RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 DEFB114Q30KQ6 69 aa4.35□□□□□ -1.71
HERC4-206ENST00000427635 C12orf74Q32Q52 190 aa4.35□□□□□ -1.71
HERC4-206ENST00000427635 C18orf32Q8TCD1 76 aa4.35□□□□□ -1.71
HERC4-206ENST00000427635 ZSWIM8A7E2V4 1837 aa4.35□□□□□ -1.71
HERC4-206ENST00000427635 WI2-2373I1.2A0A1W2PRP0 233 aa4.35□□□□□ -1.71
HERC4-206ENST00000427635 LY6LH3BQJ8 138 aa4.35□□□□□ -1.71
HERC4-206ENST00000427635 KPRPQ5T749 579 aaPredicted RBP4.35□□□□□ -1.71
HERC4-206ENST00000427635 Q6ZSV7 163 aa4.35□□□□□ -1.71
HERC4-206ENST00000427635 PLXND1Q9Y4D7 1925 aa4.35□□□□□ -1.71
HERC4-206ENST00000427635 LRRK2Q5S007 2527 aa4.35□□□□□ -1.71
HERC4-206ENST00000427635 MIR7-3HGQ8N6C7 128 aa4.35□□□□□ -1.71
HERC4-206ENST00000427635 A0A0J9YX75 114 aa4.34□□□□□ -1.71
HERC4-206ENST00000427635 TET1Q8NFU7 2136 aa4.34□□□□□ -1.71
HERC4-206ENST00000427635 HEATR1Q9H583 2144 aaKnown RBP4.34□□□□□ -1.71
HERC4-206ENST00000427635 IGLV4-69A0A075B6H9 119 aa4.34□□□□□ -1.71
HERC4-206ENST00000427635 ODF3BA8MYP8 253 aa4.34□□□□□ -1.71
HERC4-206ENST00000427635 COX8AP10176 69 aa4.34□□□□□ -1.71
HERC4-206ENST00000427635 BTCP35070 178 aa4.34□□□□□ -1.71
HERC4-206ENST00000427635 NANOS2P60321 138 aaKnown RBP4.34□□□□□ -1.71
HERC4-206ENST00000427635 Q6ZSR3 168 aa4.34□□□□□ -1.71
HERC4-206ENST00000427635 WFDC10BQ8IUB3 73 aa4.34□□□□□ -1.71
HERC4-206ENST00000427635 Q8N7P7 452 aa4.34□□□□□ -1.71
HERC4-206ENST00000427635 PLXNA3P51805 1871 aa4.34□□□□□ -1.71
HERC4-206ENST00000427635 K7EIM0 57 aa4.34□□□□□ -1.71
HERC4-206ENST00000427635 SPRNQ5BIV9 151 aa4.34□□□□□ -1.71
HERC4-206ENST00000427635 ODF3Q96PU9 254 aa4.34□□□□□ -1.71
HERC4-206ENST00000427635 MT-ATP8P03928 68 aa4.34□□□□□ -1.72
HERC4-206ENST00000427635 RITA1Q96K30 269 aa4.34□□□□□ -1.72
HERC4-206ENST00000427635 DHRS4-AS1Q9P1J3 65 aa4.34□□□□□ -1.72
HERC4-206ENST00000427635 CYYR1Q96J86 154 aa4.33□□□□□ -1.72
HERC4-206ENST00000427635 IGKV3D-7A0A0C4DH55 119 aa4.33□□□□□ -1.72
HERC4-206ENST00000427635 FAM229AH3BQW9 127 aa4.33□□□□□ -1.72
HERC4-206ENST00000427635 TAX1BP3O14907 124 aa4.33□□□□□ -1.72
HERC4-206ENST00000427635 V9GYV3 84 aa4.33□□□□□ -1.72
HERC4-206ENST00000427635 COL4A1P02462 1669 aa4.33□□□□□ -1.72
HERC4-206ENST00000427635 CIRBP-AS1Q8TBR5 109 aa4.33□□□□□ -1.72
HERC4-206ENST00000427635 TECTAO75443 2155 aa4.33□□□□□ -1.72
HERC4-206ENST00000427635 A0A0J9YXV3 536 aa4.33□□□□□ -1.72
HERC4-206ENST00000427635 IGLC2P0DOY2 106 aa4.33□□□□□ -1.72
HERC4-206ENST00000427635 IGLC3P0DOY3 106 aa4.33□□□□□ -1.72
HERC4-206ENST00000427635 CTRLP40313 264 aa4.33□□□□□ -1.72
HERC4-206ENST00000427635 NTN5Q8WTR8 489 aaPredicted RBP4.33□□□□□ -1.72
HERC4-206ENST00000427635 NLRC5Q86WI3 1866 aa4.33□□□□□ -1.72
HERC4-206ENST00000427635 Q6ZTI0 123 aa4.33□□□□□ -1.72
HERC4-206ENST00000427635 DKK2Q9UBU2 259 aa4.33□□□□□ -1.72
HERC4-206ENST00000427635 NUP210Q8TEM1 1887 aaPredicted RBP4.32□□□□□ -1.72
HERC4-206ENST00000427635 DOCK8Q8NF50 2099 aa4.32□□□□□ -1.72
HERC4-206ENST00000427635 CDSNQ15517 529 aa4.32□□□□□ -1.72
HERC4-206ENST00000427635 ETDBQ3ZM63 59 aa4.32□□□□□ -1.72
HERC4-206ENST00000427635 C10orf25Q5T742 122 aa4.32□□□□□ -1.72
HERC4-206ENST00000427635 TOMM6Q96B49 74 aa4.32□□□□□ -1.72
HERC4-206ENST00000427635 MSRB1Q9NZV6 116 aa4.32□□□□□ -1.72
HERC4-206ENST00000427635 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.32□□□□□ -1.721e-6■■■■□ 21.5
HERC4-206ENST00000427635 FOXI1Q12951 378 aa4.32□□□□□ -1.72
HERC4-206ENST00000427635 YPEL4Q96NS1 127 aa4.32□□□□□ -1.72
HERC4-206ENST00000427635 C19orf71A6NCJ1 209 aa4.32□□□□□ -1.72
HERC4-206ENST00000427635 ATOX1O00244 68 aa4.32□□□□□ -1.72
HERC4-206ENST00000427635 LELP1Q5T871 98 aa4.32□□□□□ -1.72
HERC4-206ENST00000427635 IGLV2-8P01709 118 aa4.32□□□□□ -1.72
HERC4-206ENST00000427635 DAND5Q8N907 189 aa4.32□□□□□ -1.72
HERC4-206ENST00000427635 C11orf53Q8IXP5 236 aa4.31□□□□□ -1.72
HERC4-206ENST00000427635 MDFICQ9P1T7 246 aa4.31□□□□□ -1.72
HERC4-206ENST00000427635 FER1L5A0AVI2 2057 aa4.31□□□□□ -1.72
HERC4-206ENST00000427635 GREB1LQ9C091 1923 aaPredicted RBP4.31□□□□□ -1.72
HERC4-206ENST00000427635 Q6Q795 121 aa4.31□□□□□ -1.72
HERC4-206ENST00000427635 SPTBN4Q9H254 2564 aa4.31□□□□□ -1.72
HERC4-206ENST00000427635 PLXNA4Q9HCM2 1894 aa4.31□□□□□ -1.72
HERC4-206ENST00000427635 A0A1W2PPM0 123 aa4.31□□□□□ -1.72
HERC4-206ENST00000427635 C11orf86A6NJI1 115 aa4.31□□□□□ -1.72
HERC4-206ENST00000427635 IGLV2-11P01706 119 aa4.31□□□□□ -1.72
HERC4-206ENST00000427635 PIK3CD-AS1Q5SR53 167 aa4.31□□□□□ -1.72
HERC4-206ENST00000427635 LIMD2Q9BT23 127 aa4.31□□□□□ -1.72
HERC4-206ENST00000427635 K7ERJ3 54 aa4.3□□□□□ -1.72
HERC4-206ENST00000427635 PRR26Q8N8Z3 221 aa4.3□□□□□ -1.72
HERC4-206ENST00000427635 SIPA1L1O43166 1804 aa4.3□□□□□ -1.72
HERC4-206ENST00000427635 POLEQ07864 2286 aa4.3□□□□□ -1.72
HERC4-206ENST00000427635 LMO4P61968 165 aa4.3□□□□□ -1.72
HERC4-206ENST00000427635 UNQ9165/PRO28630Q6UXU0 137 aa4.3□□□□□ -1.72
HERC4-206ENST00000427635 MBD6Q96DN6 1003 aa4.3□□□□□ -1.72
HERC4-206ENST00000427635 RNF185Q96GF1 192 aa4.3□□□□□ -1.72
HERC4-206ENST00000427635 LRRK1Q38SD2 2015 aa4.3□□□□□ -1.72
HERC4-206ENST00000427635 SEC16AO15027 2179 aa4.3□□□□□ -1.72
HERC4-206ENST00000427635 M0R378 163 aa4.3□□□□□ -1.72
HERC4-206ENST00000427635 RPL39P62891 51 aaKnown RBP4.3□□□□□ -1.72
HERC4-206ENST00000427635 LINC01006Q8NI28 216 aa4.3□□□□□ -1.72
HERC4-206ENST00000427635 TRAV23DV6A0A075B6W5 121 aa4.3□□□□□ -1.72
HERC4-206ENST00000427635 TRBV6-8A0A0A6YYG3 113 aa4.3□□□□□ -1.72
HERC4-206ENST00000427635 PSMG3-AS1Q96PY0 264 aa4.3□□□□□ -1.72
HERC4-206ENST00000427635 EPG5Q9HCE0 2579 aa4.3□□□□□ -1.72
HERC4-206ENST00000427635 TRBV6-4A0A1B0GX49 114 aa4.3□□□□□ -1.72
HERC4-206ENST00000427635 TNRC6BQ9UPQ9 1833 aaKnown RBP4.3□□□□□ -1.72
HERC4-206ENST00000427635 ABCA2Q9BZC7 2435 aa4.29□□□□□ -1.72
HERC4-206ENST00000427635 REG3GQ6UW15 175 aa4.29□□□□□ -1.72
HERC4-206ENST00000427635 BBC3Q96PG8 261 aaPredicted RBP4.29□□□□□ -1.72
HERC4-206ENST00000427635 IGHV4-30-4P0DP06 118 aa4.29□□□□□ -1.72
HERC4-206ENST00000427635 PCNX2A6NKB5 2137 aa4.29□□□□□ -1.72
HERC4-206ENST00000427635 IGF2RP11717 2491 aa4.29□□□□□ -1.72
HERC4-206ENST00000427635 C10orf91Q5T1B1 145 aa4.29□□□□□ -1.72
HERC4-206ENST00000427635 SERP2Q8N6R1 65 aa4.29□□□□□ -1.72
HERC4-206ENST00000427635 CHD3Q12873 2000 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms