RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 CACNA1DQ01668 2161 aa1.45□□□□□ -2.18
CLK1-204ENST00000432425 KIAA0100Q14667 2235 aaKnown RBP1.45□□□□□ -2.18
CLK1-204ENST00000432425 FREM3P0C091 2139 aa1.45□□□□□ -2.18
CLK1-204ENST00000432425 MYO7BQ6PIF6 2116 aa1.45□□□□□ -2.18
CLK1-204ENST00000432425 C1orf167Q5SNV9 1468 aa1.45□□□□□ -2.18
CLK1-204ENST00000432425 SIP14410 1827 aa1.45□□□□□ -2.18
CLK1-204ENST00000432425 TRAV13-2A0A0B4J235 113 aa1.45□□□□□ -2.18
CLK1-204ENST00000432425 F2Z2F3 143 aa1.45□□□□□ -2.18
CLK1-204ENST00000432425 H3BPC8 53 aa1.45□□□□□ -2.18
CLK1-204ENST00000432425 SMIM13P0DJ93 91 aa1.45□□□□□ -2.18
CLK1-204ENST00000432425 NHP2Q9NX24 153 aaKnown RBP1.45□□□□□ -2.18
CLK1-204ENST00000432425 ABCC1P33527 1531 aa1.44□□□□□ -2.18
CLK1-204ENST00000432425 UNC13BO14795 1591 aa1.44□□□□□ -2.18
CLK1-204ENST00000432425 PRR14LQ5THK1 2151 aa1.44□□□□□ -2.18
CLK1-204ENST00000432425 IGHV1-18A0A0C4DH31 117 aa1.44□□□□□ -2.18
CLK1-204ENST00000432425 TCRBV4S1A1TA0A5B7 111 aa1.44□□□□□ -2.18
CLK1-204ENST00000432425 FXYD2P54710 66 aa1.44□□□□□ -2.18
CLK1-204ENST00000432425 DSCR4P56555 118 aaPredicted RBP1.44□□□□□ -2.18
CLK1-204ENST00000432425 SNRPFP62306 86 aaKnown RBP1.44□□□□□ -2.18
CLK1-204ENST00000432425 MIR22HGQ0VDD5 57 aa1.44□□□□□ -2.18
CLK1-204ENST00000432425 ZNF56Q15929 161 aa1.44□□□□□ -2.18
CLK1-204ENST00000432425 DEFB113Q30KQ7 82 aa1.44□□□□□ -2.18
CLK1-204ENST00000432425 Q8TAT8 98 aa1.44□□□□□ -2.18
CLK1-204ENST00000432425 HILPDAQ9Y5L2 63 aa1.44□□□□□ -2.18
CLK1-204ENST00000432425 FAM215AQ9Y5M1 114 aa1.44□□□□□ -2.18
CLK1-204ENST00000432425 HMGXB3Q12766 1538 aa1.44□□□□□ -2.18
CLK1-204ENST00000432425 NEXMIFQ5QGS0 1516 aa1.44□□□□□ -2.18
CLK1-204ENST00000432425 KCPQ6ZWJ8 1503 aa1.44□□□□□ -2.18
CLK1-204ENST00000432425 MYOM1P52179 1685 aa1.44□□□□□ -2.18
CLK1-204ENST00000432425 MUC5BQ9HC84 5762 aaPredicted RBP1.44□□□□□ -2.18
CLK1-204ENST00000432425 PLCH1Q4KWH8 1693 aa1.43□□□□□ -2.18
CLK1-204ENST00000432425 TRBV10-3A0A0K0K1G6 114 aa1.43□□□□□ -2.18
CLK1-204ENST00000432425 TEX49A0A1B0GTD5 131 aa1.43□□□□□ -2.18
CLK1-204ENST00000432425 A6NIN4 97 aa1.43□□□□□ -2.18
CLK1-204ENST00000432425 NDUFC1O43677 76 aa1.43□□□□□ -2.18
CLK1-204ENST00000432425 CXCL8P10145 99 aa1.43□□□□□ -2.18
CLK1-204ENST00000432425 ZNF791Q3KP31 576 aaPredicted RBP1.43□□□□□ -2.18
CLK1-204ENST00000432425 XAF1Q6GPH4 301 aa1.43□□□□□ -2.18
CLK1-204ENST00000432425 Q6ZS52 159 aa1.43□□□□□ -2.18
CLK1-204ENST00000432425 ZCCHC13Q8WW36 166 aaKnown RBP1.43□□□□□ -2.18
CLK1-204ENST00000432425 LINC01600Q96MT4 127 aa1.43□□□□□ -2.18
CLK1-204ENST00000432425 PROK2Q9HC23 129 aa1.43□□□□□ -2.18
CLK1-204ENST00000432425 CDC42SE1Q9NRR8 79 aa1.43□□□□□ -2.18
CLK1-204ENST00000432425 IQSEC2Q5JU85 1478 aa1.43□□□□□ -2.18
CLK1-204ENST00000432425 LRRC9Q6ZRR7 1453 aa1.43□□□□□ -2.18
CLK1-204ENST00000432425 SYCP2Q9BX26 1530 aa1.43□□□□□ -2.18
CLK1-204ENST00000432425 GPR98Q8WXG9 6306 aa1.43□□□□□ -2.18
CLK1-204ENST00000432425 SCN7AQ01118 1682 aa1.43□□□□□ -2.18
CLK1-204ENST00000432425 TRAV22A0A0B4J277 110 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 PIGBOS1A0A0B4J2F0 54 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 POLR1AO95602 1720 aaPredicted RBP1.42□□□□□ -2.18
CLK1-204ENST00000432425 CR1P17927 2039 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 KLKP1Q107X0 134 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 TMEM170BQ5T4T1 132 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 Q5VV11 94 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 SPINT4Q6UDR6 99 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 VMO1Q7Z5L0 202 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 LINC00643Q86TS7 51 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 LYPD6Q86Y78 171 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 Q8N6K4 173 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 Q8NAQ8 132 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 TVP23CQ96ET8 276 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 C14orf132Q9NPU4 83 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 V9GYH0 126 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 CEP192Q8TEP8 1941 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 KIAA0556O60303 1618 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 PI4KAP42356 2102 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 TET1Q8NFU7 2136 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 WIZO95785 1651 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 ZNF142P52746 1687 aaPredicted RBP1.42□□□□□ -2.18
CLK1-204ENST00000432425 TRAV10A0A0B4J240 114 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 IQCF6A8MYZ5 107 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 C10orf142B7Z368 130 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 E7EUB6 86 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 F8WEM9 126 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 IGHV3-53P01767 116 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 IGLV7-43P04211 117 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 C3orf79P0CE67 100 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 UBE2D3P61077 147 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 UBE2D2P62837 147 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 ZNF826PQ6ZT77 177 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 C20orf197Q8N268 126 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 ST20-AS1Q8NBB2 130 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 IFI27L1Q96BM0 104 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 CYP4F30PQ9H0H9 118 aa1.42□□□□□ -2.18
CLK1-204ENST00000432425 CDC42BPAQ5VT25 1732 aa1.41□□□□□ -2.18
CLK1-204ENST00000432425 LOC285556D6RIA3 1793 aa1.41□□□□□ -2.18
CLK1-204ENST00000432425 COL14A1Q05707 1796 aaKnown RBP1.41□□□□□ -2.18
CLK1-204ENST00000432425 PCDH15Q96QU1 1955 aa1.41□□□□□ -2.18
CLK1-204ENST00000432425 MED12Q93074 2177 aa1.41□□□□□ -2.18
CLK1-204ENST00000432425 FXYD6-FXYD2A0A087WZ82 144 aa1.41□□□□□ -2.18
CLK1-204ENST00000432425 TRBV7-1A0A0A6YYK4 115 aa1.41□□□□□ -2.18
CLK1-204ENST00000432425 CXorf51AA0A1B0GTR3 108 aa1.41□□□□□ -2.18
CLK1-204ENST00000432425 SDHAF1A6NFY7 115 aa1.41□□□□□ -2.18
CLK1-204ENST00000432425 FAM223BA6NKX1 122 aa1.41□□□□□ -2.18
CLK1-204ENST00000432425 CHKB-CPT1BH3BT56 60 aa1.41□□□□□ -2.18
CLK1-204ENST00000432425 ACYP1P07311 99 aa1.41□□□□□ -2.18
CLK1-204ENST00000432425 COX8AP10176 69 aa1.41□□□□□ -2.18
CLK1-204ENST00000432425 SPINT3P49223 89 aa1.41□□□□□ -2.18
CLK1-204ENST00000432425 EDDM3BP56851 147 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms