000440375 ISOC2Q96AB3 205 aa7.64□□□□□ -1.19
PDGFB-203ENST00000440375 GAGE12HA6NDE8 117 aa7.63□□□□□ -1.19
PDGFB-203ENST00000440375 SDHAF1A6NFY7 115 aa7.63□□□□□ -1.19
PDGFB-203ENST00000440375 A8MWL6 223 aa7.63□□□□□ -1.19
PDGFB-203ENST00000440375 CHTF8P0CG12 524 aa7.63□□□□□ -1.19
PDGFB-203ENST00000440375 RPL37AP61513 92 aaKnown RBP7.63□□□□□ -1.19
PDGFB-203ENST00000440375 CT83Q5H943 113 aa7.63□□□□□ -1.19
PDGFB-203ENST00000440375 SMIM15Q7Z3B0 74 aa7.63□□□□□ -1.19
PDGFB-203ENST00000440375 OSTCQ9NRP0 149 aa7.63□□□□□ -1.19
PDGFB-203ENST00000440375 FAM231BA6NCW3 169 aa7.62□□□□□ -1.19
PDGFB-203ENST00000440375 HIGD1CA8MV81 97 aa7.62□□□□□ -1.19
PDGFB-203ENST00000440375 APCSP02743 223 aa7.62□□□□□ -1.19
PDGFB-203ENST00000440375 FGF6P10767 208 aa7.62□□□□□ -1.19
PDGFB-203ENST00000440375 CIRBPQ14011 172 aaKnown RBP7.62□□□□□ -1.19
PDGFB-203ENST00000440375 RNASEKQ6P5S7 137 aaKnown RBP7.62□□□□□ -1.19
PDGFB-203ENST00000440375 COMMD7Q86VX2 200 aa7.62□□□□□ -1.19
PDGFB-203ENST00000440375 V9GYV3 84 aa7.62□□□□□ -1.19
PDGFB-203ENST00000440375 NCR2O95944 276 aa7.61□□□□□ -1.19
PDGFB-203ENST00000440375 RPS10P46783 165 aaKnown RBP7.61□□□□□ -1.19
PDGFB-203ENST00000440375 HIGD2BQ4VC39 106 aa7.61□□□□□ -1.19
PDGFB-203ENST00000440375 AMMECR1LQ6DCA0 310 aa7.61□□□□□ -1.19
PDGFB-203ENST00000440375 TSKUQ8WUA8 353 aa7.61□□□□□ -1.19
PDGFB-203ENST00000440375 CHCHD10Q8WYQ3 142 aaPredicted RBP7.61□□□□□ -1.19
PDGFB-203ENST00000440375 RNF185Q96GF1 192 aa7.61□□□□□ -1.19
PDGFB-203ENST00000440375 TMEM242Q9NWH2 141 aa7.61□□□□□ -1.19
PDGFB-203ENST00000440375 IGHV3-64A0A075B6Q5 118 aa7.6□□□□□ -1.19
PDGFB-203ENST00000440375 TRBV6-5A0A0K0K1A5 114 aa7.6□□□□□ -1.19
PDGFB-203ENST00000440375 A0A1B0GUT8 65 aa7.6□□□□□ -1.19
PDGFB-203ENST00000440375 TSHBP01222 138 aa7.6□□□□□ -1.19
PDGFB-203ENST00000440375 UQCC3Q6UW78 93 aa7.6□□□□□ -1.19
PDGFB-203ENST00000440375 AP5S1Q9NUS5 200 aa7.6□□□□□ -1.19
PDGFB-203ENST00000440375 HMCN2Q8NDA2 5059 aa7.59□□□□□ -1.19
PDGFB-203ENST00000440375 I3L3M4 83 aa7.59□□□□□ -1.19
PDGFB-203ENST00000440375 ADCYAP1P18509 176 aa7.59□□□□□ -1.19
PDGFB-203ENST00000440375 PMCHP20382 165 aa7.59□□□□□ -1.19
PDGFB-203ENST00000440375 AMN1Q8IY45 258 aa7.59□□□□□ -1.19
PDGFB-203ENST00000440375 SPACA4Q8TDM5 124 aa7.59□□□□□ -1.19
PDGFB-203ENST00000440375 A0A087WYN8 130 aa7.58□□□□□ -1.2
PDGFB-203ENST00000440375 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.58□□□□□ -1.2
PDGFB-203ENST00000440375 TMEM218A2RU14 115 aa7.58□□□□□ -1.2
PDGFB-203ENST00000440375 LINC00862A6NCI5 91 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms