RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 CLPSL2Q6UWE3 100 aa8.37□□□□□ -1.07
SGCE-203ENST00000425444 ENHOQ6UWT2 76 aa8.37□□□□□ -1.07
SGCE-203ENST00000425444 FAM231DQ6ZW35 169 aa8.37□□□□□ -1.07
SGCE-203ENST00000425444 GTSF1Q8WW33 167 aa8.37□□□□□ -1.07
SGCE-203ENST00000425444 BORCS7Q96B45 105 aa8.37□□□□□ -1.07
SGCE-203ENST00000425444 CNFNQ9BYD5 112 aa8.37□□□□□ -1.07
SGCE-203ENST00000425444 ZNF727A8MUV8 499 aa8.36□□□□□ -1.07
SGCE-203ENST00000425444 UBE2L6O14933 153 aa8.36□□□□□ -1.07
SGCE-203ENST00000425444 HLA-DQA1P01909 254 aa8.36□□□□□ -1.07
SGCE-203ENST00000425444 RBX1P62877 108 aa8.36□□□□□ -1.07
SGCE-203ENST00000425444 COTL1Q14019 142 aa8.36□□□□□ -1.07
SGCE-203ENST00000425444 MIAQ16674 131 aa8.36□□□□□ -1.07
SGCE-203ENST00000425444 PGLYRP4Q96LB8 373 aa8.36□□□□□ -1.07
SGCE-203ENST00000425444 TMEM243Q9BU79 118 aa8.36□□□□□ -1.07
SGCE-203ENST00000425444 TRAV26-2A0A0B4J265 109 aa8.35□□□□□ -1.07
SGCE-203ENST00000425444 OXTP01178 125 aa8.35□□□□□ -1.07
SGCE-203ENST00000425444 AMTP48728 403 aa8.35□□□□□ -1.07
SGCE-203ENST00000425444 C14orf177Q52M58 125 aa8.35□□□□□ -1.07
SGCE-203ENST00000425444 CT83Q5H943 113 aa8.35□□□□□ -1.07
SGCE-203ENST00000425444 LINC01551Q86U37 167 aa8.35□□□□□ -1.07
SGCE-203ENST00000425444 NDUFS6O75380 124 aaKnown RBP8.34□□□□□ -1.07
SGCE-203ENST00000425444 SRP19P09132 144 aaKnown RBP8.34□□□□□ -1.07
SGCE-203ENST00000425444 LINC00528Q8N1L1 170 aa8.34□□□□□ -1.07
SGCE-203ENST00000425444 LINC00269Q8N2A0 174 aa8.34□□□□□ -1.07
SGCE-203ENST00000425444 GATD1Q8NB37 220 aa8.34□□□□□ -1.07
SGCE-203ENST00000425444 TNXBP22105 4242 aa8.33□□□□□ -1.08
SGCE-203ENST00000425444 RPL39LQ96EH5 51 aaKnown RBP8.33□□□□□ -1.08
SGCE-203ENST00000425444 HIGD1CA8MV81 97 aa8.32□□□□□ -1.08
SGCE-203ENST00000425444 FOXA3P55318 350 aaPredicted RBP8.32□□□□□ -1.08
SGCE-203ENST00000425444 REG3AQ06141 175 aa8.32□□□□□ -1.08
SGCE-203ENST00000425444 LINC01620Q4KN68 170 aa8.32□□□□□ -1.08
SGCE-203ENST00000425444 TEX261Q6UWH6 196 aa8.32□□□□□ -1.08
SGCE-203ENST00000425444 TSKUQ8WUA8 353 aa8.32□□□□□ -1.08
SGCE-203ENST00000425444 PRR34Q9NV39 138 aa8.32□□□□□ -1.08
SGCE-203ENST00000425444 FAM30AQ9NZY2 134 aa8.32□□□□□ -1.08
SGCE-203ENST00000425444 IGLV10-54A0A075B6I4 117 aa8.31□□□□□ -1.08
SGCE-203ENST00000425444 USP17L23D6RBM5 183 aa8.31□□□□□ -1.08
SGCE-203ENST00000425444 C20orf203Q8NBC4 194 aa8.31□□□□□ -1.08
SGCE-203ENST00000425444 GFRA4Q9GZZ7 299 aa8.31□□□□□ -1.08
SGCE-203ENST00000425444 OSTCQ9NRP0 149 aa8.31□□□□□ -1.08
SGCE-203ENST00000425444 IGLV4-60A0A075B6I1 120 aa8.3□□□□□ -1.08
SGCE-203ENST00000425444 A0A1B0GUT8 65 aa8.3□□□□□ -1.08
SGCE-203ENST00000425444 APCSP02743 223 aa8.3□□□□□ -1.08
SGCE-203ENST00000425444 ADIRFQ15847 76 aa8.3□□□□□ -1.08
SGCE-203ENST00000425444 TMEM241Q24JQ0 296 aa8.3□□□□□ -1.08
SGCE-203ENST00000425444 FAM74A3Q4VXF1 159 aa8.3□□□□□ -1.08
SGCE-203ENST00000425444 A0A1B0GUV1 79 aa8.29□□□□□ -1.08
SGCE-203ENST00000425444 FAM231BA6NCW3 169 aa8.29□□□□□ -1.08
SGCE-203ENST00000425444 SDHAF1A6NFY7 115 aa8.29□□□□□ -1.08
SGCE-203ENST00000425444 PEA15Q15121 130 aa8.29□□□□□ -1.08
SGCE-203ENST00000425444 AMMECR1LQ6DCA0 310 aa8.29□□□□□ -1.08
SGCE-203ENST00000425444 Q6ZSA8 131 aa8.29□□□□□ -1.08
SGCE-203ENST00000425444 ISOC2Q96AB3 205 aa8.29□□□□□ -1.08
SGCE-203ENST00000425444 TRAV8-4A0A0B4J246 113 aa8.28□□□□□ -1.08
SGCE-203ENST00000425444 NCR2O95944 276 aa8.28□□□□□ -1.08
SGCE-203ENST00000425444 PMCHP20382 165 aa8.28□□□□□ -1.08
SGCE-203ENST00000425444 RPL23P62829 140 aaKnown RBP8.28□□□□□ -1.08
SGCE-203ENST00000425444 TMEM191AQ9H0A3 160 aa8.28□□□□□ -1.08
SGCE-203ENST00000425444 NAT8Q9UHE5 227 aa8.28□□□□□ -1.08
SGCE-203ENST00000425444 V9GYV3 84 aa8.28□□□□□ -1.08
SGCE-203ENST00000425444 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.27□□□□□ -1.09
SGCE-203ENST00000425444 IGKV3OR2-268A0A0C4DH90 116 aa8.27□□□□□ -1.09
SGCE-203ENST00000425444 IGKV2-29A2NJV5 120 aaPredicted RBP8.27□□□□□ -1.09
SGCE-203ENST00000425444 RIGQ13278 110 aa8.27□□□□□ -1.09
SGCE-203ENST00000425444 RNASEKQ6P5S7 137 aaKnown RBP8.27□□□□□ -1.09
SGCE-203ENST00000425444 ST20Q9HBF5 79 aa8.27□□□□□ -1.09
SGCE-203ENST00000425444 NAT8BQ9UHF3 227 aa8.27□□□□□ -1.09
SGCE-203ENST00000425444 TRBV6-5A0A0K0K1A5 114 aa8.26□□□□□ -1.09
SGCE-203ENST00000425444 C9JQL5 133 aa8.26□□□□□ -1.09
SGCE-203ENST00000425444 I3L3M4 83 aa8.26□□□□□ -1.09
SGCE-203ENST00000425444 SRSF3P84103 164 aaKnown RBP8.26□□□□□ -1.09
SGCE-203ENST00000425444 KRTAP26-1Q6PEX3 210 aa8.26□□□□□ -1.09
SGCE-203ENST00000425444 AMN1Q8IY45 258 aa8.26□□□□□ -1.09
SGCE-203ENST00000425444 NUP35Q8NFH5 326 aa8.26□□□□□ -1.09
SGCE-203ENST00000425444 GAS8-AS1O95177 125 aa8.25□□□□□ -1.09
SGCE-203ENST00000425444 PRSS1P07477 247 aa8.25□□□□□ -1.09
SGCE-203ENST00000425444 RAB4AP20338 218 aa8.25□□□□□ -1.09
SGCE-203ENST00000425444 SCXQ7RTU7 201 aa8.25□□□□□ -1.09
SGCE-203ENST00000425444 MRAP2Q96G30 205 aa8.25□□□□□ -1.09
SGCE-203ENST00000425444 RNF185Q96GF1 192 aa8.25□□□□□ -1.09
SGCE-203ENST00000425444 SMDT1Q9H4I9 107 aa8.25□□□□□ -1.09
SGCE-203ENST00000425444 TMEM242Q9NWH2 141 aa8.25□□□□□ -1.09
SGCE-203ENST00000425444 hDV102S1A0JD36 115 aa8.24□□□□□ -1.09
SGCE-203ENST00000425444 H7C423 109 aa8.24□□□□□ -1.09
SGCE-203ENST00000425444 FGF6P10767 208 aa8.24□□□□□ -1.09
SGCE-203ENST00000425444 DGAT2L7PQ6IED9 249 aa8.24□□□□□ -1.09
SGCE-203ENST00000425444 CLRN3Q8NCR9 226 aa8.24□□□□□ -1.09
SGCE-203ENST00000425444 TMEM101Q96IK0 257 aa8.24□□□□□ -1.09
SGCE-203ENST00000425444 BTF3L4Q96K17 158 aa8.24□□□□□ -1.09
SGCE-203ENST00000425444 CHAC1Q9BUX1 264 aa8.24□□□□□ -1.09
SGCE-203ENST00000425444 SMKR1H3BMG3 65 aa8.23□□□□□ -1.09
SGCE-203ENST00000425444 RPS10P46783 165 aaKnown RBP8.23□□□□□ -1.09
SGCE-203ENST00000425444 AP5S1Q9NUS5 200 aa8.23□□□□□ -1.09
SGCE-203ENST00000425444 GAGE12HA6NDE8 117 aa8.22□□□□□ -1.09
SGCE-203ENST00000425444 TSHBP01222 138 aa8.22□□□□□ -1.09
SGCE-203ENST00000425444 ZNF25P17030 456 aaPredicted RBP8.22□□□□□ -1.09
SGCE-203ENST00000425444 FCER1GP30273 86 aa8.22□□□□□ -1.09
SGCE-203ENST00000425444 CAMPP49913 170 aa8.22□□□□□ -1.09
SGCE-203ENST00000425444 SMIM27A0A1W2PRY6 76 aa8.21□□□□□ -1.1
SGCE-203ENST00000425444 PPP1R17O96001 155 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms