RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 FCER1GP30273 86 aa12.61□□□□□ -0.39
HDAC6-208ENST00000438518 AMTP48728 403 aa12.61□□□□□ -0.39
HDAC6-208ENST00000438518 Q8N8P6 123 aa12.61□□□□□ -0.39
HDAC6-208ENST00000438518 TMEM243Q9BU79 118 aa12.61□□□□□ -0.39
HDAC6-208ENST00000438518 H7C423 109 aa12.6□□□□□ -0.39
HDAC6-208ENST00000438518 TSHBP01222 138 aa12.6□□□□□ -0.39
HDAC6-208ENST00000438518 TRGC2P03986 189 aa12.6□□□□□ -0.39
HDAC6-208ENST00000438518 Q9H8V8 135 aa12.6□□□□□ -0.39
HDAC6-208ENST00000438518 IGLV2-18A0A075B6J9 118 aa12.59□□□□□ -0.39
HDAC6-208ENST00000438518 LCE6AA0A183 80 aa12.59□□□□□ -0.39
HDAC6-208ENST00000438518 DNAH10OSP0CZ25 163 aa12.59□□□□□ -0.39
HDAC6-208ENST00000438518 VPS13DQ5THJ4 4388 aa12.58□□□□□ -0.4
HDAC6-208ENST00000438518 LOC389332A0A1B0GUA5 103 aa12.58□□□□□ -0.4
HDAC6-208ENST00000438518 ESDP10768 282 aa12.58□□□□□ -0.4
HDAC6-208ENST00000438518 SMAGPQ0VAQ4 97 aa12.58□□□□□ -0.4
HDAC6-208ENST00000438518 LINC01556Q5JQF7 62 aa12.58□□□□□ -0.4
HDAC6-208ENST00000438518 WFDC10BQ8IUB3 73 aa12.58□□□□□ -0.4
HDAC6-208ENST00000438518 PRSS3P2Q8NHM4 247 aa12.58□□□□□ -0.4
HDAC6-208ENST00000438518 TMEM18Q96B42 140 aa12.58□□□□□ -0.4
HDAC6-208ENST00000438518 CHCHD5Q9BSY4 110 aa12.58□□□□□ -0.4
HDAC6-208ENST00000438518 UBE2L6O14933 153 aa12.57□□□□□ -0.4
HDAC6-208ENST00000438518 G0S2P27469 103 aa12.57□□□□□ -0.4
HDAC6-208ENST00000438518 ORMDL2Q53FV1 153 aa12.57□□□□□ -0.4
HDAC6-208ENST00000438518 TTC32Q5I0X7 151 aa12.57□□□□□ -0.4
HDAC6-208ENST00000438518 C18orf32Q8TCD1 76 aa12.57□□□□□ -0.4
HDAC6-208ENST00000438518 ALMS1Q8TCU4 4167 aa12.57□□□□□ -0.4
HDAC6-208ENST00000438518 TRAV9-2A0A087WT02 112 aa12.56□□□□□ -0.4
HDAC6-208ENST00000438518 RAB5BP61020 215 aa12.56□□□□□ -0.4
HDAC6-208ENST00000438518 NIT1Q86X76 327 aa12.56□□□□□ -0.4
HDAC6-208ENST00000438518 C10orf126Q8N4M7 172 aa12.56□□□□□ -0.4
HDAC6-208ENST00000438518 LYSTQ99698 3801 aa12.56□□□□□ -0.4
HDAC6-208ENST00000438518 A0A087WX48 190 aa12.55□□□□□ -0.4
HDAC6-208ENST00000438518 IFI27P40305 119 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-208ENST00000438518 LINC01546A6NGU7 62 aa12.54□□□□□ -0.4
HDAC6-208ENST00000438518 LINC01549A6NIU2 74 aa12.54□□□□□ -0.4
HDAC6-208ENST00000438518 ZNF25P17030 456 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-208ENST00000438518 LAGE3Q14657 143 aa12.54□□□□□ -0.4
HDAC6-208ENST00000438518 DNAH1Q9P2D7 4330 aa12.53□□□□□ -0.4
HDAC6-208ENST00000438518 A0A1B0GUV1 79 aa12.53□□□□□ -0.4
HDAC6-208ENST00000438518 TMEM262E9PQX1 116 aa12.53□□□□□ -0.4
HDAC6-208ENST00000438518 FA2HQ7L5A8 372 aa12.53□□□□□ -0.4
HDAC6-208ENST00000438518 C20orf203Q8NBC4 194 aa12.53□□□□□ -0.4
HDAC6-208ENST00000438518 LINC00614P0C842 121 aa12.52□□□□□ -0.41
HDAC6-208ENST00000438518 BTF3P20290 206 aaKnown RBP12.52□□□□□ -0.41
HDAC6-208ENST00000438518 Q0VG73 95 aa12.52□□□□□ -0.41
HDAC6-208ENST00000438518 MRPL52Q86TS9 123 aaKnown RBP12.52□□□□□ -0.41
HDAC6-208ENST00000438518 AP5S1Q9NUS5 200 aa12.52□□□□□ -0.41
HDAC6-208ENST00000438518 NBDYA0A0U1RRE5 68 aa12.51□□□□□ -0.41
HDAC6-208ENST00000438518 GAGE6Q13070 117 aa12.51□□□□□ -0.41
HDAC6-208ENST00000438518 AMMECR1LQ6DCA0 310 aa12.51□□□□□ -0.41
HDAC6-208ENST00000438518 DEFB104AQ8WTQ1 72 aa12.51□□□□□ -0.41
HDAC6-208ENST00000438518 MPV17L2Q567V2 206 aa12.5□□□□□ -0.41
HDAC6-208ENST00000438518 CHCHD1Q96BP2 118 aaKnown RBP12.5□□□□□ -0.41
HDAC6-208ENST00000438518 TIMM21Q9BVV7 248 aa12.5□□□□□ -0.41
HDAC6-208ENST00000438518 CSDC2Q9Y534 153 aaKnown RBP12.5□□□□□ -0.41
HDAC6-208ENST00000438518 SACSQ9NZJ4 4579 aa12.49□□□□□ -0.41
HDAC6-208ENST00000438518 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-208ENST00000438518 IGKV2-29A2NJV5 120 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-208ENST00000438518 FGF6P10767 208 aa12.49□□□□□ -0.41
HDAC6-208ENST00000438518 RBX1P62877 108 aa12.49□□□□□ -0.41
HDAC6-208ENST00000438518 TMEM101Q96IK0 257 aa12.49□□□□□ -0.41
HDAC6-208ENST00000438518 CYSLTR1Q9Y271 337 aa12.49□□□□□ -0.41
HDAC6-208ENST00000438518 C1orf196B1AJZ1 125 aa12.48□□□□□ -0.41
HDAC6-208ENST00000438518 IGHV3-30P01768 117 aa12.48□□□□□ -0.41
HDAC6-208ENST00000438518 IGHV3-33P01772 117 aa12.48□□□□□ -0.41
HDAC6-208ENST00000438518 IGHV3-30-3P0DP02 117 aa12.48□□□□□ -0.41
HDAC6-208ENST00000438518 IGHV3-30-5P0DP03 117 aa12.48□□□□□ -0.41
HDAC6-208ENST00000438518 BAGE3Q86Y29 109 aa12.48□□□□□ -0.41
HDAC6-208ENST00000438518 SPANXA1Q9NS26 97 aa12.48□□□□□ -0.41
HDAC6-208ENST00000438518 IBA57-AS1B1ANH7 110 aa12.47□□□□□ -0.41
HDAC6-208ENST00000438518 NPSP0C0P6 89 aa12.47□□□□□ -0.41
HDAC6-208ENST00000438518 UBE2D4Q9Y2X8 147 aa12.47□□□□□ -0.41
HDAC6-208ENST00000438518 PYGO1Q9Y3Y4 419 aa12.47□□□□□ -0.41
HDAC6-208ENST00000438518 HIST1H2BKO60814 126 aa12.46□□□□□ -0.41
HDAC6-208ENST00000438518 HIST1H2BJP06899 126 aa12.46□□□□□ -0.41
HDAC6-208ENST00000438518 HIST1H2BOP23527 126 aa12.46□□□□□ -0.41
HDAC6-208ENST00000438518 HIST1H2BBP33778 126 aa12.46□□□□□ -0.41
HDAC6-208ENST00000438518 HIST1H2BDP58876 126 aa12.46□□□□□ -0.41
HDAC6-208ENST00000438518 HIST1H2BCP62807 126 aa12.46□□□□□ -0.41
HDAC6-208ENST00000438518 HIST2H2BEQ16778 126 aa12.46□□□□□ -0.41
HDAC6-208ENST00000438518 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.46□□□□□ -0.41
HDAC6-208ENST00000438518 DGAT2L7PQ6IED9 249 aa12.46□□□□□ -0.41
HDAC6-208ENST00000438518 RNASEKQ6P5S7 137 aaKnown RBP12.46□□□□□ -0.41
HDAC6-208ENST00000438518 C2orf66Q6UXQ4 117 aa12.46□□□□□ -0.41
HDAC6-208ENST00000438518 Q6ZR54 194 aa12.46□□□□□ -0.41
HDAC6-208ENST00000438518 HIST1H2BHQ93079 126 aa12.46□□□□□ -0.41
HDAC6-208ENST00000438518 URB1-AS1Q96HZ7 61 aa12.46□□□□□ -0.41
HDAC6-208ENST00000438518 HIST1H2BNQ99877 126 aa12.46□□□□□ -0.41
HDAC6-208ENST00000438518 HIST1H2BMQ99879 126 aa12.46□□□□□ -0.41
HDAC6-208ENST00000438518 ANGP03950 147 aaKnown RBP12.45□□□□□ -0.42
HDAC6-208ENST00000438518 Q8N976 141 aa12.45□□□□□ -0.42
HDAC6-208ENST00000438518 OR5A1Q8NGJ0 315 aa12.45□□□□□ -0.42
HDAC6-208ENST00000438518 CRPP02741 224 aa12.44□□□□□ -0.42
HDAC6-208ENST00000438518 TOMM6Q96B49 74 aa12.44□□□□□ -0.42
HDAC6-208ENST00000438518 TRAV8-3A0A0A6YYJ7 113 aa12.43□□□□□ -0.42
HDAC6-208ENST00000438518 HSBP1O75506 76 aa12.43□□□□□ -0.42
HDAC6-208ENST00000438518 HBDP02042 147 aa12.43□□□□□ -0.42
HDAC6-208ENST00000438518 RPL39P62891 51 aaKnown RBP12.43□□□□□ -0.42
HDAC6-208ENST00000438518 MRPS36P82909 103 aaKnown RBP12.43□□□□□ -0.42
HDAC6-208ENST00000438518 NFE4Q86UQ8 179 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms