RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 K7EMI3 77 aa7.55□□□□□ -1.2
CHD4-202ENST00000430771 SIVA1O15304 175 aa7.55□□□□□ -1.2
CHD4-202ENST00000430771 TSHBP01222 138 aa7.55□□□□□ -1.2
CHD4-202ENST00000430771 TRGC2P03986 189 aa7.55□□□□□ -1.2
CHD4-202ENST00000430771 WFDC10BQ8IUB3 73 aa7.55□□□□□ -1.2
CHD4-202ENST00000430771 Q8N8P6 123 aa7.55□□□□□ -1.2
CHD4-202ENST00000430771 CHCHD5Q9BSY4 110 aa7.55□□□□□ -1.2
CHD4-202ENST00000430771 CHCHD7Q9BUK0 85 aa7.55□□□□□ -1.2
CHD4-202ENST00000430771 LYSTQ99698 3801 aa7.54□□□□□ -1.2
CHD4-202ENST00000430771 DNAH6Q9C0G6 4158 aa7.54□□□□□ -1.2
CHD4-202ENST00000430771 DNAH1Q9P2D7 4330 aa7.54□□□□□ -1.2
CHD4-202ENST00000430771 LCE6AA0A183 80 aa7.54□□□□□ -1.2
CHD4-202ENST00000430771 SMAGPQ0VAQ4 97 aa7.54□□□□□ -1.2
CHD4-202ENST00000430771 TTC32Q5I0X7 151 aa7.54□□□□□ -1.2
CHD4-202ENST00000430771 NTM-AS1Q6ZSK4 140 aa7.54□□□□□ -1.2
CHD4-202ENST00000430771 TMEM18Q96B42 140 aa7.54□□□□□ -1.2
CHD4-202ENST00000430771 TENM2Q9NT68 2774 aa7.54□□□□□ -1.2
CHD4-202ENST00000430771 IGLV2-18A0A075B6J9 118 aa7.53□□□□□ -1.2
CHD4-202ENST00000430771 H7C423 109 aa7.53□□□□□ -1.2
CHD4-202ENST00000430771 K7EP13 123 aa7.53□□□□□ -1.2
CHD4-202ENST00000430771 DNAH10OSP0CZ25 163 aa7.53□□□□□ -1.2
CHD4-202ENST00000430771 ORMDL2Q53FV1 153 aa7.53□□□□□ -1.2
CHD4-202ENST00000430771 LINC01556Q5JQF7 62 aa7.53□□□□□ -1.2
CHD4-202ENST00000430771 FA2HQ7L5A8 372 aa7.53□□□□□ -1.2
CHD4-202ENST00000430771 C10orf126Q8N4M7 172 aa7.53□□□□□ -1.2
CHD4-202ENST00000430771 PRSS3P2Q8NHM4 247 aa7.53□□□□□ -1.2
CHD4-202ENST00000430771 C18orf32Q8TCD1 76 aa7.53□□□□□ -1.2
CHD4-202ENST00000430771 Q9H8V8 135 aa7.53□□□□□ -1.2
CHD4-202ENST00000430771 A0A087WX48 190 aa7.52□□□□□ -1.21
CHD4-202ENST00000430771 IFI27P40305 119 aaPredicted RBP7.52□□□□□ -1.21
CHD4-202ENST00000430771 RAB5BP61020 215 aa7.52□□□□□ -1.21
CHD4-202ENST00000430771 GAGE6Q13070 117 aa7.52□□□□□ -1.21
CHD4-202ENST00000430771 NIT1Q86X76 327 aa7.52□□□□□ -1.21
CHD4-202ENST00000430771 DEFB104AQ8WTQ1 72 aa7.52□□□□□ -1.21
CHD4-202ENST00000430771 VPS13DQ5THJ4 4388 aa7.52□□□□□ -1.21
CHD4-202ENST00000430771 TRAV9-2A0A087WT02 112 aa7.51□□□□□ -1.21
CHD4-202ENST00000430771 TMEM262E9PQX1 116 aa7.51□□□□□ -1.21
CHD4-202ENST00000430771 ESDP10768 282 aa7.51□□□□□ -1.21
CHD4-202ENST00000430771 ZNF25P17030 456 aaPredicted RBP7.51□□□□□ -1.21
CHD4-202ENST00000430771 G0S2P27469 103 aa7.51□□□□□ -1.21
CHD4-202ENST00000430771 LAGE3Q14657 143 aa7.51□□□□□ -1.21
CHD4-202ENST00000430771 AMMECR1LQ6DCA0 310 aa7.51□□□□□ -1.21
CHD4-202ENST00000430771 AP5S1Q9NUS5 200 aa7.51□□□□□ -1.21
CHD4-202ENST00000430771 SACSQ9NZJ4 4579 aa7.5□□□□□ -1.21
CHD4-202ENST00000430771 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.5□□□□□ -1.21
CHD4-202ENST00000430771 IGKV2-29A2NJV5 120 aaPredicted RBP7.5□□□□□ -1.21
CHD4-202ENST00000430771 MPV17L2Q567V2 206 aa7.5□□□□□ -1.21
CHD4-202ENST00000430771 RNASEKQ6P5S7 137 aaKnown RBP7.5□□□□□ -1.21
CHD4-202ENST00000430771 C20orf203Q8NBC4 194 aa7.5□□□□□ -1.21
CHD4-202ENST00000430771 NBDYA0A0U1RRE5 68 aa7.49□□□□□ -1.21
CHD4-202ENST00000430771 LINC01546A6NGU7 62 aa7.49□□□□□ -1.21
CHD4-202ENST00000430771 LINC01549A6NIU2 74 aa7.49□□□□□ -1.21
CHD4-202ENST00000430771 C1orf196B1AJZ1 125 aa7.49□□□□□ -1.21
CHD4-202ENST00000430771 IGHV3-30P01768 117 aa7.49□□□□□ -1.21
CHD4-202ENST00000430771 IGHV3-33P01772 117 aa7.49□□□□□ -1.21
CHD4-202ENST00000430771 CRPP02741 224 aa7.49□□□□□ -1.21
CHD4-202ENST00000430771 IGHV3-30-3P0DP02 117 aa7.49□□□□□ -1.21
CHD4-202ENST00000430771 IGHV3-30-5P0DP03 117 aa7.49□□□□□ -1.21
CHD4-202ENST00000430771 FGF6P10767 208 aa7.49□□□□□ -1.21
CHD4-202ENST00000430771 BAGE3Q86Y29 109 aa7.49□□□□□ -1.21
CHD4-202ENST00000430771 TMEM101Q96IK0 257 aa7.49□□□□□ -1.21
CHD4-202ENST00000430771 CYSLTR1Q9Y271 337 aa7.49□□□□□ -1.21
CHD4-202ENST00000430771 A0A1B0GUV1 79 aa7.48□□□□□ -1.21
CHD4-202ENST00000430771 LINC00614P0C842 121 aa7.48□□□□□ -1.21
CHD4-202ENST00000430771 BTF3P20290 206 aaKnown RBP7.48□□□□□ -1.21
CHD4-202ENST00000430771 RBX1P62877 108 aa7.48□□□□□ -1.21
CHD4-202ENST00000430771 Q0VG73 95 aa7.48□□□□□ -1.21
CHD4-202ENST00000430771 MRPL52Q86TS9 123 aaKnown RBP7.48□□□□□ -1.21
CHD4-202ENST00000430771 OR5A1Q8NGJ0 315 aa7.48□□□□□ -1.21
CHD4-202ENST00000430771 CHCHD1Q96BP2 118 aaKnown RBP7.48□□□□□ -1.21
CHD4-202ENST00000430771 SPANXA1Q9NS26 97 aa7.48□□□□□ -1.21
CHD4-202ENST00000430771 KMT2CQ8NEZ4 4911 aaKnown RBP7.47□□□□□ -1.21
CHD4-202ENST00000430771 ANGP03950 147 aaKnown RBP7.47□□□□□ -1.21
CHD4-202ENST00000430771 DGAT2L7PQ6IED9 249 aa7.47□□□□□ -1.21
CHD4-202ENST00000430771 C2orf66Q6UXQ4 117 aa7.47□□□□□ -1.21
CHD4-202ENST00000430771 Q8N3U1 123 aa7.47□□□□□ -1.21
CHD4-202ENST00000430771 TIMM21Q9BVV7 248 aa7.47□□□□□ -1.21
CHD4-202ENST00000430771 UBE2D4Q9Y2X8 147 aa7.47□□□□□ -1.21
CHD4-202ENST00000430771 HIST1H2BKO60814 126 aa7.46□□□□□ -1.22
CHD4-202ENST00000430771 HSBP1O75506 76 aa7.46□□□□□ -1.22
CHD4-202ENST00000430771 HBDP02042 147 aa7.46□□□□□ -1.22
CHD4-202ENST00000430771 HIST1H2BJP06899 126 aa7.46□□□□□ -1.22
CHD4-202ENST00000430771 HIST1H2BOP23527 126 aa7.46□□□□□ -1.22
CHD4-202ENST00000430771 HIST1H2BBP33778 126 aa7.46□□□□□ -1.22
CHD4-202ENST00000430771 HIST1H2BDP58876 126 aa7.46□□□□□ -1.22
CHD4-202ENST00000430771 HIST1H2BCP62807 126 aa7.46□□□□□ -1.22
CHD4-202ENST00000430771 RPL39P62891 51 aaKnown RBP7.46□□□□□ -1.22
CHD4-202ENST00000430771 HIST2H2BEQ16778 126 aa7.46□□□□□ -1.22
CHD4-202ENST00000430771 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.46□□□□□ -1.22
CHD4-202ENST00000430771 Q8N976 141 aa7.46□□□□□ -1.22
CHD4-202ENST00000430771 HIST1H2BHQ93079 126 aa7.46□□□□□ -1.22
CHD4-202ENST00000430771 HIST1H2BNQ99877 126 aa7.46□□□□□ -1.22
CHD4-202ENST00000430771 HIST1H2BMQ99879 126 aa7.46□□□□□ -1.22
CHD4-202ENST00000430771 KLK12Q9UKR0 248 aa7.46□□□□□ -1.22
CHD4-202ENST00000430771 CSDC2Q9Y534 153 aaKnown RBP7.46□□□□□ -1.22
CHD4-202ENST00000430771 TOMM6Q96B49 74 aa7.45□□□□□ -1.22
CHD4-202ENST00000430771 RMI2Q96E14 147 aa7.45□□□□□ -1.22
CHD4-202ENST00000430771 URB1-AS1Q96HZ7 61 aa7.45□□□□□ -1.22
CHD4-202ENST00000430771 IGLV4-60A0A075B6I1 120 aa7.44□□□□□ -1.22
CHD4-202ENST00000430771 TRAV8-3A0A0A6YYJ7 113 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms