RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 CAMPP49913 170 aa6.9□□□□□ -1.3
DDX39B-208ENST00000428098 CNPY1Q3B7I2 92 aa6.9□□□□□ -1.3
DDX39B-208ENST00000428098 SUMO4Q6EEV6 95 aa6.9□□□□□ -1.3
DDX39B-208ENST00000428098 ZFP30Q9Y2G7 519 aa6.9□□□□□ -1.3
DDX39B-208ENST00000428098 HSPB11Q9Y547 144 aa6.9□□□□□ -1.3
DDX39B-208ENST00000428098 LOC100996750A0A140TA64 210 aa6.89□□□□□ -1.31
DDX39B-208ENST00000428098 CENPXA8MT69 81 aa6.89□□□□□ -1.31
DDX39B-208ENST00000428098 PEX7O00628 323 aa6.89□□□□□ -1.31
DDX39B-208ENST00000428098 CCL25O15444 150 aa6.89□□□□□ -1.31
DDX39B-208ENST00000428098 APOMO95445 188 aa6.89□□□□□ -1.31
DDX39B-208ENST00000428098 SPANXN1Q5VSR9 72 aa6.89□□□□□ -1.31
DDX39B-208ENST00000428098 TRIQKQ629K1 86 aa6.89□□□□□ -1.31
DDX39B-208ENST00000428098 KRTAP7-1Q8IUC3 87 aa6.89□□□□□ -1.31
DDX39B-208ENST00000428098 PGLYRP4Q96LB8 373 aa6.89□□□□□ -1.31
DDX39B-208ENST00000428098 OPRPNQ99935 248 aaPredicted RBP6.89□□□□□ -1.31
DDX39B-208ENST00000428098 KRTAP4-6Q9BYQ5 205 aa6.89□□□□□ -1.31
DDX39B-208ENST00000428098 LINC00959A0A1B0GUT2 108 aa6.88□□□□□ -1.31
DDX39B-208ENST00000428098 A0A1W2PRE2 83 aa6.88□□□□□ -1.31
DDX39B-208ENST00000428098 OR5A1Q8NGJ0 315 aa6.88□□□□□ -1.31
DDX39B-208ENST00000428098 SSPOA2VEC9 5147 aa6.87□□□□□ -1.31
DDX39B-208ENST00000428098 S100A5P33763 92 aa6.87□□□□□ -1.31
DDX39B-208ENST00000428098 RPL18AQ02543 176 aaKnown RBP6.87□□□□□ -1.31
DDX39B-208ENST00000428098 MED28Q9H204 178 aa6.87□□□□□ -1.31
DDX39B-208ENST00000428098 TMEM167BQ9NRX6 74 aa6.87□□□□□ -1.31
DDX39B-208ENST00000428098 MGPP08493 103 aa6.86□□□□□ -1.31
DDX39B-208ENST00000428098 OR5AL1P0C617 328 aa6.86□□□□□ -1.31
DDX39B-208ENST00000428098 SMIM17P0DL12 118 aa6.86□□□□□ -1.31
DDX39B-208ENST00000428098 LORP23490 312 aaPredicted RBP6.86□□□□□ -1.31
DDX39B-208ENST00000428098 UBE2G2P60604 165 aa6.86□□□□□ -1.31
DDX39B-208ENST00000428098 COTL1Q14019 142 aa6.86□□□□□ -1.31
DDX39B-208ENST00000428098 ASB16-AS1Q495Z4 193 aa6.86□□□□□ -1.31
DDX39B-208ENST00000428098 RNASEKQ6P5S7 137 aaKnown RBP6.86□□□□□ -1.31
DDX39B-208ENST00000428098 RASL11AQ6T310 242 aa6.86□□□□□ -1.31
DDX39B-208ENST00000428098 TYMSOSQ8TAI1 123 aa6.86□□□□□ -1.31
DDX39B-208ENST00000428098 NUDT15Q9NV35 164 aa6.86□□□□□ -1.31
DDX39B-208ENST00000428098 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.85□□□□□ -1.31
DDX39B-208ENST00000428098 IGKV2-29A2NJV5 120 aaPredicted RBP6.85□□□□□ -1.31
DDX39B-208ENST00000428098 CXorf1O96002 111 aa6.85□□□□□ -1.31
DDX39B-208ENST00000428098 MT1HP80294 61 aa6.85□□□□□ -1.31
DDX39B-208ENST00000428098 KRTAP19-2Q3LHN2 52 aa6.85□□□□□ -1.31
DDX39B-208ENST00000428098 AMMECR1LQ6DCA0 310 aa6.85□□□□□ -1.31
DDX39B-208ENST00000428098 ISOC2Q96AB3 205 aa6.85□□□□□ -1.31
DDX39B-208ENST00000428098 NIT2Q9NQR4 276 aa6.85□□□□□ -1.31
DDX39B-208ENST00000428098 LTAP01374 205 aa6.84□□□□□ -1.31
DDX39B-208ENST00000428098 CXCL1P09341 107 aa6.84□□□□□ -1.31
DDX39B-208ENST00000428098 IL7P13232 177 aa6.84□□□□□ -1.31
DDX39B-208ENST00000428098 HIST1H2BAQ96A08 127 aa6.84□□□□□ -1.31
DDX39B-208ENST00000428098 AP1S3Q96PC3 154 aa6.84□□□□□ -1.31
DDX39B-208ENST00000428098 CAMK2N2Q96S95 79 aa6.84□□□□□ -1.31
DDX39B-208ENST00000428098 PPDPFQ9H3Y8 114 aa6.84□□□□□ -1.31
DDX39B-208ENST00000428098 FAM74A7A6NL05 159 aa6.83□□□□□ -1.32
DDX39B-208ENST00000428098 ZNF861PO60384 105 aa6.83□□□□□ -1.32
DDX39B-208ENST00000428098 H2AFB2P0C5Z0 115 aa6.83□□□□□ -1.32
DDX39B-208ENST00000428098 NTF3P20783 257 aa6.83□□□□□ -1.32
DDX39B-208ENST00000428098 KRTAP13-2Q52LG2 175 aa6.83□□□□□ -1.32
DDX39B-208ENST00000428098 EIF5AL1Q6IS14 154 aaKnown RBP6.83□□□□□ -1.32
DDX39B-208ENST00000428098 CD164L2Q6UWJ8 174 aa6.83□□□□□ -1.32
DDX39B-208ENST00000428098 Q6ZNX1 250 aa6.83□□□□□ -1.32
DDX39B-208ENST00000428098 LINC00173Q6ZV60 143 aa6.83□□□□□ -1.32
DDX39B-208ENST00000428098 FAM19A5Q7Z5A7 132 aaPredicted RBP6.83□□□□□ -1.32
DDX39B-208ENST00000428098 TSKUQ8WUA8 353 aa6.83□□□□□ -1.32
DDX39B-208ENST00000428098 ANAPC11Q9NYG5 84 aa6.83□□□□□ -1.32
DDX39B-208ENST00000428098 LYRM1O43325 122 aa6.82□□□□□ -1.32
DDX39B-208ENST00000428098 BCL2L11O43521 198 aa6.82□□□□□ -1.32
DDX39B-208ENST00000428098 ATP6V0CP27449 155 aa6.82□□□□□ -1.32
DDX39B-208ENST00000428098 FMC1Q96HJ9 113 aa6.82□□□□□ -1.32
DDX39B-208ENST00000428098 USH2AO75445 5202 aa6.81□□□□□ -1.32
DDX39B-208ENST00000428098 KRTAP10-6P60371 365 aaPredicted RBP6.81□□□□□ -1.32
DDX39B-208ENST00000428098 RNF151Q2KHN1 245 aa6.81□□□□□ -1.32
DDX39B-208ENST00000428098 PPP1R1CQ8WVI7 109 aa6.81□□□□□ -1.32
DDX39B-208ENST00000428098 C2orf48Q96LS8 159 aa6.81□□□□□ -1.32
DDX39B-208ENST00000428098 H2BFSP57053 126 aa6.8□□□□□ -1.32
DDX39B-208ENST00000428098 UBE2G1P62253 170 aa6.8□□□□□ -1.32
DDX39B-208ENST00000428098 ZNF726P1Q15940 193 aa6.8□□□□□ -1.32
DDX39B-208ENST00000428098 H7C423 109 aa6.79□□□□□ -1.32
DDX39B-208ENST00000428098 MPC2O95563 127 aa6.79□□□□□ -1.32
DDX39B-208ENST00000428098 TSHBP01222 138 aa6.79□□□□□ -1.32
DDX39B-208ENST00000428098 ESDP10768 282 aa6.79□□□□□ -1.32
DDX39B-208ENST00000428098 UBE2BP63146 152 aa6.79□□□□□ -1.32
DDX39B-208ENST00000428098 SS18Q15532 418 aa6.79□□□□□ -1.32
DDX39B-208ENST00000428098 ACTR3CQ9C0K3 210 aaPredicted RBP6.79□□□□□ -1.32
DDX39B-208ENST00000428098 C19orf71A6NCJ1 209 aa6.78□□□□□ -1.32
DDX39B-208ENST00000428098 CFC1BP0CG36 223 aa6.78□□□□□ -1.32
DDX39B-208ENST00000428098 M0QXV9 152 aa6.77□□□□□ -1.33
DDX39B-208ENST00000428098 C10orf25Q5T742 122 aa6.77□□□□□ -1.33
DDX39B-208ENST00000428098 LINC00304Q8N9R0 145 aa6.77□□□□□ -1.33
DDX39B-208ENST00000428098 PSMG3Q9BT73 122 aaPredicted RBP6.77□□□□□ -1.33
DDX39B-208ENST00000428098 NKX6-2Q9C056 277 aaPredicted RBP6.77□□□□□ -1.33
DDX39B-208ENST00000428098 COX7A2LO14548 114 aa6.76□□□□□ -1.33
DDX39B-208ENST00000428098 NOL3O60936 208 aaKnown RBP6.76□□□□□ -1.33
DDX39B-208ENST00000428098 IGLC6P0CF74 106 aa6.76□□□□□ -1.33
DDX39B-208ENST00000428098 ZNF25P17030 456 aaPredicted RBP6.76□□□□□ -1.33
DDX39B-208ENST00000428098 MALP21145 153 aa6.76□□□□□ -1.33
DDX39B-208ENST00000428098 KRTAP13-3Q3SY46 172 aa6.76□□□□□ -1.33
DDX39B-208ENST00000428098 GAGE2EQ4V326 116 aa6.76□□□□□ -1.33
DDX39B-208ENST00000428098 GATD1Q8NB37 220 aa6.76□□□□□ -1.33
DDX39B-208ENST00000428098 TPPP3Q9BW30 176 aa6.76□□□□□ -1.33
DDX39B-208ENST00000428098 CDC42SE2Q9NRR3 84 aa6.76□□□□□ -1.33
DDX39B-208ENST00000428098 GAGE2DQ9UEU5 116 aa6.76□□□□□ -1.33
DDX39B-208ENST00000428098 TNFSF18Q9UNG2 199 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms