RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 P01737 135 aa11.55□□□□□ -0.56
GTF3A-204ENST00000438571 EIF5AP63241 154 aaKnown RBP11.55□□□□□ -0.56
GTF3A-204ENST00000438571 DPH3P1Q9H4G8 78 aa11.55□□□□□ -0.56
GTF3A-204ENST00000438571 TRAV8-4A0A0B4J246 113 aa11.54□□□□□ -0.56
GTF3A-204ENST00000438571 NTF3P20783 257 aa11.54□□□□□ -0.56
GTF3A-204ENST00000438571 MEF2BQ02080 365 aaPredicted RBP11.54□□□□□ -0.56
GTF3A-204ENST00000438571 C15orf56Q8N910 161 aa11.54□□□□□ -0.56
GTF3A-204ENST00000438571 PGLYRP4Q96LB8 373 aa11.54□□□□□ -0.56
GTF3A-204ENST00000438571 NIT2Q9NQR4 276 aa11.54□□□□□ -0.56
GTF3A-204ENST00000438571 A0A087WYN8 130 aa11.53□□□□□ -0.56
GTF3A-204ENST00000438571 TRAV26-2A0A0B4J265 109 aa11.53□□□□□ -0.56
GTF3A-204ENST00000438571 TRGC1P0CF51 173 aa11.53□□□□□ -0.56
GTF3A-204ENST00000438571 CTRLP40313 264 aa11.53□□□□□ -0.56
GTF3A-204ENST00000438571 IGHV3-64A0A075B6Q5 118 aa11.52□□□□□ -0.57
GTF3A-204ENST00000438571 IGKV3OR2-268A0A0C4DH90 116 aa11.52□□□□□ -0.57
GTF3A-204ENST00000438571 IFNA1P01562 189 aa11.52□□□□□ -0.57
GTF3A-204ENST00000438571 AMTP48728 403 aa11.52□□□□□ -0.57
GTF3A-204ENST00000438571 SULT1A2P50226 295 aa11.52□□□□□ -0.57
GTF3A-204ENST00000438571 NUDT10Q8NFP7 164 aa11.52□□□□□ -0.57
GTF3A-204ENST00000438571 SPACA4Q8TDM5 124 aa11.52□□□□□ -0.57
GTF3A-204ENST00000438571 SMIM12Q96EX1 92 aa11.52□□□□□ -0.57
GTF3A-204ENST00000438571 NUDT11Q96G61 164 aa11.52□□□□□ -0.57
GTF3A-204ENST00000438571 MED9Q9NWA0 146 aa11.52□□□□□ -0.57
GTF3A-204ENST00000438571 GAGE12HA6NDE8 117 aa11.51□□□□□ -0.57
GTF3A-204ENST00000438571 F2Z2F3 143 aa11.51□□□□□ -0.57
GTF3A-204ENST00000438571 COTL1Q14019 142 aa11.51□□□□□ -0.57
GTF3A-204ENST00000438571 GATD1Q8NB37 220 aa11.51□□□□□ -0.57
GTF3A-204ENST00000438571 UBE2L6O14933 153 aa11.5□□□□□ -0.57
GTF3A-204ENST00000438571 BCL2P10415 239 aa11.5□□□□□ -0.57
GTF3A-204ENST00000438571 RPL39LQ96EH5 51 aaKnown RBP11.5□□□□□ -0.57
GTF3A-204ENST00000438571 RNASE7Q9H1E1 156 aaKnown RBP11.5□□□□□ -0.57
GTF3A-204ENST00000438571 AP5S1Q9NUS5 200 aa11.5□□□□□ -0.57
GTF3A-204ENST00000438571 XKRY2A2RUG3 117 aa11.49□□□□□ -0.57
GTF3A-204ENST00000438571 K7EN84 100 aa11.49□□□□□ -0.57
GTF3A-204ENST00000438571 PDE6DO43924 150 aa11.49□□□□□ -0.57
GTF3A-204ENST00000438571 FOXA3P55318 350 aaPredicted RBP11.49□□□□□ -0.57
GTF3A-204ENST00000438571 HIGD2BQ4VC39 106 aa11.49□□□□□ -0.57
GTF3A-204ENST00000438571 TWIST1Q15672 202 aa11.48□□□□□ -0.57
GTF3A-204ENST00000438571 WDR73Q6P4I2 378 aa11.48□□□□□ -0.57
GTF3A-204ENST00000438571 CNFNQ9BYD5 112 aa11.48□□□□□ -0.57
GTF3A-204ENST00000438571 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.47□□□□□ -0.57
GTF3A-204ENST00000438571 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.47□□□□□ -0.57
GTF3A-204ENST00000438571 IGKV2-29A2NJV5 120 aaPredicted RBP11.47□□□□□ -0.57
GTF3A-204ENST00000438571 PHOX2AO14813 284 aa11.47□□□□□ -0.57
GTF3A-204ENST00000438571 COX6A2Q02221 97 aa11.47□□□□□ -0.57
GTF3A-204ENST00000438571 Q6ZRU5 148 aa11.47□□□□□ -0.57
GTF3A-204ENST00000438571 RPP21Q9H633 154 aaKnown RBP11.47□□□□□ -0.57
GTF3A-204ENST00000438571 TEX46H3BTG2 121 aa11.46□□□□□ -0.57
GTF3A-204ENST00000438571 GTSF1Q8WW33 167 aa11.46□□□□□ -0.57
GTF3A-204ENST00000438571 DPH3Q96FX2 82 aa11.46□□□□□ -0.57
GTF3A-204ENST00000438571 SLC51BQ86UW2 128 aa11.45□□□□□ -0.58
GTF3A-204ENST00000438571 PRSS3P2Q8NHM4 247 aa11.45□□□□□ -0.58
GTF3A-204ENST00000438571 OCC1Q8TAD7 63 aa11.45□□□□□ -0.58
GTF3A-204ENST00000438571 CHCHD10Q8WYQ3 142 aaPredicted RBP11.45□□□□□ -0.58
GTF3A-204ENST00000438571 RNF185Q96GF1 192 aa11.45□□□□□ -0.58
GTF3A-204ENST00000438571 PLAC8Q9NZF1 115 aa11.45□□□□□ -0.58
GTF3A-204ENST00000438571 IGKV2-24A0A0C4DH68 120 aa11.44□□□□□ -0.58
GTF3A-204ENST00000438571 EIF5AL1Q6IS14 154 aaKnown RBP11.44□□□□□ -0.58
GTF3A-204ENST00000438571 BIN3Q9NQY0 253 aa11.44□□□□□ -0.58
GTF3A-204ENST00000438571 LRP2P98164 4655 aa11.44□□□□□ -0.58
GTF3A-204ENST00000438571 GAS8-AS1O95177 125 aa11.43□□□□□ -0.58
GTF3A-204ENST00000438571 RNASEKQ6P5S7 137 aaKnown RBP11.43□□□□□ -0.58
GTF3A-204ENST00000438571 APCSP02743 223 aa11.42□□□□□ -0.58
GTF3A-204ENST00000438571 FGF6P10767 208 aa11.42□□□□□ -0.58
GTF3A-204ENST00000438571 ODF1Q14990 250 aa11.42□□□□□ -0.58
GTF3A-204ENST00000438571 AMMECR1LQ6DCA0 310 aa11.42□□□□□ -0.58
GTF3A-204ENST00000438571 RPS10P46783 165 aaKnown RBP11.41□□□□□ -0.58
GTF3A-204ENST00000438571 FOXI1Q12951 378 aa11.41□□□□□ -0.58
GTF3A-204ENST00000438571 MAJINQ3KP22 176 aa11.41□□□□□ -0.58
GTF3A-204ENST00000438571 LINC00526Q96FQ7 95 aa11.41□□□□□ -0.58
GTF3A-204ENST00000438571 A0A096LNI7 61 aa11.4□□□□□ -0.58
GTF3A-204ENST00000438571 GVQW2A0A096LPI5 108 aaPredicted RBP11.4□□□□□ -0.58
GTF3A-204ENST00000438571 FAM231BA6NCW3 169 aa11.4□□□□□ -0.58
GTF3A-204ENST00000438571 SDHAF1A6NFY7 115 aa11.4□□□□□ -0.58
GTF3A-204ENST00000438571 NDUFS6O75380 124 aaKnown RBP11.4□□□□□ -0.58
GTF3A-204ENST00000438571 NCR2O95944 276 aa11.39□□□□□ -0.59
GTF3A-204ENST00000438571 CFAP161Q6P656 301 aa11.39□□□□□ -0.59
GTF3A-204ENST00000438571 ALKAL2Q6UX46 152 aa11.39□□□□□ -0.59
GTF3A-204ENST00000438571 PRR3P79522 188 aaKnown RBP11.38□□□□□ -0.59
GTF3A-204ENST00000438571 STPG4Q8N801 248 aa11.38□□□□□ -0.59
GTF3A-204ENST00000438571 LYPD6BQ8NI32 183 aa11.38□□□□□ -0.59
GTF3A-204ENST00000438571 GATCO43716 136 aaKnown RBP11.37□□□□□ -0.59
GTF3A-204ENST00000438571 XCL1P47992 114 aa11.37□□□□□ -0.59
GTF3A-204ENST00000438571 IFITM2Q01629 132 aa11.37□□□□□ -0.59
GTF3A-204ENST00000438571 OR5A1Q8NGJ0 315 aa11.37□□□□□ -0.59
GTF3A-204ENST00000438571 C7orf33Q8WU49 177 aa11.37□□□□□ -0.59
GTF3A-204ENST00000438571 RNF213Q63HN8 5207 aa11.37□□□□□ -0.59
GTF3A-204ENST00000438571 H7C423 109 aa11.36□□□□□ -0.59
GTF3A-204ENST00000438571 CCL25O15444 150 aa11.36□□□□□ -0.59
GTF3A-204ENST00000438571 TMEM242Q9NWH2 141 aa11.36□□□□□ -0.59
GTF3A-204ENST00000438571 LINC00959A0A1B0GUT2 108 aa11.35□□□□□ -0.59
GTF3A-204ENST00000438571 TSHBP01222 138 aa11.35□□□□□ -0.59
GTF3A-204ENST00000438571 ESDP10768 282 aa11.35□□□□□ -0.59
GTF3A-204ENST00000438571 PMCHP20382 165 aa11.35□□□□□ -0.59
GTF3A-204ENST00000438571 TAGLN2P37802 199 aaKnown RBP11.35□□□□□ -0.59
GTF3A-204ENST00000438571 TEX261Q6UWH6 196 aa11.35□□□□□ -0.59
GTF3A-204ENST00000438571 SMIM15Q7Z3B0 74 aa11.35□□□□□ -0.59
GTF3A-204ENST00000438571 TRBV6-5A0A0K0K1A5 114 aa11.34□□□□□ -0.59
GTF3A-204ENST00000438571 I3L3M4 83 aa11.34□□□□□ -0.59
GTF3A-204ENST00000438571 FAM231DQ6ZW35 169 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms