RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 LYPD5Q6UWN5 251 aa9.26□□□□□ -0.93
PRPF39-202ENST00000424478 Q8N8P6 123 aa9.26□□□□□ -0.93
PRPF39-202ENST00000424478 DNAJC30Q96LL9 226 aa9.26□□□□□ -0.93
PRPF39-202ENST00000424478 LINC00614P0C842 121 aa9.26□□□□□ -0.93
PRPF39-202ENST00000424478 BTF3P20290 206 aaKnown RBP9.26□□□□□ -0.93
PRPF39-202ENST00000424478 COTL1Q14019 142 aa9.26□□□□□ -0.93
PRPF39-202ENST00000424478 KIR2DL4Q99706 377 aa9.25□□□□□ -0.93
PRPF39-202ENST00000424478 APLNQ9ULZ1 77 aa9.25□□□□□ -0.93
PRPF39-202ENST00000424478 GAGE6Q13070 117 aa9.25□□□□□ -0.93
PRPF39-202ENST00000424478 LAMTOR2Q9Y2Q5 125 aa9.25□□□□□ -0.93
PRPF39-202ENST00000424478 AMTP48728 403 aa9.24□□□□□ -0.93
PRPF39-202ENST00000424478 RNASE13Q5GAN3 156 aaKnown RBP9.24□□□□□ -0.93
PRPF39-202ENST00000424478 WFDC10BQ8IUB3 73 aa9.24□□□□□ -0.93
PRPF39-202ENST00000424478 OPRPNQ99935 248 aaPredicted RBP9.24□□□□□ -0.93
PRPF39-202ENST00000424478 GTSF1LQ9H1H1 148 aa9.24□□□□□ -0.93
PRPF39-202ENST00000424478 PPP1R17O96001 155 aa9.24□□□□□ -0.93
PRPF39-202ENST00000424478 SNRPEP62304 92 aaKnown RBP9.24□□□□□ -0.93
PRPF39-202ENST00000424478 DAZ4Q86SG3 579 aaKnown RBP9.24□□□□□ -0.93
PRPF39-202ENST00000424478 CHCHD7Q9BUK0 85 aa9.24□□□□□ -0.93
PRPF39-202ENST00000424478 DAZ3Q9NR90 486 aaKnown RBP9.24□□□□□ -0.93
PRPF39-202ENST00000424478 AP5S1Q9NUS5 200 aa9.24□□□□□ -0.93
PRPF39-202ENST00000424478 A0A096LNJ9 63 aa9.24□□□□□ -0.93
PRPF39-202ENST00000424478 NUPR2A6NF83 97 aa9.24□□□□□ -0.93
PRPF39-202ENST00000424478 Q0VG73 95 aa9.24□□□□□ -0.93
PRPF39-202ENST00000424478 LINC00173Q6ZV60 143 aa9.24□□□□□ -0.93
PRPF39-202ENST00000424478 Q8N976 141 aa9.24□□□□□ -0.93
PRPF39-202ENST00000424478 CHCHD5Q9BSY4 110 aa9.24□□□□□ -0.93
PRPF39-202ENST00000424478 KMT2AQ03164 3969 aa9.23□□□□□ -0.93
PRPF39-202ENST00000424478 TRBV6-8A0A0A6YYG3 113 aa9.23□□□□□ -0.93
PRPF39-202ENST00000424478 FABP4P15090 132 aa9.23□□□□□ -0.93
PRPF39-202ENST00000424478 LINC00588Q9Y4M8 146 aa9.23□□□□□ -0.93
PRPF39-202ENST00000424478 ZC2HC1BQ5TFG8 222 aa9.23□□□□□ -0.93
PRPF39-202ENST00000424478 NXT2Q9NPJ8 142 aaKnown RBP9.23□□□□□ -0.93
PRPF39-202ENST00000424478 IGHV1-24A0A0C4DH33 117 aa9.22□□□□□ -0.93
PRPF39-202ENST00000424478 LAGE3Q14657 143 aa9.22□□□□□ -0.93
PRPF39-202ENST00000424478 CASC10Q5T4H9 136 aa9.22□□□□□ -0.93
PRPF39-202ENST00000424478 TMEM262E9PQX1 116 aa9.22□□□□□ -0.93
PRPF39-202ENST00000424478 HSBP1O75506 76 aa9.22□□□□□ -0.93
PRPF39-202ENST00000424478 KLK5Q9Y337 293 aaPredicted RBP9.22□□□□□ -0.93
PRPF39-202ENST00000424478 PRSS47A8MTI9 375 aa9.21□□□□□ -0.93
PRPF39-202ENST00000424478 H3BNG1 76 aa9.21□□□□□ -0.93
PRPF39-202ENST00000424478 S100A6P06703 90 aa9.21□□□□□ -0.93
PRPF39-202ENST00000424478 IGHV3-30P01768 117 aa9.21□□□□□ -0.94
PRPF39-202ENST00000424478 IGHV3-33P01772 117 aa9.21□□□□□ -0.94
PRPF39-202ENST00000424478 IGHV3-30-3P0DP02 117 aa9.21□□□□□ -0.94
PRPF39-202ENST00000424478 IGHV3-30-5P0DP03 117 aa9.21□□□□□ -0.94
PRPF39-202ENST00000424478 CLPSL2Q6UWE3 100 aa9.21□□□□□ -0.94
PRPF39-202ENST00000424478 C15orf53Q8NAA6 179 aa9.2□□□□□ -0.94
PRPF39-202ENST00000424478 VPS13DQ5THJ4 4388 aa9.2□□□□□ -0.94
PRPF39-202ENST00000424478 TRBV25-1A0A075B6N4 114 aa9.2□□□□□ -0.94
PRPF39-202ENST00000424478 MPV17L2Q567V2 206 aa9.2□□□□□ -0.94
PRPF39-202ENST00000424478 C2orf66Q6UXQ4 117 aa9.2□□□□□ -0.94
PRPF39-202ENST00000424478 H0Y8G0 127 aa9.2□□□□□ -0.94
PRPF39-202ENST00000424478 DNAH10Q8IVF4 4471 aa9.19□□□□□ -0.94
PRPF39-202ENST00000424478 IGKV3OR2-268A0A0C4DH90 116 aa9.19□□□□□ -0.94
PRPF39-202ENST00000424478 TMEM243Q9BU79 118 aa9.19□□□□□ -0.94
PRPF39-202ENST00000424478 IGLV4-60A0A075B6I1 120 aa9.19□□□□□ -0.94
PRPF39-202ENST00000424478 ESDP10768 282 aa9.19□□□□□ -0.94
PRPF39-202ENST00000424478 C20orf203Q8NBC4 194 aa9.19□□□□□ -0.94
PRPF39-202ENST00000424478 RPL32P62910 135 aaKnown RBP9.18□□□□□ -0.94
PRPF39-202ENST00000424478 UBE2DNLQ8IWF7 75 aa9.18□□□□□ -0.94
PRPF39-202ENST00000424478 HYDINQ4G0P3 5121 aa9.18□□□□□ -0.94
PRPF39-202ENST00000424478 IFITM10A6NMD0 228 aa9.18□□□□□ -0.94
PRPF39-202ENST00000424478 UBE2L6O14933 153 aa9.18□□□□□ -0.94
PRPF39-202ENST00000424478 FGF6P10767 208 aa9.17□□□□□ -0.94
PRPF39-202ENST00000424478 CCL18P55774 89 aa9.17□□□□□ -0.94
PRPF39-202ENST00000424478 LELP1Q5T871 98 aa9.17□□□□□ -0.94
PRPF39-202ENST00000424478 ORMDL2Q53FV1 153 aa9.17□□□□□ -0.94
PRPF39-202ENST00000424478 CHCHD1Q96BP2 118 aaKnown RBP9.17□□□□□ -0.94
PRPF39-202ENST00000424478 HIST3H2BBQ8N257 126 aa9.16□□□□□ -0.94
PRPF39-202ENST00000424478 KMT2CQ8NEZ4 4911 aaKnown RBP9.16□□□□□ -0.94
PRPF39-202ENST00000424478 HBDP02042 147 aa9.16□□□□□ -0.94
PRPF39-202ENST00000424478 AMMECR1LQ6DCA0 310 aa9.16□□□□□ -0.94
PRPF39-202ENST00000424478 Q6ZUT4 128 aa9.16□□□□□ -0.94
PRPF39-202ENST00000424478 FAM104AQ969W3 186 aa9.16□□□□□ -0.94
PRPF39-202ENST00000424478 LINC01546A6NGU7 62 aa9.15□□□□□ -0.94
PRPF39-202ENST00000424478 COA6Q5JTJ3 125 aaKnown RBP9.15□□□□□ -0.94
PRPF39-202ENST00000424478 CYSLTR1Q9Y271 337 aa9.15□□□□□ -0.94
PRPF39-202ENST00000424478 UBE2D4Q9Y2X8 147 aa9.15□□□□□ -0.94
PRPF39-202ENST00000424478 C5orf52A6NGY3 159 aa9.15□□□□□ -0.95
PRPF39-202ENST00000424478 LY6G6CO95867 125 aa9.15□□□□□ -0.95
PRPF39-202ENST00000424478 RBX1P62877 108 aa9.15□□□□□ -0.95
PRPF39-202ENST00000424478 SCGB3A1Q96QR1 104 aa9.15□□□□□ -0.95
PRPF39-202ENST00000424478 A0A087WX48 190 aa9.14□□□□□ -0.95
PRPF39-202ENST00000424478 M0R2N4 97 aa9.14□□□□□ -0.95
PRPF39-202ENST00000424478 SH2D6Q7Z4S9 175 aa9.14□□□□□ -0.95
PRPF39-202ENST00000424478 TOMM6Q96B49 74 aa9.14□□□□□ -0.95
PRPF39-202ENST00000424478 PMCHL2Q9BQD1 86 aa9.14□□□□□ -0.95
PRPF39-202ENST00000424478 TRAV8-6A0A0B4J262 113 aa9.14□□□□□ -0.95
PRPF39-202ENST00000424478 KLK12Q9UKR0 248 aa9.14□□□□□ -0.95
PRPF39-202ENST00000424478 ANGP03950 147 aaKnown RBP9.13□□□□□ -0.95
PRPF39-202ENST00000424478 DGAT2L7PQ6IED9 249 aa9.13□□□□□ -0.95
PRPF39-202ENST00000424478 HIST1H2BLQ99880 126 aa9.13□□□□□ -0.95
PRPF39-202ENST00000424478 LEPROTL1O95214 131 aa9.13□□□□□ -0.95
PRPF39-202ENST00000424478 KRTAP1-5Q9BYS1 174 aa9.13□□□□□ -0.95
PRPF39-202ENST00000424478 Q9H8V8 135 aa9.13□□□□□ -0.95
PRPF39-202ENST00000424478 PRSS29PA6NIE9 313 aa9.12□□□□□ -0.95
PRPF39-202ENST00000424478 S100A2P29034 98 aa9.12□□□□□ -0.95
PRPF39-202ENST00000424478 SACSQ9NZJ4 4579 aa9.12□□□□□ -0.95
PRPF39-202ENST00000424478 IGLV10-54A0A075B6I4 117 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms