RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 M0R2P5 195 aa8.61□□□□□ -1.03
CD44-209ENST00000433892 C10orf126Q8N4M7 172 aa8.61□□□□□ -1.03
CD44-209ENST00000433892 PRO1854Q9UHT4 67 aa8.61□□□□□ -1.03
CD44-209ENST00000433892 A4D1N5 150 aa8.61□□□□□ -1.03
CD44-209ENST00000433892 AZU1P20160 251 aa8.61□□□□□ -1.03
CD44-209ENST00000433892 Q5PR19 223 aa8.61□□□□□ -1.03
CD44-209ENST00000433892 SETD2Q9BYW2 2564 aaPredicted RBP8.61□□□□□ -1.03
CD44-209ENST00000433892 A8MTW9 85 aa8.6□□□□□ -1.03
CD44-209ENST00000433892 ADARB2-AS1A8MUL3 147 aa8.6□□□□□ -1.03
CD44-209ENST00000433892 A8MWV9 139 aa8.6□□□□□ -1.03
CD44-209ENST00000433892 TCL1BO95988 128 aa8.6□□□□□ -1.03
CD44-209ENST00000433892 SIGMAR1Q99720 223 aa8.6□□□□□ -1.03
CD44-209ENST00000433892 EDA2RQ9HAV5 297 aa8.6□□□□□ -1.03
CD44-209ENST00000433892 PYGO1Q9Y3Y4 419 aa8.6□□□□□ -1.03
CD44-209ENST00000433892 NACAE9PAV3 2078 aa8.6□□□□□ -1.03
CD44-209ENST00000433892 MUSTN1Q8IVN3 82 aa8.6□□□□□ -1.03
CD44-209ENST00000433892 DYNLRB2Q8TF09 96 aa8.6□□□□□ -1.03
CD44-209ENST00000433892 PTH2Q96A98 100 aa8.6□□□□□ -1.03
CD44-209ENST00000433892 RAX2Q96IS3 184 aa8.6□□□□□ -1.03
CD44-209ENST00000433892 LINC01587Q99440 93 aa8.6□□□□□ -1.03
CD44-209ENST00000433892 MAP6D1Q9H9H5 199 aa8.6□□□□□ -1.03
CD44-209ENST00000433892 PEMTQ9UBM1 199 aa8.6□□□□□ -1.03
CD44-209ENST00000433892 EIF4EBP3O60516 100 aaPredicted RBP8.59□□□□□ -1.03
CD44-209ENST00000433892 SCGB1C2P0DMR2 95 aa8.59□□□□□ -1.03
CD44-209ENST00000433892 IGHV3-30-3P0DP02 117 aa8.59□□□□□ -1.03
CD44-209ENST00000433892 ZNF415Q09FC8 603 aa8.59□□□□□ -1.03
CD44-209ENST00000433892 SMAGPQ0VAQ4 97 aa8.59□□□□□ -1.03
CD44-209ENST00000433892 LYRM7Q5U5X0 104 aa8.59□□□□□ -1.03
CD44-209ENST00000433892 C1QTNF4Q9BXJ3 329 aa8.59□□□□□ -1.03
CD44-209ENST00000433892 TRAV8-3A0A0A6YYJ7 113 aa8.59□□□□□ -1.03
CD44-209ENST00000433892 H7C2G1 150 aa8.59□□□□□ -1.03
CD44-209ENST00000433892 FOXI1Q12951 378 aa8.59□□□□□ -1.03
CD44-209ENST00000433892 Q8N2B8 174 aa8.59□□□□□ -1.03
CD44-209ENST00000433892 C4orf3Q8WVX3 66 aa8.59□□□□□ -1.03
CD44-209ENST00000433892 BBC3Q96PG8 261 aaPredicted RBP8.59□□□□□ -1.03
CD44-209ENST00000433892 ITPR3Q14573 2671 aa8.58□□□□□ -1.04
CD44-209ENST00000433892 WNK1Q9H4A3 2382 aa8.58□□□□□ -1.04
CD44-209ENST00000433892 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.58□□□□□ -1.04
CD44-209ENST00000433892 IGHV3-38A0A0C4DH36 116 aa8.58□□□□□ -1.04
CD44-209ENST00000433892 A0A0J9YXY3 114 aa8.58□□□□□ -1.04
CD44-209ENST00000433892 IGKV2-29A2NJV5 120 aaPredicted RBP8.58□□□□□ -1.04
CD44-209ENST00000433892 MRPS36P82909 103 aaKnown RBP8.58□□□□□ -1.04
CD44-209ENST00000433892 SPATA25Q9BR10 227 aa8.58□□□□□ -1.04
CD44-209ENST00000433892 TIMM21Q9BVV7 248 aa8.58□□□□□ -1.04
CD44-209ENST00000433892 PRRC2AP48634 2157 aaKnown RBP8.57□□□□□ -1.04
CD44-209ENST00000433892 C11orf72Q8NBR9 251 aa8.57□□□□□ -1.04
CD44-209ENST00000433892 Q96MF0 132 aa8.57□□□□□ -1.04
CD44-209ENST00000433892 CHCHD7Q9BUK0 85 aa8.57□□□□□ -1.04
CD44-209ENST00000433892 TRBV20-1A0A075B6N2 111 aa8.57□□□□□ -1.04
CD44-209ENST00000433892 DEFB114Q30KQ6 69 aa8.57□□□□□ -1.04
CD44-209ENST00000433892 DEFB113Q30KQ7 82 aa8.57□□□□□ -1.04
CD44-209ENST00000433892 TMEM263Q8WUH6 116 aaKnown RBP8.57□□□□□ -1.04
CD44-209ENST00000433892 IGHV3-33P01772 117 aa8.56□□□□□ -1.04
CD44-209ENST00000433892 UBE2D4Q9Y2X8 147 aa8.56□□□□□ -1.04
CD44-209ENST00000433892 CCDC168Q8NDH2 2452 aa8.56□□□□□ -1.04
CD44-209ENST00000433892 NOTCH3Q9UM47 2321 aa8.56□□□□□ -1.04
CD44-209ENST00000433892 A8MZ25 164 aa8.56□□□□□ -1.04
CD44-209ENST00000433892 PIK3CD-AS1Q5SR53 167 aa8.56□□□□□ -1.04
CD44-209ENST00000433892 ATP6V0E2Q8NHE4 81 aa8.56□□□□□ -1.04
CD44-209ENST00000433892 LINC00467Q9BRT7 94 aa8.56□□□□□ -1.04
CD44-209ENST00000433892 XCL2Q9UBD3 114 aa8.56□□□□□ -1.04
CD44-209ENST00000433892 INSP01308 110 aa8.55□□□□□ -1.04
CD44-209ENST00000433892 CRYBA4P53673 196 aa8.55□□□□□ -1.04
CD44-209ENST00000433892 Q6ZUT4 128 aa8.55□□□□□ -1.04
CD44-209ENST00000433892 C11orf44Q8N8P7 122 aa8.55□□□□□ -1.04
CD44-209ENST00000433892 ERG28Q9UKR5 140 aa8.55□□□□□ -1.04
CD44-209ENST00000433892 IGHV3OR16-12A0A075B7B8 117 aa8.55□□□□□ -1.04
CD44-209ENST00000433892 IGHV1-58A0A0C4DH39 117 aa8.55□□□□□ -1.04
CD44-209ENST00000433892 IGHV3-53P01767 116 aa8.55□□□□□ -1.04
CD44-209ENST00000433892 PRSS2P07478 247 aa8.55□□□□□ -1.04
CD44-209ENST00000433892 SPINK8P0C7L1 97 aa8.55□□□□□ -1.04
CD44-209ENST00000433892 LITAFQ99732 161 aa8.55□□□□□ -1.04
CD44-209ENST00000433892 SETXQ7Z333 2677 aaKnown RBP8.54□□□□□ -1.04
CD44-209ENST00000433892 A0A0B4J2C4 111 aa8.54□□□□□ -1.04
CD44-209ENST00000433892 TINCRA0A1B0GVN0 87 aa8.54□□□□□ -1.04
CD44-209ENST00000433892 CARD19Q96LW7 228 aa8.54□□□□□ -1.04
CD44-209ENST00000433892 SPANXA1Q9NS26 97 aa8.54□□□□□ -1.04
CD44-209ENST00000433892 NDUFA12Q9UI09 145 aa8.54□□□□□ -1.04
CD44-209ENST00000433892 FLNAP21333 2647 aaKnown RBP8.54□□□□□ -1.04
CD44-209ENST00000433892 JMJD1CQ15652 2540 aa8.54□□□□□ -1.04
CD44-209ENST00000433892 BEAN1Q3B7T3 259 aa8.54□□□□□ -1.04
CD44-209ENST00000433892 ADAMTSL4-AS1Q5T5F5 129 aa8.54□□□□□ -1.04
CD44-209ENST00000433892 TEN1Q86WV5 123 aa8.54□□□□□ -1.04
CD44-209ENST00000433892 A0A1W2PRX2 142 aa8.53□□□□□ -1.04
CD44-209ENST00000433892 Q1RN00 199 aa8.53□□□□□ -1.04
CD44-209ENST00000433892 ODF3L2Q3SX64 289 aa8.53□□□□□ -1.04
CD44-209ENST00000433892 VSIG2Q96IQ7 327 aa8.53□□□□□ -1.04
CD44-209ENST00000433892 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.52□□□□□ -1.04
CD44-209ENST00000433892 SBSPONQ8IVN8 264 aa8.52□□□□□ -1.04
CD44-209ENST00000433892 ZNF843Q8N446 348 aa8.52□□□□□ -1.04
CD44-209ENST00000433892 RS1O15537 224 aa8.52□□□□□ -1.05
CD44-209ENST00000433892 SCGB1A1P11684 91 aa8.52□□□□□ -1.05
CD44-209ENST00000433892 NPC2P61916 151 aa8.52□□□□□ -1.05
CD44-209ENST00000433892 FHL3Q13643 280 aa8.52□□□□□ -1.05
CD44-209ENST00000433892 Q6ZSV7 163 aa8.52□□□□□ -1.05
CD44-209ENST00000433892 PPDPFLQ8WWR9 84 aa8.52□□□□□ -1.05
CD44-209ENST00000433892 DNAJC30Q96LL9 226 aa8.52□□□□□ -1.05
CD44-209ENST00000433892 GEMIN7Q9H840 131 aaKnown RBP8.52□□□□□ -1.05
CD44-209ENST00000433892 C2CD3Q4AC94 2353 aa8.51□□□□□ -1.05
CD44-209ENST00000433892 C9JAW5 83 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms