RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 PHLDA3Q9Y5J5 127 aa5.11□□□□□ -1.59
CNOT4-205ENST00000423368 IGHV3OR16-10A0A075B7F0 116 aa5.11□□□□□ -1.59
CNOT4-205ENST00000423368 FDCSPQ8NFU4 85 aa5.11□□□□□ -1.59
CNOT4-205ENST00000423368 GPR179Q6PRD1 2367 aa5.11□□□□□ -1.59
CNOT4-205ENST00000423368 PSPHP1O15172 72 aa5.1□□□□□ -1.59
CNOT4-205ENST00000423368 CCKP06307 115 aa5.1□□□□□ -1.59
CNOT4-205ENST00000423368 FAM218AQ96MZ4 157 aa5.1□□□□□ -1.59
CNOT4-205ENST00000423368 NDUFA12Q9UI09 145 aa5.1□□□□□ -1.59
CNOT4-205ENST00000423368 CXCL5P42830 114 aa5.1□□□□□ -1.59
CNOT4-205ENST00000423368 IGKV3D-15A0A087WSY6 115 aa5.1□□□□□ -1.59
CNOT4-205ENST00000423368 NDUFC2-KCTD14E9PQ53 114 aa5.1□□□□□ -1.59
CNOT4-205ENST00000423368 IGKV3-15P01624 115 aa5.1□□□□□ -1.59
CNOT4-205ENST00000423368 IGHV3-30-3P0DP02 117 aa5.1□□□□□ -1.59
CNOT4-205ENST00000423368 C9orf47Q6ZRZ4 202 aa5.1□□□□□ -1.59
CNOT4-205ENST00000423368 CNEP1R1Q8N9A8 125 aa5.1□□□□□ -1.59
CNOT4-205ENST00000423368 LTBP2Q14767 1821 aa5.09□□□□□ -1.59
CNOT4-205ENST00000423368 A8MU10 97 aa5.09□□□□□ -1.59
CNOT4-205ENST00000423368 TEX22C9J3V5 150 aa5.09□□□□□ -1.59
CNOT4-205ENST00000423368 H7BZZ5 65 aa5.09□□□□□ -1.59
CNOT4-205ENST00000423368 SAA4P35542 130 aa5.09□□□□□ -1.59
CNOT4-205ENST00000423368 DAD1P61803 113 aa5.09□□□□□ -1.59
CNOT4-205ENST00000423368 MRPL55Q7Z7F7 128 aaKnown RBP5.09□□□□□ -1.59
CNOT4-205ENST00000423368 KLK9Q9UKQ9 250 aa5.09□□□□□ -1.59
CNOT4-205ENST00000423368 IGHV1OR15-1A0A075B7D0 117 aa5.09□□□□□ -1.59
CNOT4-205ENST00000423368 IGLV3-32A0A0A0MS00 114 aa5.09□□□□□ -1.59
CNOT4-205ENST00000423368 IGHG3P01860 377 aa5.09□□□□□ -1.59
CNOT4-205ENST00000423368 ZNF491Q8N8L2 437 aa5.09□□□□□ -1.59
CNOT4-205ENST00000423368 CXXC4Q9H2H0 198 aa5.09□□□□□ -1.59
CNOT4-205ENST00000423368 CSMD2Q7Z408 3487 aa5.09□□□□□ -1.59
CNOT4-205ENST00000423368 IGHV5-10-1A0A0J9YXX1 117 aa5.08□□□□□ -1.6
CNOT4-205ENST00000423368 B3GALT5-AS1P59052 145 aa5.08□□□□□ -1.6
CNOT4-205ENST00000423368 TMEM61Q8N0U2 210 aa5.08□□□□□ -1.6
CNOT4-205ENST00000423368 GNRH2O43555 120 aa5.08□□□□□ -1.6
CNOT4-205ENST00000423368 SPANXCQ9NY87 97 aa5.08□□□□□ -1.6
CNOT4-205ENST00000423368 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.08□□□□□ -1.6
CNOT4-205ENST00000423368 SETD2Q9BYW2 2564 aaPredicted RBP5.07□□□□□ -1.6
CNOT4-205ENST00000423368 DEFB121Q5J5C9 76 aa5.07□□□□□ -1.6
CNOT4-205ENST00000423368 Q8NA96 180 aa5.07□□□□□ -1.6
CNOT4-205ENST00000423368 PTPN13Q12923 2485 aa5.07□□□□□ -1.6
CNOT4-205ENST00000423368 RAI1Q7Z5J4 1906 aaPredicted RBP5.07□□□□□ -1.6
CNOT4-205ENST00000423368 SDHAF1A6NFY7 115 aa5.07□□□□□ -1.6
CNOT4-205ENST00000423368 CCL11P51671 97 aa5.07□□□□□ -1.6
CNOT4-205ENST00000423368 CLEC19AQ6UXS0 136 aa5.07□□□□□ -1.6
CNOT4-205ENST00000423368 STHQ8IWL8 128 aa5.07□□□□□ -1.6
CNOT4-205ENST00000423368 SPTSSBQ8NFR3 76 aa5.07□□□□□ -1.6
CNOT4-205ENST00000423368 DEFB127Q9H1M4 99 aa5.07□□□□□ -1.6
CNOT4-205ENST00000423368 IGHV3-73A0A0B4J1V6 119 aa5.06□□□□□ -1.6
CNOT4-205ENST00000423368 IGHV7-4-1A0A0J9YVY3 117 aa5.06□□□□□ -1.6
CNOT4-205ENST00000423368 H3BRN7 92 aa5.06□□□□□ -1.6
CNOT4-205ENST00000423368 LEPROTO15243 131 aa5.06□□□□□ -1.6
CNOT4-205ENST00000423368 HTN1P15515 57 aa5.06□□□□□ -1.6
CNOT4-205ENST00000423368 NANOS2P60321 138 aaKnown RBP5.06□□□□□ -1.6
CNOT4-205ENST00000423368 HAMPP81172 84 aa5.06□□□□□ -1.6
CNOT4-205ENST00000423368 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.06□□□□□ -1.6
CNOT4-205ENST00000423368 SCXQ7RTU7 201 aa5.06□□□□□ -1.6
CNOT4-205ENST00000423368 UBE2D4Q9Y2X8 147 aa5.06□□□□□ -1.6
CNOT4-205ENST00000423368 PSMB8P28062 276 aa5.06□□□□□ -1.6
CNOT4-205ENST00000423368 PAPPA-AS1Q5QFB9 102 aa5.06□□□□□ -1.6
CNOT4-205ENST00000423368 PLA2G2DQ9UNK4 145 aa5.06□□□□□ -1.6
CNOT4-205ENST00000423368 CELSR1Q9NYQ6 3014 aa5.06□□□□□ -1.6
CNOT4-205ENST00000423368 LINC01546A6NGU7 62 aa5.06□□□□□ -1.6
CNOT4-205ENST00000423368 PIK3CD-AS1Q5SR53 167 aa5.06□□□□□ -1.6
CNOT4-205ENST00000423368 TMEM167AQ8TBQ9 72 aa5.06□□□□□ -1.6
CNOT4-205ENST00000423368 C11orf68Q9H3H3 251 aaKnown RBP5.06□□□□□ -1.6
CNOT4-205ENST00000423368 TMEM14CQ9P0S9 112 aa5.06□□□□□ -1.6
CNOT4-205ENST00000423368 IGIPA6NJ69 53 aa5.05□□□□□ -1.6
CNOT4-205ENST00000423368 ADORA2A-AS1P86434 159 aa5.05□□□□□ -1.6
CNOT4-205ENST00000423368 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.05□□□□□ -1.6
CNOT4-205ENST00000423368 LY6G5BQ8NDX9 201 aa5.05□□□□□ -1.6
CNOT4-205ENST00000423368 DEFB118Q96PH6 123 aa5.05□□□□□ -1.6
CNOT4-205ENST00000423368 ITPR1Q14643 2758 aa5.05□□□□□ -1.6
CNOT4-205ENST00000423368 COX7A2LO14548 114 aa5.05□□□□□ -1.6
CNOT4-205ENST00000423368 COX7A1P24310 79 aa5.05□□□□□ -1.6
CNOT4-205ENST00000423368 PRR4Q16378 134 aa5.05□□□□□ -1.6
CNOT4-205ENST00000423368 ZNF876PQ49A33 203 aa5.05□□□□□ -1.6
CNOT4-205ENST00000423368 PRR9Q5T870 116 aa5.05□□□□□ -1.6
CNOT4-205ENST00000423368 TRBV27A0A0K0K1C4 114 aa5.05□□□□□ -1.6
CNOT4-205ENST00000423368 RNASE4P34096 147 aaKnown RBP5.05□□□□□ -1.6
CNOT4-205ENST00000423368 TRAV10A0A0B4J240 114 aa5.04□□□□□ -1.6
CNOT4-205ENST00000423368 FAM222AQ5U5X8 452 aa5.04□□□□□ -1.6
CNOT4-205ENST00000423368 MUC22E2RYF6 1773 aaPredicted RBP5.04□□□□□ -1.6
CNOT4-205ENST00000423368 A0A087WYN8 130 aa5.04□□□□□ -1.6
CNOT4-205ENST00000423368 CLPSL1A2RUU4 121 aa5.04□□□□□ -1.6
CNOT4-205ENST00000423368 F6UB75 175 aa5.04□□□□□ -1.6
CNOT4-205ENST00000423368 CD28P10747 220 aa5.04□□□□□ -1.6
CNOT4-205ENST00000423368 GYPEP15421 78 aa5.04□□□□□ -1.6
CNOT4-205ENST00000423368 IGFL3Q6UXB1 125 aa5.04□□□□□ -1.6
CNOT4-205ENST00000423368 Q6ZTI0 123 aa5.04□□□□□ -1.6
CNOT4-205ENST00000423368 C22orf24Q9Y442 160 aa5.04□□□□□ -1.6
CNOT4-205ENST00000423368 TLN1Q9Y490 2541 aaKnown RBP5.03□□□□□ -1.6
CNOT4-205ENST00000423368 ATRXP46100 2492 aa5.03□□□□□ -1.6
CNOT4-205ENST00000423368 LECT2O14960 151 aa5.03□□□□□ -1.6
CNOT4-205ENST00000423368 IGKV3-20P01619 116 aa5.03□□□□□ -1.6
CNOT4-205ENST00000423368 MIAQ16674 131 aa5.03□□□□□ -1.6
CNOT4-205ENST00000423368 LITAFQ99732 161 aa5.03□□□□□ -1.6
CNOT4-205ENST00000423368 SRRM5B3KS81 715 aa5.03□□□□□ -1.6
CNOT4-205ENST00000423368 BUB3O43684 328 aa5.03□□□□□ -1.6
CNOT4-205ENST00000423368 IGLV2-23P01705 113 aa5.03□□□□□ -1.6
CNOT4-205ENST00000423368 LYPD1Q8N2G4 141 aa5.03□□□□□ -1.6
CNOT4-205ENST00000423368 MUC4Q99102 2169 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms