RNA–Protein interactions for RNA: ENST00000429374.5

HDAC10-204, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best)

Gene HDAC10, Length 1,634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-204ENST00000429374 HNRNPA3P51991 378 aaKnown RBP13.53□□□□□ -0.24
HDAC10-204ENST00000429374 PRSS29PA6NIE9 313 aa13.53□□□□□ -0.24
HDAC10-204ENST00000429374 A8MZ25 164 aa13.53□□□□□ -0.24
HDAC10-204ENST00000429374 M0R143 59 aa13.53□□□□□ -0.24
HDAC10-204ENST00000429374 DLEU1O43261 78 aa13.53□□□□□ -0.24
HDAC10-204ENST00000429374 COTL1Q14019 142 aa13.53□□□□□ -0.24
HDAC10-204ENST00000429374 DAZ4Q86SG3 579 aaKnown RBP13.53□□□□□ -0.24
HDAC10-204ENST00000429374 DAZ3Q9NR90 486 aaKnown RBP13.53□□□□□ -0.24
HDAC10-204ENST00000429374 ANKRD39Q53RE8 183 aa13.52□□□□□ -0.25
HDAC10-204ENST00000429374 SLC25A29Q8N8R3 303 aa13.52□□□□□ -0.25
HDAC10-204ENST00000429374 Q9UF83 564 aa13.52□□□□□ -0.25
HDAC10-204ENST00000429374 LYRM9A8MSI8 78 aa13.51□□□□□ -0.25
HDAC10-204ENST00000429374 STPG4Q8N801 248 aa13.51□□□□□ -0.25
HDAC10-204ENST00000429374 IGHV4-30-4P0DP06 118 aa13.5□□□□□ -0.25
HDAC10-204ENST00000429374 ZNRF2Q8NHG8 242 aa13.5□□□□□ -0.25
HDAC10-204ENST00000429374 CST9LQ9H4G1 147 aa13.5□□□□□ -0.25
HDAC10-204ENST00000429374 NOTCH3Q9UM47 2321 aa13.5□□□□□ -0.25
HDAC10-204ENST00000429374 UBE2D3P61077 147 aa13.5□□□□□ -0.25
HDAC10-204ENST00000429374 UBE2D2P62837 147 aa13.5□□□□□ -0.25
HDAC10-204ENST00000429374 CTAG1AP78358 180 aa13.5□□□□□ -0.25
HDAC10-204ENST00000429374 CHCHD7Q9BUK0 85 aa13.5□□□□□ -0.25
HDAC10-204ENST00000429374 MIFP14174 115 aa13.49□□□□□ -0.25
HDAC10-204ENST00000429374 ZC2HC1BQ5TFG8 222 aa13.49□□□□□ -0.25
HDAC10-204ENST00000429374 BOD1L2Q8IYS8 172 aa13.49□□□□□ -0.25
HDAC10-204ENST00000429374 SPANXA1Q9NS26 97 aa13.49□□□□□ -0.25
HDAC10-204ENST00000429374 TRGV4A0A0C4DH28 118 aa13.48□□□□□ -0.25
HDAC10-204ENST00000429374 SIVA1O15304 175 aa13.48□□□□□ -0.25
HDAC10-204ENST00000429374 FHL2Q14192 279 aa13.48□□□□□ -0.25
HDAC10-204ENST00000429374 RNF183Q96D59 192 aa13.48□□□□□ -0.25
HDAC10-204ENST00000429374 TIMM21Q9BVV7 248 aa13.48□□□□□ -0.25
HDAC10-204ENST00000429374 SNHG12Q9BXW3 62 aa13.48□□□□□ -0.25
HDAC10-204ENST00000429374 FGF6P10767 208 aa13.47□□□□□ -0.25
HDAC10-204ENST00000429374 OXLD1Q5BKU9 147 aa13.47□□□□□ -0.25
HDAC10-204ENST00000429374 OR11H2Q8NH07 326 aa13.47□□□□□ -0.25
HDAC10-204ENST00000429374 C2orf88Q9BSF0 95 aa13.47□□□□□ -0.25
HDAC10-204ENST00000429374 GTSF1LQ9H1H1 148 aa13.47□□□□□ -0.25
HDAC10-204ENST00000429374 DEFB135Q30KP9 77 aa13.46□□□□□ -0.25
HDAC10-204ENST00000429374 DEFB104AQ8WTQ1 72 aa13.46□□□□□ -0.25
HDAC10-204ENST00000429374 PRADC1Q9BSG0 188 aa13.46□□□□□ -0.25
HDAC10-204ENST00000429374 FBN1P35555 2871 aaKnown RBP13.46□□□□□ -0.25
HDAC10-204ENST00000429374 IGLV4-3A0A075B6K6 122 aa13.46□□□□□ -0.26
HDAC10-204ENST00000429374 SMAGPQ0VAQ4 97 aa13.46□□□□□ -0.26
HDAC10-204ENST00000429374 EMP1P54849 157 aa13.45□□□□□ -0.26
HDAC10-204ENST00000429374 NFE4Q86UQ8 179 aa13.45□□□□□ -0.26
HDAC10-204ENST00000429374 PHLDA1Q8WV24 401 aaPredicted RBP13.45□□□□□ -0.26
HDAC10-204ENST00000429374 AMELXQ99217 191 aa13.45□□□□□ -0.26
HDAC10-204ENST00000429374 VCX2Q9H322 139 aa13.45□□□□□ -0.26
HDAC10-204ENST00000429374 IGLV4-69A0A075B6H9 119 aa13.44□□□□□ -0.26
HDAC10-204ENST00000429374 KRTAP10-11P60412 298 aa13.44□□□□□ -0.26
HDAC10-204ENST00000429374 UBE2D4Q9Y2X8 147 aa13.44□□□□□ -0.26
HDAC10-204ENST00000429374 TRRAPQ9Y4A5 3859 aa13.43□□□□□ -0.26
HDAC10-204ENST00000429374 MRPS36P82909 103 aaKnown RBP13.43□□□□□ -0.26
HDAC10-204ENST00000429374 TMEM97Q5BJF2 176 aa13.42□□□□□ -0.26
HDAC10-204ENST00000429374 Q8NAQ8 132 aa13.42□□□□□ -0.26
HDAC10-204ENST00000429374 CSDC2Q9Y534 153 aaKnown RBP13.42□□□□□ -0.26
HDAC10-204ENST00000429374 IGHV3-38A0A0C4DH36 116 aa13.42□□□□□ -0.26
HDAC10-204ENST00000429374 GAGE12JA6NER3 117 aa13.42□□□□□ -0.26
HDAC10-204ENST00000429374 H7C423 109 aa13.42□□□□□ -0.26
HDAC10-204ENST00000429374 EREGO14944 169 aa13.42□□□□□ -0.26
HDAC10-204ENST00000429374 LINC00694P0DN24 101 aa13.42□□□□□ -0.26
HDAC10-204ENST00000429374 NMUP48645 174 aa13.42□□□□□ -0.26
HDAC10-204ENST00000429374 GAGE1Q13065 139 aa13.42□□□□□ -0.26
HDAC10-204ENST00000429374 GAGE4Q13068 117 aa13.42□□□□□ -0.26
HDAC10-204ENST00000429374 GAGE5Q13069 117 aa13.42□□□□□ -0.26
HDAC10-204ENST00000429374 GAGE13Q4V321 117 aa13.42□□□□□ -0.26
HDAC10-204ENST00000429374 FAM222AQ5U5X8 452 aa13.42□□□□□ -0.26
HDAC10-204ENST00000429374 IGHV4-28A0A0C4DH34 117 aa13.41□□□□□ -0.26
HDAC10-204ENST00000429374 C11orf86A6NJI1 115 aa13.41□□□□□ -0.26
HDAC10-204ENST00000429374 E9PLD3 99 aa13.41□□□□□ -0.26
HDAC10-204ENST00000429374 DEFB130BP0DP73 79 aa13.41□□□□□ -0.26
HDAC10-204ENST00000429374 DEFB130AP0DP74 79 aa13.41□□□□□ -0.26
HDAC10-204ENST00000429374 FAM104AQ969W3 186 aa13.41□□□□□ -0.26
HDAC10-204ENST00000429374 IGKV2D-26A0A0A0MRZ7 120 aa13.4□□□□□ -0.26
HDAC10-204ENST00000429374 PRO0255Q9UI72 69 aa13.4□□□□□ -0.26
HDAC10-204ENST00000429374 TEX48A0A1B0GUV7 120 aa13.39□□□□□ -0.27
HDAC10-204ENST00000429374 HERVK_113P61574 105 aa13.39□□□□□ -0.27
HDAC10-204ENST00000429374 NTM-AS1Q6ZSK4 140 aa13.39□□□□□ -0.27
HDAC10-204ENST00000429374 C2orf91Q6ZV80 131 aa13.39□□□□□ -0.27
HDAC10-204ENST00000429374 SBSPONQ8IVN8 264 aa13.39□□□□□ -0.27
HDAC10-204ENST00000429374 HIGD1BQ9P298 99 aa13.39□□□□□ -0.27
HDAC10-204ENST00000429374 PCP2Q8IVA1 136 aa13.39□□□□□ -0.27
HDAC10-204ENST00000429374 OPRPNQ99935 248 aaPredicted RBP13.39□□□□□ -0.27
HDAC10-204ENST00000429374 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.38□□□□□ -0.27
HDAC10-204ENST00000429374 IGKV2-29A2NJV5 120 aaPredicted RBP13.38□□□□□ -0.27
HDAC10-204ENST00000429374 SPART-AS1P0CW21 52 aa13.37□□□□□ -0.27
HDAC10-204ENST00000429374 SAMD5Q5TGI4 173 aa13.36□□□□□ -0.27
HDAC10-204ENST00000429374 TRBV25-1A0A075B6N4 114 aa13.35□□□□□ -0.27
HDAC10-204ENST00000429374 DAD1P61803 113 aa13.35□□□□□ -0.27
HDAC10-204ENST00000429374 COL5A1-AS1Q5SY13 56 aa13.35□□□□□ -0.27
HDAC10-204ENST00000429374 TMEM243Q9BU79 118 aa13.35□□□□□ -0.27
HDAC10-204ENST00000429374 LOC100131303A0A0U1RQF7 123 aa13.35□□□□□ -0.27
HDAC10-204ENST00000429374 DGAT2L7PQ6IED9 249 aa13.35□□□□□ -0.27
HDAC10-204ENST00000429374 CHAC1Q9BUX1 264 aa13.35□□□□□ -0.27
HDAC10-204ENST00000429374 TP73-AS1Q9UF72 201 aa13.35□□□□□ -0.27
HDAC10-204ENST00000429374 CMYA5Q8N3K9 4069 aa13.34□□□□□ -0.27
HDAC10-204ENST00000429374 TINCRA0A1B0GVN0 87 aa13.34□□□□□ -0.27
HDAC10-204ENST00000429374 ATP5G1P05496 136 aa13.33□□□□□ -0.28
HDAC10-204ENST00000429374 ZNF25P17030 456 aaPredicted RBP13.33□□□□□ -0.28
HDAC10-204ENST00000429374 HINT1P49773 126 aaPredicted RBP13.33□□□□□ -0.28
HDAC10-204ENST00000429374 MPV17L2Q567V2 206 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms