RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 TRGC1P0CF51 173 aa11.41□□□□□ -0.58
GPC1-203ENST00000425056 RPL37AP61513 92 aaKnown RBP11.41□□□□□ -0.58
GPC1-203ENST00000425056 RASL11AQ6T310 242 aa11.41□□□□□ -0.58
GPC1-203ENST00000425056 CLRN3Q8NCR9 226 aa11.41□□□□□ -0.58
GPC1-203ENST00000425056 PGLYRP4Q96LB8 373 aa11.41□□□□□ -0.58
GPC1-203ENST00000425056 TMEM243Q9BU79 118 aa11.41□□□□□ -0.58
GPC1-203ENST00000425056 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.41□□□□□ -0.58
GPC1-203ENST00000425056 PKHD1L1Q86WI1 4243 aa11.4□□□□□ -0.58
GPC1-203ENST00000425056 A0A1B0GUV1 79 aa11.4□□□□□ -0.58
GPC1-203ENST00000425056 LYZL1Q6UWQ5 148 aa11.4□□□□□ -0.58
GPC1-203ENST00000425056 DPH3P1Q9H4G8 78 aa11.4□□□□□ -0.58
GPC1-203ENST00000425056 IGLV4-60A0A075B6I1 120 aa11.39□□□□□ -0.59
GPC1-203ENST00000425056 IGLV10-54A0A075B6I4 117 aa11.39□□□□□ -0.59
GPC1-203ENST00000425056 TRAV8-4A0A0B4J246 113 aa11.39□□□□□ -0.59
GPC1-203ENST00000425056 CTRLP40313 264 aa11.39□□□□□ -0.59
GPC1-203ENST00000425056 CNBPP62633 177 aaKnown RBP11.39□□□□□ -0.59
GPC1-203ENST00000425056 NIT2Q9NQR4 276 aa11.39□□□□□ -0.59
GPC1-203ENST00000425056 BIN3Q9NQY0 253 aa11.39□□□□□ -0.59
GPC1-203ENST00000425056 LINC00862A6NCI5 91 aa11.38□□□□□ -0.59
GPC1-203ENST00000425056 PANO1I0J062 215 aa11.38□□□□□ -0.59
GPC1-203ENST00000425056 NTF3P20783 257 aa11.38□□□□□ -0.59
GPC1-203ENST00000425056 SDIM1Q6ZPB5 146 aa11.38□□□□□ -0.59
GPC1-203ENST00000425056 GFRA4Q9GZZ7 299 aa11.38□□□□□ -0.59
GPC1-203ENST00000425056 SRP19P09132 144 aaKnown RBP11.37□□□□□ -0.59
GPC1-203ENST00000425056 CIRBPQ14011 172 aaKnown RBP11.37□□□□□ -0.59
GPC1-203ENST00000425056 SERTAD4-AS1Q5TG53 156 aa11.37□□□□□ -0.59
GPC1-203ENST00000425056 WDR73Q6P4I2 378 aa11.37□□□□□ -0.59
GPC1-203ENST00000425056 UQCC3Q6UW78 93 aa11.37□□□□□ -0.59
GPC1-203ENST00000425056 CNFNQ9BYD5 112 aa11.37□□□□□ -0.59
GPC1-203ENST00000425056 HNRNPA3P51991 378 aaKnown RBP11.36□□□□□ -0.59
GPC1-203ENST00000425056 hDV102S1A0JD36 115 aa11.35□□□□□ -0.59
GPC1-203ENST00000425056 CEBPGP53567 150 aa11.35□□□□□ -0.59
GPC1-203ENST00000425056 SRSF3P84103 164 aaKnown RBP11.35□□□□□ -0.59
GPC1-203ENST00000425056 COTL1Q14019 142 aa11.35□□□□□ -0.59
GPC1-203ENST00000425056 COMMD7Q86VX2 200 aa11.35□□□□□ -0.59
GPC1-203ENST00000425056 NUDT10Q8NFP7 164 aa11.35□□□□□ -0.59
GPC1-203ENST00000425056 NUDT11Q96G61 164 aa11.35□□□□□ -0.59
GPC1-203ENST00000425056 HMCN2Q8NDA2 5059 aa11.34□□□□□ -0.59
GPC1-203ENST00000425056 UBE2L6O14933 153 aa11.34□□□□□ -0.59
GPC1-203ENST00000425056 AMTP48728 403 aa11.34□□□□□ -0.59
GPC1-203ENST00000425056 FAM74A3Q4VXF1 159 aa11.34□□□□□ -0.59
GPC1-203ENST00000425056 SMIM7Q9BQ49 75 aa11.33□□□□□ -0.6
GPC1-203ENST00000425056 RPP21Q9H633 154 aaKnown RBP11.33□□□□□ -0.6
GPC1-203ENST00000425056 IGHV3-64A0A075B6Q5 118 aa11.32□□□□□ -0.6
GPC1-203ENST00000425056 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.32□□□□□ -0.6
GPC1-203ENST00000425056 ZNF727A8MUV8 499 aa11.32□□□□□ -0.6
GPC1-203ENST00000425056 C9JQL5 133 aa11.32□□□□□ -0.6
GPC1-203ENST00000425056 SLPIP03973 132 aa11.32□□□□□ -0.6
GPC1-203ENST00000425056 TWIST1Q15672 202 aa11.32□□□□□ -0.6
GPC1-203ENST00000425056 GATD1Q8NB37 220 aa11.32□□□□□ -0.6
GPC1-203ENST00000425056 AP5S1Q9NUS5 200 aa11.32□□□□□ -0.6
GPC1-203ENST00000425056 K7EN84 100 aa11.31□□□□□ -0.6
GPC1-203ENST00000425056 RNASE7Q9H1E1 156 aaKnown RBP11.31□□□□□ -0.6
GPC1-203ENST00000425056 TRAV26-2A0A0B4J265 109 aa11.3□□□□□ -0.6
GPC1-203ENST00000425056 RNF185Q96GF1 192 aa11.3□□□□□ -0.6
GPC1-203ENST00000425056 NDUFA5Q16718 116 aa11.29□□□□□ -0.6
GPC1-203ENST00000425056 C15orf56Q8N910 161 aa11.29□□□□□ -0.6
GPC1-203ENST00000425056 OCC1Q8TAD7 63 aa11.29□□□□□ -0.6
GPC1-203ENST00000425056 SPACA4Q8TDM5 124 aa11.29□□□□□ -0.6
GPC1-203ENST00000425056 NCR2O95944 276 aa11.28□□□□□ -0.6
GPC1-203ENST00000425056 TMEM241Q24JQ0 296 aa11.28□□□□□ -0.6
GPC1-203ENST00000425056 GTSF1Q8WW33 167 aa11.28□□□□□ -0.6
GPC1-203ENST00000425056 A0A087WYN8 130 aa11.27□□□□□ -0.61
GPC1-203ENST00000425056 TMEM218A2RU14 115 aa11.27□□□□□ -0.61
GPC1-203ENST00000425056 GAGE12HA6NDE8 117 aa11.27□□□□□ -0.61
GPC1-203ENST00000425056 CHTF8P0CG12 524 aa11.27□□□□□ -0.61
GPC1-203ENST00000425056 RPL39LQ96EH5 51 aaKnown RBP11.27□□□□□ -0.61
GPC1-203ENST00000425056 NAT8Q9UHE5 227 aa11.27□□□□□ -0.61
GPC1-203ENST00000425056 CFAP161Q6P656 301 aa11.26□□□□□ -0.61
GPC1-203ENST00000425056 SMIM15Q7Z3B0 74 aa11.26□□□□□ -0.61
GPC1-203ENST00000425056 IGKV3OR2-268A0A0C4DH90 116 aa11.25□□□□□ -0.61
GPC1-203ENST00000425056 H7C423 109 aa11.25□□□□□ -0.61
GPC1-203ENST00000425056 APCSP02743 223 aa11.25□□□□□ -0.61
GPC1-203ENST00000425056 AMMECR1LQ6DCA0 310 aa11.25□□□□□ -0.61
GPC1-203ENST00000425056 Q6ZRU5 148 aa11.25□□□□□ -0.61
GPC1-203ENST00000425056 LINC01551Q86U37 167 aa11.25□□□□□ -0.61
GPC1-203ENST00000425056 PLA2G2DQ9UNK4 145 aa11.25□□□□□ -0.61
GPC1-203ENST00000425056 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.24□□□□□ -0.61
GPC1-203ENST00000425056 IGKV2-29A2NJV5 120 aaPredicted RBP11.24□□□□□ -0.61
GPC1-203ENST00000425056 SDHAF1A6NFY7 115 aa11.24□□□□□ -0.61
GPC1-203ENST00000425056 F8W036 122 aa11.24□□□□□ -0.61
GPC1-203ENST00000425056 FOXA3P55318 350 aaPredicted RBP11.24□□□□□ -0.61
GPC1-203ENST00000425056 PNRC1Q12796 327 aaPredicted RBP11.24□□□□□ -0.61
GPC1-203ENST00000425056 FAM231DQ6ZW35 169 aa11.24□□□□□ -0.61
GPC1-203ENST00000425056 CHCHD10Q8WYQ3 142 aaPredicted RBP11.24□□□□□ -0.61
GPC1-203ENST00000425056 SEC11CQ9BY50 192 aa11.24□□□□□ -0.61
GPC1-203ENST00000425056 PLAC8Q9NZF1 115 aa11.24□□□□□ -0.61
GPC1-203ENST00000425056 MT1HL1P0DM35 61 aa11.23□□□□□ -0.61
GPC1-203ENST00000425056 FGF6P10767 208 aa11.23□□□□□ -0.61
GPC1-203ENST00000425056 RPS10P46783 165 aaKnown RBP11.23□□□□□ -0.61
GPC1-203ENST00000425056 DPH3Q96FX2 82 aa11.23□□□□□ -0.61
GPC1-203ENST00000425056 GVQW2A0A096LPI5 108 aaPredicted RBP11.22□□□□□ -0.61
GPC1-203ENST00000425056 TRBV6-5A0A0K0K1A5 114 aa11.22□□□□□ -0.61
GPC1-203ENST00000425056 A8MWL6 223 aa11.22□□□□□ -0.61
GPC1-203ENST00000425056 GATCO43716 136 aaKnown RBP11.22□□□□□ -0.61
GPC1-203ENST00000425056 ZNF25P17030 456 aaPredicted RBP11.22□□□□□ -0.61
GPC1-203ENST00000425056 RPL23P62829 140 aaKnown RBP11.22□□□□□ -0.61
GPC1-203ENST00000425056 HIGD2BQ4VC39 106 aa11.22□□□□□ -0.61
GPC1-203ENST00000425056 CT83Q5H943 113 aa11.22□□□□□ -0.61
GPC1-203ENST00000425056 RNASEKQ6P5S7 137 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 225.8 ms