RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 GATD1Q8NB37 220 aa11.53□□□□□ -0.56
NUP50-208ENST00000430547 DEFB104AQ8WTQ1 72 aa11.53□□□□□ -0.56
NUP50-208ENST00000430547 USP17L23D6RBM5 183 aa11.52□□□□□ -0.57
NUP50-208ENST00000430547 INAFM2P0DMQ5 153 aa11.52□□□□□ -0.57
NUP50-208ENST00000430547 LINC01620Q4KN68 170 aa11.52□□□□□ -0.57
NUP50-208ENST00000430547 A0A1B0GUV1 79 aa11.51□□□□□ -0.57
NUP50-208ENST00000430547 SRP19P09132 144 aaKnown RBP11.51□□□□□ -0.57
NUP50-208ENST00000430547 Q6ZSA8 131 aa11.51□□□□□ -0.57
NUP50-208ENST00000430547 IGLV10-54A0A075B6I4 117 aa11.5□□□□□ -0.57
NUP50-208ENST00000430547 HIGD1CA8MV81 97 aa11.5□□□□□ -0.57
NUP50-208ENST00000430547 FOXA3P55318 350 aaPredicted RBP11.5□□□□□ -0.57
NUP50-208ENST00000430547 C20orf203Q8NBC4 194 aa11.5□□□□□ -0.57
NUP50-208ENST00000430547 TSKUQ8WUA8 353 aa11.5□□□□□ -0.57
NUP50-208ENST00000430547 RPL39LQ96EH5 51 aaKnown RBP11.5□□□□□ -0.57
NUP50-208ENST00000430547 GFRA4Q9GZZ7 299 aa11.5□□□□□ -0.57
NUP50-208ENST00000430547 OSTCQ9NRP0 149 aa11.5□□□□□ -0.57
NUP50-208ENST00000430547 TRAV8-4A0A0B4J246 113 aa11.49□□□□□ -0.57
NUP50-208ENST00000430547 A0A1B0GUT8 65 aa11.49□□□□□ -0.57
NUP50-208ENST00000430547 IGLV4-60A0A075B6I1 120 aa11.48□□□□□ -0.57
NUP50-208ENST00000430547 FAM231BA6NCW3 169 aa11.48□□□□□ -0.57
NUP50-208ENST00000430547 FAM74A3Q4VXF1 159 aa11.48□□□□□ -0.57
NUP50-208ENST00000430547 AMMECR1LQ6DCA0 310 aa11.48□□□□□ -0.57
NUP50-208ENST00000430547 SDHAF1A6NFY7 115 aa11.47□□□□□ -0.57
NUP50-208ENST00000430547 NCR2O95944 276 aa11.47□□□□□ -0.57
NUP50-208ENST00000430547 APCSP02743 223 aa11.47□□□□□ -0.57
NUP50-208ENST00000430547 TMEM241Q24JQ0 296 aa11.47□□□□□ -0.57
NUP50-208ENST00000430547 PLA2G1BP04054 148 aaKnown RBP11.45□□□□□ -0.58
NUP50-208ENST00000430547 PRSS1P07477 247 aa11.45□□□□□ -0.58
NUP50-208ENST00000430547 PMCHP20382 165 aa11.45□□□□□ -0.58
NUP50-208ENST00000430547 PEA15Q15121 130 aa11.45□□□□□ -0.58
NUP50-208ENST00000430547 ADIRFQ15847 76 aa11.45□□□□□ -0.58
NUP50-208ENST00000430547 KRTAP26-1Q6PEX3 210 aa11.45□□□□□ -0.58
NUP50-208ENST00000430547 TMEM191AQ9H0A3 160 aa11.45□□□□□ -0.58
NUP50-208ENST00000430547 FAT1Q14517 4588 aa11.45□□□□□ -0.58
NUP50-208ENST00000430547 SRRM2Q9UQ35 2752 aaKnown RBP11.44□□□□□ -0.58
NUP50-208ENST00000430547 I3L3M4 83 aa11.44□□□□□ -0.58
NUP50-208ENST00000430547 RIGQ13278 110 aa11.44□□□□□ -0.58
NUP50-208ENST00000430547 DGAT2L7PQ6IED9 249 aa11.44□□□□□ -0.58
NUP50-208ENST00000430547 RNASEKQ6P5S7 137 aaKnown RBP11.44□□□□□ -0.58
NUP50-208ENST00000430547 SCXQ7RTU7 201 aa11.44□□□□□ -0.58
NUP50-208ENST00000430547 LINC00528Q8N1L1 170 aa11.44□□□□□ -0.58
NUP50-208ENST00000430547 CLRN3Q8NCR9 226 aa11.44□□□□□ -0.58
NUP50-208ENST00000430547 ISOC2Q96AB3 205 aa11.44□□□□□ -0.58
NUP50-208ENST00000430547 ST20Q9HBF5 79 aa11.44□□□□□ -0.58
NUP50-208ENST00000430547 NAT8Q9UHE5 227 aa11.44□□□□□ -0.58
NUP50-208ENST00000430547 V9GYV3 84 aa11.44□□□□□ -0.58
NUP50-208ENST00000430547 VPS13BQ7Z7G8 4022 aa11.43□□□□□ -0.58
NUP50-208ENST00000430547 IGKV3OR2-268A0A0C4DH90 116 aa11.43□□□□□ -0.58
NUP50-208ENST00000430547 TRBV6-5A0A0K0K1A5 114 aa11.43□□□□□ -0.58
NUP50-208ENST00000430547 H7C423 109 aa11.43□□□□□ -0.58
NUP50-208ENST00000430547 RPL23P62829 140 aaKnown RBP11.43□□□□□ -0.58
NUP50-208ENST00000430547 CHAC1Q9BUX1 264 aa11.43□□□□□ -0.58
NUP50-208ENST00000430547 DNAH8Q96JB1 4490 aa11.42□□□□□ -0.58
NUP50-208ENST00000430547 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.42□□□□□ -0.58
NUP50-208ENST00000430547 hDV102S1A0JD36 115 aa11.42□□□□□ -0.58
NUP50-208ENST00000430547 IGKV2-29A2NJV5 120 aaPredicted RBP11.42□□□□□ -0.58
NUP50-208ENST00000430547 MRAP2Q96G30 205 aa11.42□□□□□ -0.58
NUP50-208ENST00000430547 NAT8BQ9UHF3 227 aa11.42□□□□□ -0.58
NUP50-208ENST00000430547 FGF6P10767 208 aa11.41□□□□□ -0.58
NUP50-208ENST00000430547 AMN1Q8IY45 258 aa11.41□□□□□ -0.58
NUP50-208ENST00000430547 NUP35Q8NFH5 326 aa11.41□□□□□ -0.58
NUP50-208ENST00000430547 BTF3L4Q96K17 158 aa11.41□□□□□ -0.58
NUP50-208ENST00000430547 SMDT1Q9H4I9 107 aa11.41□□□□□ -0.58
NUP50-208ENST00000430547 AP5S1Q9NUS5 200 aa11.41□□□□□ -0.58
NUP50-208ENST00000430547 ZNF25P17030 456 aaPredicted RBP11.4□□□□□ -0.58
NUP50-208ENST00000430547 RAB4AP20338 218 aa11.4□□□□□ -0.58
NUP50-208ENST00000430547 TMEM101Q96IK0 257 aa11.4□□□□□ -0.58
NUP50-208ENST00000430547 C9JQL5 133 aa11.39□□□□□ -0.59
NUP50-208ENST00000430547 SRSF3P84103 164 aaKnown RBP11.39□□□□□ -0.59
NUP50-208ENST00000430547 C9orf163Q8N9P6 203 aa11.39□□□□□ -0.59
NUP50-208ENST00000430547 CIRBP-AS1Q8TBR5 109 aa11.39□□□□□ -0.59
NUP50-208ENST00000430547 RNF185Q96GF1 192 aa11.39□□□□□ -0.59
NUP50-208ENST00000430547 TMEM242Q9NWH2 141 aa11.39□□□□□ -0.59
NUP50-208ENST00000430547 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.38□□□□□ -0.59
NUP50-208ENST00000430547 GAGE12HA6NDE8 117 aa11.38□□□□□ -0.59
NUP50-208ENST00000430547 GAS8-AS1O95177 125 aa11.38□□□□□ -0.59
NUP50-208ENST00000430547 PPP1R17O96001 155 aa11.38□□□□□ -0.59
NUP50-208ENST00000430547 TSHBP01222 138 aa11.37□□□□□ -0.59
NUP50-208ENST00000430547 RPS10P46783 165 aaKnown RBP11.37□□□□□ -0.59
NUP50-208ENST00000430547 CFAP161Q6P656 301 aa11.37□□□□□ -0.59
NUP50-208ENST00000430547 TRBV27A0A0K0K1C4 114 aa11.36□□□□□ -0.59
NUP50-208ENST00000430547 SMIM27A0A1W2PRY6 76 aa11.36□□□□□ -0.59
NUP50-208ENST00000430547 SMKR1H3BMG3 65 aa11.36□□□□□ -0.59
NUP50-208ENST00000430547 FCER1GP30273 86 aa11.36□□□□□ -0.59
NUP50-208ENST00000430547 CNBPP62633 177 aaKnown RBP11.36□□□□□ -0.59
NUP50-208ENST00000430547 OR5A1Q8NGJ0 315 aa11.36□□□□□ -0.59
NUP50-208ENST00000430547 CHCHD10Q8WYQ3 142 aaPredicted RBP11.36□□□□□ -0.59
NUP50-208ENST00000430547 FLG2Q5D862 2391 aaPredicted RBP11.36□□□□□ -0.59
NUP50-208ENST00000430547 A0A1B0GW15 77 aa11.35□□□□□ -0.59
NUP50-208ENST00000430547 CAMPP49913 170 aa11.35□□□□□ -0.59
NUP50-208ENST00000430547 POLR2KP53803 58 aaKnown RBP11.35□□□□□ -0.59
NUP50-208ENST00000430547 DMBT1Q9UGM3 2413 aaPredicted RBP11.34□□□□□ -0.59
NUP50-208ENST00000430547 C7orf77A4D0Y5 90 aa11.34□□□□□ -0.59
NUP50-208ENST00000430547 VCYO14598 125 aa11.34□□□□□ -0.59
NUP50-208ENST00000430547 ESDP10768 282 aa11.34□□□□□ -0.59
NUP50-208ENST00000430547 KIR2DL4Q99706 377 aa11.34□□□□□ -0.59
NUP50-208ENST00000430547 IGHV3-64A0A075B6Q5 118 aa11.33□□□□□ -0.6
NUP50-208ENST00000430547 PPP1R2P9O14990 202 aa11.33□□□□□ -0.6
NUP50-208ENST00000430547 S100A8P05109 93 aa11.33□□□□□ -0.6
NUP50-208ENST00000430547 SUMO2P61956 95 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms