RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 IGLV4-60A0A075B6I1 120 aa14□□□□□ -0.17
CDCP1-202ENST00000425231 A8MWL6 223 aa14□□□□□ -0.17
CDCP1-202ENST00000425231 REG3AQ06141 175 aa14□□□□□ -0.17
CDCP1-202ENST00000425231 FAM210AQ96ND0 272 aa14□□□□□ -0.17
CDCP1-202ENST00000425231 SCXQ7RTU7 201 aa13.99□□□□□ -0.17
CDCP1-202ENST00000425231 PRSS1P07477 247 aa13.98□□□□□ -0.17
CDCP1-202ENST00000425231 COTL1Q14019 142 aa13.98□□□□□ -0.17
CDCP1-202ENST00000425231 CT83Q5H943 113 aa13.98□□□□□ -0.17
CDCP1-202ENST00000425231 LINC01551Q86U37 167 aa13.98□□□□□ -0.17
CDCP1-202ENST00000425231 SMIM7Q9BQ49 75 aa13.98□□□□□ -0.17
CDCP1-202ENST00000425231 GFRA4Q9GZZ7 299 aa13.98□□□□□ -0.17
CDCP1-202ENST00000425231 MYCBP2O75592 4640 aa13.98□□□□□ -0.17
CDCP1-202ENST00000425231 SMIM15Q7Z3B0 74 aa13.98□□□□□ -0.17
CDCP1-202ENST00000425231 RPL39LQ96EH5 51 aaKnown RBP13.98□□□□□ -0.17
CDCP1-202ENST00000425231 CHAC1Q9BUX1 264 aa13.98□□□□□ -0.17
CDCP1-202ENST00000425231 FLG2Q5D862 2391 aaPredicted RBP13.97□□□□□ -0.17
CDCP1-202ENST00000425231 HERC1Q15751 4861 aa13.97□□□□□ -0.17
CDCP1-202ENST00000425231 IGLV10-54A0A075B6I4 117 aa13.97□□□□□ -0.17
CDCP1-202ENST00000425231 SRP19P09132 144 aaKnown RBP13.97□□□□□ -0.17
CDCP1-202ENST00000425231 AMTP48728 403 aa13.97□□□□□ -0.17
CDCP1-202ENST00000425231 TRAV8-4A0A0B4J246 113 aa13.96□□□□□ -0.18
CDCP1-202ENST00000425231 LINC00528Q8N1L1 170 aa13.96□□□□□ -0.18
CDCP1-202ENST00000425231 ZNF727A8MUV8 499 aa13.95□□□□□ -0.18
CDCP1-202ENST00000425231 UBE2L6O14933 153 aa13.95□□□□□ -0.18
CDCP1-202ENST00000425231 DGAT2L7PQ6IED9 249 aa13.95□□□□□ -0.18
CDCP1-202ENST00000425231 TEX261Q6UWH6 196 aa13.95□□□□□ -0.18
CDCP1-202ENST00000425231 CIRBP-AS1Q8TBR5 109 aa13.94□□□□□ -0.18
CDCP1-202ENST00000425231 TSKUQ8WUA8 353 aa13.94□□□□□ -0.18
CDCP1-202ENST00000425231 OSTCQ9NRP0 149 aa13.93□□□□□ -0.18
CDCP1-202ENST00000425231 HIGD1CA8MV81 97 aa13.92□□□□□ -0.18
CDCP1-202ENST00000425231 PLA2G1BP04054 148 aaKnown RBP13.92□□□□□ -0.18
CDCP1-202ENST00000425231 C9orf163Q8N9P6 203 aa13.92□□□□□ -0.18
CDCP1-202ENST00000425231 FAM231BA6NCW3 169 aa13.91□□□□□ -0.18
CDCP1-202ENST00000425231 SDHAF1A6NFY7 115 aa13.91□□□□□ -0.18
CDCP1-202ENST00000425231 NCR2O95944 276 aa13.91□□□□□ -0.18
CDCP1-202ENST00000425231 CLRN3Q8NCR9 226 aa13.91□□□□□ -0.18
CDCP1-202ENST00000425231 TRBV6-5A0A0K0K1A5 114 aa13.9□□□□□ -0.18
CDCP1-202ENST00000425231 A0A1B0GUT8 65 aa13.9□□□□□ -0.18
CDCP1-202ENST00000425231 GAS8-AS1O95177 125 aa13.9□□□□□ -0.18
CDCP1-202ENST00000425231 BORCS7Q96B45 105 aa13.9□□□□□ -0.18
CDCP1-202ENST00000425231 DMBT1Q9UGM3 2413 aaPredicted RBP13.9□□□□□ -0.18
CDCP1-202ENST00000425231 TMEM191AQ9H0A3 160 aa13.9□□□□□ -0.19
CDCP1-202ENST00000425231 V9GYV3 84 aa13.9□□□□□ -0.19
CDCP1-202ENST00000425231 C9JQL5 133 aa13.88□□□□□ -0.19
CDCP1-202ENST00000425231 RNF185Q96GF1 192 aa13.88□□□□□ -0.19
CDCP1-202ENST00000425231 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.87□□□□□ -0.19
CDCP1-202ENST00000425231 IGKV2-29A2NJV5 120 aaPredicted RBP13.87□□□□□ -0.19
CDCP1-202ENST00000425231 H7C423 109 aa13.87□□□□□ -0.19
CDCP1-202ENST00000425231 I3L3M4 83 aa13.87□□□□□ -0.19
CDCP1-202ENST00000425231 APCSP02743 223 aa13.87□□□□□ -0.19
CDCP1-202ENST00000425231 TMEM241Q24JQ0 296 aa13.87□□□□□ -0.19
CDCP1-202ENST00000425231 ISOC2Q96AB3 205 aa13.87□□□□□ -0.19
CDCP1-202ENST00000425231 RAB4AP20338 218 aa13.86□□□□□ -0.19
CDCP1-202ENST00000425231 PMCHP20382 165 aa13.86□□□□□ -0.19
CDCP1-202ENST00000425231 KRTAP10-4P60372 401 aaPredicted RBP13.86□□□□□ -0.19
CDCP1-202ENST00000425231 CNBPP62633 177 aaKnown RBP13.86□□□□□ -0.19
CDCP1-202ENST00000425231 RPL23P62829 140 aaKnown RBP13.86□□□□□ -0.19
CDCP1-202ENST00000425231 FAM74A3Q4VXF1 159 aa13.86□□□□□ -0.19
CDCP1-202ENST00000425231 SDIM1Q6ZPB5 146 aa13.86□□□□□ -0.19
CDCP1-202ENST00000425231 hDV102S1A0JD36 115 aa13.85□□□□□ -0.19
CDCP1-202ENST00000425231 FGF6P10767 208 aa13.85□□□□□ -0.19
CDCP1-202ENST00000425231 AMMECR1LQ6DCA0 310 aa13.85□□□□□ -0.19
CDCP1-202ENST00000425231 NUP35Q8NFH5 326 aa13.85□□□□□ -0.19
CDCP1-202ENST00000425231 SLPIP03973 132 aa13.84□□□□□ -0.19
CDCP1-202ENST00000425231 RPS10P46783 165 aaKnown RBP13.84□□□□□ -0.19
CDCP1-202ENST00000425231 SRSF3P84103 164 aaKnown RBP13.84□□□□□ -0.19
CDCP1-202ENST00000425231 AMN1Q8IY45 258 aa13.84□□□□□ -0.19
CDCP1-202ENST00000425231 ST20Q9HBF5 79 aa13.84□□□□□ -0.19
CDCP1-202ENST00000425231 IGKV3OR2-268A0A0C4DH90 116 aa13.83□□□□□ -0.2
CDCP1-202ENST00000425231 TSHBP01222 138 aa13.83□□□□□ -0.2
CDCP1-202ENST00000425231 ESDP10768 282 aa13.83□□□□□ -0.2
CDCP1-202ENST00000425231 POLR2KP53803 58 aaKnown RBP13.83□□□□□ -0.2
CDCP1-202ENST00000425231 RNASEKQ6P5S7 137 aaKnown RBP13.83□□□□□ -0.2
CDCP1-202ENST00000425231 MRAP2Q96G30 205 aa13.83□□□□□ -0.2
CDCP1-202ENST00000425231 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.83□□□□□ -0.2
CDCP1-202ENST00000425231 GAGE12HA6NDE8 117 aa13.82□□□□□ -0.2
CDCP1-202ENST00000425231 PANO1I0J062 215 aa13.82□□□□□ -0.2
CDCP1-202ENST00000425231 RIGQ13278 110 aa13.81□□□□□ -0.2
CDCP1-202ENST00000425231 NAT8Q9UHE5 227 aa13.81□□□□□ -0.2
CDCP1-202ENST00000425231 TRBV27A0A0K0K1C4 114 aa13.81□□□□□ -0.2
CDCP1-202ENST00000425231 ZNF25P17030 456 aaPredicted RBP13.81□□□□□ -0.2
CDCP1-202ENST00000425231 C15orf56Q8N910 161 aa13.81□□□□□ -0.2
CDCP1-202ENST00000425231 TMEM242Q9NWH2 141 aa13.81□□□□□ -0.2
CDCP1-202ENST00000425231 NAT8BQ9UHF3 227 aa13.81□□□□□ -0.2
CDCP1-202ENST00000425231 PEA15Q15121 130 aa13.8□□□□□ -0.2
CDCP1-202ENST00000425231 ADIRFQ15847 76 aa13.8□□□□□ -0.2
CDCP1-202ENST00000425231 CHCHD10Q8WYQ3 142 aaPredicted RBP13.8□□□□□ -0.2
CDCP1-202ENST00000425231 AP5S1Q9NUS5 200 aa13.8□□□□□ -0.2
CDCP1-202ENST00000425231 OR5A1Q8NGJ0 315 aa13.79□□□□□ -0.2
CDCP1-202ENST00000425231 SMDT1Q9H4I9 107 aa13.79□□□□□ -0.2
CDCP1-202ENST00000425231 SMIM27A0A1W2PRY6 76 aa13.78□□□□□ -0.2
CDCP1-202ENST00000425231 SMKR1H3BMG3 65 aa13.78□□□□□ -0.2
CDCP1-202ENST00000425231 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.77□□□□□ -0.21
CDCP1-202ENST00000425231 CIRBPQ14011 172 aaKnown RBP13.77□□□□□ -0.21
CDCP1-202ENST00000425231 CFAP161Q6P656 301 aa13.77□□□□□ -0.21
CDCP1-202ENST00000425231 NRACQ8N912 160 aa13.77□□□□□ -0.21
CDCP1-202ENST00000425231 BTF3L4Q96K17 158 aa13.77□□□□□ -0.21
CDCP1-202ENST00000425231 IGHV3-64A0A075B6Q5 118 aa13.76□□□□□ -0.21
CDCP1-202ENST00000425231 MRPL52Q86TS9 123 aaKnown RBP13.76□□□□□ -0.21
CDCP1-202ENST00000425231 TMEM101Q96IK0 257 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms