RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 RPL36ALQ969Q0 106 aaKnown RBP10.77□□□□□ -0.68
ACTB-204ENST00000425660 TMEM141Q96I45 108 aa10.77□□□□□ -0.68
ACTB-204ENST00000425660 DKK2Q9UBU2 259 aa10.77□□□□□ -0.68
ACTB-204ENST00000425660 A0A087WX48 190 aa10.77□□□□□ -0.69
ACTB-204ENST00000425660 LINC00587B1AMM8 73 aa10.77□□□□□ -0.69
ACTB-204ENST00000425660 ZNRF2Q8NHG8 242 aa10.77□□□□□ -0.69
ACTB-204ENST00000425660 BAALCQ8WXS3 180 aa10.77□□□□□ -0.69
ACTB-204ENST00000425660 DEFB130BP0DP73 79 aa10.76□□□□□ -0.69
ACTB-204ENST00000425660 DEFB130AP0DP74 79 aa10.76□□□□□ -0.69
ACTB-204ENST00000425660 FAM222AQ5U5X8 452 aa10.76□□□□□ -0.69
ACTB-204ENST00000425660 TRGV4A0A0C4DH28 118 aa10.75□□□□□ -0.69
ACTB-204ENST00000425660 hDV102S1A0JD36 115 aa10.75□□□□□ -0.69
ACTB-204ENST00000425660 HSBP1L1C9JCN9 74 aa10.75□□□□□ -0.69
ACTB-204ENST00000425660 IGLC3P0DOY3 106 aa10.75□□□□□ -0.69
ACTB-204ENST00000425660 UBE2D3P61077 147 aa10.75□□□□□ -0.69
ACTB-204ENST00000425660 UBE2D2P62837 147 aa10.75□□□□□ -0.69
ACTB-204ENST00000425660 DAZ4Q86SG3 579 aaKnown RBP10.75□□□□□ -0.69
ACTB-204ENST00000425660 DAZ3Q9NR90 486 aaKnown RBP10.75□□□□□ -0.69
ACTB-204ENST00000425660 COTL1Q14019 142 aa10.74□□□□□ -0.69
ACTB-204ENST00000425660 MIEN1Q9BRT3 115 aa10.74□□□□□ -0.69
ACTB-204ENST00000425660 CHCHD7Q9BUK0 85 aa10.74□□□□□ -0.69
ACTB-204ENST00000425660 MRPL35Q9NZE8 188 aaKnown RBP10.74□□□□□ -0.69
ACTB-204ENST00000425660 HHLA3Q9XRX5 114 aa10.74□□□□□ -0.69
ACTB-204ENST00000425660 PYGO1Q9Y3Y4 419 aa10.74□□□□□ -0.69
ACTB-204ENST00000425660 F8VRH5 84 aa10.73□□□□□ -0.69
ACTB-204ENST00000425660 DPM2O94777 84 aa10.73□□□□□ -0.69
ACTB-204ENST00000425660 IGKCP01834 107 aa10.73□□□□□ -0.69
ACTB-204ENST00000425660 NPSP0C0P6 89 aa10.73□□□□□ -0.69
ACTB-204ENST00000425660 PHLDA1Q8WV24 401 aaPredicted RBP10.73□□□□□ -0.69
ACTB-204ENST00000425660 IGHV3-38A0A0C4DH36 116 aa10.72□□□□□ -0.69
ACTB-204ENST00000425660 LINC00694P0DN24 101 aa10.72□□□□□ -0.69
ACTB-204ENST00000425660 PLNP26678 52 aa10.72□□□□□ -0.69
ACTB-204ENST00000425660 PRSS29PA6NIE9 313 aa10.72□□□□□ -0.69
ACTB-204ENST00000425660 DEFB4AO15263 64 aa10.72□□□□□ -0.69
ACTB-204ENST00000425660 PRADC1Q9BSG0 188 aa10.72□□□□□ -0.69
ACTB-204ENST00000425660 UQCR10Q9UDW1 63 aa10.72□□□□□ -0.69
ACTB-204ENST00000425660 GAGE12JA6NER3 117 aa10.71□□□□□ -0.69
ACTB-204ENST00000425660 GAGE1Q13065 139 aa10.71□□□□□ -0.69
ACTB-204ENST00000425660 GAGE4Q13068 117 aa10.71□□□□□ -0.69
ACTB-204ENST00000425660 GAGE5Q13069 117 aa10.71□□□□□ -0.69
ACTB-204ENST00000425660 PMVKQ15126 192 aa10.71□□□□□ -0.69
ACTB-204ENST00000425660 GAGE13Q4V321 117 aa10.71□□□□□ -0.69
ACTB-204ENST00000425660 GTSF1LQ9H1H1 148 aa10.71□□□□□ -0.69
ACTB-204ENST00000425660 NBEAL1Q6ZS30 2694 aa10.71□□□□□ -0.7
ACTB-204ENST00000425660 CST9LQ9H4G1 147 aa10.7□□□□□ -0.7
ACTB-204ENST00000425660 CHTOPQ9Y3Y2 248 aaKnown RBP10.7□□□□□ -0.7
ACTB-204ENST00000425660 NOTCH1P46531 2555 aa10.7□□□□□ -0.7
ACTB-204ENST00000425660 LOC100131303A0A0U1RQF7 123 aa10.7□□□□□ -0.7
ACTB-204ENST00000425660 SPART-AS1P0CW21 52 aa10.7□□□□□ -0.7
ACTB-204ENST00000425660 CRYBA4P53673 196 aa10.7□□□□□ -0.7
ACTB-204ENST00000425660 KRTAP21-3Q3LHN1 58 aa10.7□□□□□ -0.7
ACTB-204ENST00000425660 KPRPQ5T749 579 aaPredicted RBP10.7□□□□□ -0.7
ACTB-204ENST00000425660 NTM-AS1Q6ZSK4 140 aa10.7□□□□□ -0.7
ACTB-204ENST00000425660 STPG4Q8N801 248 aa10.7□□□□□ -0.7
ACTB-204ENST00000425660 FAM104AQ969W3 186 aa10.7□□□□□ -0.7
ACTB-204ENST00000425660 C14orf144Q96I85 54 aa10.7□□□□□ -0.7
ACTB-204ENST00000425660 PRO0255Q9UI72 69 aa10.7□□□□□ -0.7
ACTB-204ENST00000425660 CELA1Q9UNI1 258 aa10.7□□□□□ -0.7
ACTB-204ENST00000425660 UBE2D4Q9Y2X8 147 aa10.7□□□□□ -0.7
ACTB-204ENST00000425660 IGLV4-3A0A075B6K6 122 aa10.69□□□□□ -0.7
ACTB-204ENST00000425660 ANKRD39Q53RE8 183 aa10.69□□□□□ -0.7
ACTB-204ENST00000425660 PAPPA-AS1Q5QFB9 102 aa10.69□□□□□ -0.7
ACTB-204ENST00000425660 SPANXA1Q9NS26 97 aa10.69□□□□□ -0.7
ACTB-204ENST00000425660 TEX48A0A1B0GUV7 120 aa10.68□□□□□ -0.7
ACTB-204ENST00000425660 DAD1P61803 113 aa10.68□□□□□ -0.7
ACTB-204ENST00000425660 TIMM21Q9BVV7 248 aa10.68□□□□□ -0.7
ACTB-204ENST00000425660 IGLV4-69A0A075B6H9 119 aa10.67□□□□□ -0.7
ACTB-204ENST00000425660 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.67□□□□□ -0.7
ACTB-204ENST00000425660 IGKV2-29A2NJV5 120 aaPredicted RBP10.67□□□□□ -0.7
ACTB-204ENST00000425660 DEFA6Q01524 100 aa10.67□□□□□ -0.7
ACTB-204ENST00000425660 ZC2HC1BQ5TFG8 222 aa10.67□□□□□ -0.7
ACTB-204ENST00000425660 SBSPONQ8IVN8 264 aa10.67□□□□□ -0.7
ACTB-204ENST00000425660 AMELXQ99217 191 aa10.67□□□□□ -0.7
ACTB-204ENST00000425660 OPRPNQ99935 248 aaPredicted RBP10.67□□□□□ -0.7
ACTB-204ENST00000425660 MGAM2Q2M2H8 2515 aa10.67□□□□□ -0.7
ACTB-204ENST00000425660 COX8AP10176 69 aa10.66□□□□□ -0.7
ACTB-204ENST00000425660 CSDC2Q9Y534 153 aaKnown RBP10.66□□□□□ -0.7
ACTB-204ENST00000425660 ATP5G1P05496 136 aa10.65□□□□□ -0.7
ACTB-204ENST00000425660 MRPL52Q86TS9 123 aaKnown RBP10.65□□□□□ -0.7
ACTB-204ENST00000425660 VCX2Q9H322 139 aa10.65□□□□□ -0.7
ACTB-204ENST00000425660 C11orf68Q9H3H3 251 aaKnown RBP10.65□□□□□ -0.7
ACTB-204ENST00000425660 RETNQ9HD89 108 aa10.65□□□□□ -0.7
ACTB-204ENST00000425660 MRPS36P82909 103 aaKnown RBP10.65□□□□□ -0.71
ACTB-204ENST00000425660 SLC25A34Q6PIV7 304 aa10.65□□□□□ -0.71
ACTB-204ENST00000425660 CEMP1Q6PRD7 247 aaPredicted RBP10.65□□□□□ -0.71
ACTB-204ENST00000425660 FGF6P10767 208 aa10.64□□□□□ -0.71
ACTB-204ENST00000425660 GYPEP15421 78 aa10.64□□□□□ -0.71
ACTB-204ENST00000425660 NFE4Q86UQ8 179 aa10.64□□□□□ -0.71
ACTB-204ENST00000425660 H7C423 109 aa10.63□□□□□ -0.71
ACTB-204ENST00000425660 TMEM97Q5BJF2 176 aa10.63□□□□□ -0.71
ACTB-204ENST00000425660 VSIG2Q96IQ7 327 aa10.63□□□□□ -0.71
ACTB-204ENST00000425660 TRBV25-1A0A075B6N4 114 aa10.63□□□□□ -0.71
ACTB-204ENST00000425660 TRBV6-8A0A0A6YYG3 113 aa10.63□□□□□ -0.71
ACTB-204ENST00000425660 C11orf86A6NJI1 115 aa10.63□□□□□ -0.71
ACTB-204ENST00000425660 K7EIL1 84 aa10.63□□□□□ -0.71
ACTB-204ENST00000425660 PAX4O43316 350 aa10.63□□□□□ -0.71
ACTB-204ENST00000425660 BOD1L2Q8IYS8 172 aa10.63□□□□□ -0.71
ACTB-204ENST00000425660 MRPS16Q9Y3D3 137 aaKnown RBP10.63□□□□□ -0.71
ACTB-204ENST00000425660 IGKV2D-26A0A0A0MRZ7 120 aa10.62□□□□□ -0.71
ACTB-204ENST00000425660 DLEU1O43261 78 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms