RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 CTRLP40313 264 aa11.86□□□□□ -0.51
SREBF1-206ENST00000423161 AMTP48728 403 aa11.85□□□□□ -0.51
SREBF1-206ENST00000423161 CNBPP62633 177 aaKnown RBP11.85□□□□□ -0.51
SREBF1-206ENST00000423161 COTL1Q14019 142 aa11.85□□□□□ -0.51
SREBF1-206ENST00000423161 SERTAD4-AS1Q5TG53 156 aa11.85□□□□□ -0.51
SREBF1-206ENST00000423161 WDR73Q6P4I2 378 aa11.85□□□□□ -0.51
SREBF1-206ENST00000423161 C9orf62Q8N4C0 152 aa11.85□□□□□ -0.51
SREBF1-206ENST00000423161 NUDT10Q8NFP7 164 aa11.85□□□□□ -0.51
SREBF1-206ENST00000423161 NUDT11Q96G61 164 aa11.85□□□□□ -0.51
SREBF1-206ENST00000423161 HNRNPA3P51991 378 aaKnown RBP11.84□□□□□ -0.51
SREBF1-206ENST00000423161 AP5S1Q9NUS5 200 aa11.84□□□□□ -0.51
SREBF1-206ENST00000423161 FAT3Q8TDW7 4589 aa11.83□□□□□ -0.52
SREBF1-206ENST00000423161 TWIST1Q15672 202 aa11.83□□□□□ -0.52
SREBF1-206ENST00000423161 CNFNQ9BYD5 112 aa11.83□□□□□ -0.52
SREBF1-206ENST00000423161 RPP21Q9H633 154 aaKnown RBP11.83□□□□□ -0.52
SREBF1-206ENST00000423161 SLC51BQ86UW2 128 aa11.82□□□□□ -0.52
SREBF1-206ENST00000423161 IGHV3-64A0A075B6Q5 118 aa11.81□□□□□ -0.52
SREBF1-206ENST00000423161 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.81□□□□□ -0.52
SREBF1-206ENST00000423161 TRAV26-2A0A0B4J265 109 aa11.81□□□□□ -0.52
SREBF1-206ENST00000423161 TAGLN2P37802 199 aaKnown RBP11.81□□□□□ -0.52
SREBF1-206ENST00000423161 CIRBPQ14011 172 aaKnown RBP11.81□□□□□ -0.52
SREBF1-206ENST00000423161 TCTE3Q8IZS6 198 aa11.81□□□□□ -0.52
SREBF1-206ENST00000423161 GATD1Q8NB37 220 aa11.81□□□□□ -0.52
SREBF1-206ENST00000423161 RNASE7Q9H1E1 156 aaKnown RBP11.81□□□□□ -0.52
SREBF1-206ENST00000423161 K7EN84 100 aa11.8□□□□□ -0.52
SREBF1-206ENST00000423161 IGKV3OR2-268A0A0C4DH90 116 aa11.79□□□□□ -0.52
SREBF1-206ENST00000423161 SLPIP03973 132 aa11.79□□□□□ -0.52
SREBF1-206ENST00000423161 OCC1Q8TAD7 63 aa11.79□□□□□ -0.52
SREBF1-206ENST00000423161 GAGE12HA6NDE8 117 aa11.78□□□□□ -0.52
SREBF1-206ENST00000423161 CHTF8P0CG12 524 aa11.78□□□□□ -0.52
SREBF1-206ENST00000423161 DPH3Q96FX2 82 aa11.78□□□□□ -0.52
SREBF1-206ENST00000423161 AMMECR1LQ6DCA0 310 aa11.77□□□□□ -0.53
SREBF1-206ENST00000423161 Q6ZNX1 250 aa11.77□□□□□ -0.53
SREBF1-206ENST00000423161 SMIM15Q7Z3B0 74 aa11.77□□□□□ -0.53
SREBF1-206ENST00000423161 C15orf56Q8N910 161 aa11.77□□□□□ -0.53
SREBF1-206ENST00000423161 RPL39LQ96EH5 51 aaKnown RBP11.77□□□□□ -0.53
SREBF1-206ENST00000423161 RNF185Q96GF1 192 aa11.77□□□□□ -0.53
SREBF1-206ENST00000423161 A0A087WYN8 130 aa11.76□□□□□ -0.53
SREBF1-206ENST00000423161 CFAP161Q6P656 301 aa11.76□□□□□ -0.53
SREBF1-206ENST00000423161 GTSF1Q8WW33 167 aa11.76□□□□□ -0.53
SREBF1-206ENST00000423161 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.75□□□□□ -0.53
SREBF1-206ENST00000423161 IGKV2-29A2NJV5 120 aaPredicted RBP11.75□□□□□ -0.53
SREBF1-206ENST00000423161 NCR2O95944 276 aa11.75□□□□□ -0.53
SREBF1-206ENST00000423161 APCSP02743 223 aa11.75□□□□□ -0.53
SREBF1-206ENST00000423161 FOXA3P55318 350 aaPredicted RBP11.75□□□□□ -0.53
SREBF1-206ENST00000423161 RNASEKQ6P5S7 137 aaKnown RBP11.75□□□□□ -0.53
SREBF1-206ENST00000423161 SPACA4Q8TDM5 124 aa11.75□□□□□ -0.53
SREBF1-206ENST00000423161 GATCO43716 136 aaKnown RBP11.74□□□□□ -0.53
SREBF1-206ENST00000423161 HIGD2BQ4VC39 106 aa11.74□□□□□ -0.53
SREBF1-206ENST00000423161 PLA2G2DQ9UNK4 145 aa11.74□□□□□ -0.53
SREBF1-206ENST00000423161 SDHAF1A6NFY7 115 aa11.73□□□□□ -0.53
SREBF1-206ENST00000423161 TMEM250H0YL14 139 aa11.73□□□□□ -0.53
SREBF1-206ENST00000423161 TEX261Q6UWH6 196 aa11.73□□□□□ -0.53
SREBF1-206ENST00000423161 CHCHD10Q8WYQ3 142 aaPredicted RBP11.73□□□□□ -0.53
SREBF1-206ENST00000423161 HMCN2Q8NDA2 5059 aa11.73□□□□□ -0.53
SREBF1-206ENST00000423161 H7C423 109 aa11.72□□□□□ -0.53
SREBF1-206ENST00000423161 FGF6P10767 208 aa11.72□□□□□ -0.53
SREBF1-206ENST00000423161 RPS10P46783 165 aaKnown RBP11.72□□□□□ -0.53
SREBF1-206ENST00000423161 Q6ZRU5 148 aa11.72□□□□□ -0.53
SREBF1-206ENST00000423161 A8MWL6 223 aa11.71□□□□□ -0.53
SREBF1-206ENST00000423161 COX6A2Q02221 97 aa11.71□□□□□ -0.53
SREBF1-206ENST00000423161 FAM231DQ6ZW35 169 aa11.71□□□□□ -0.53
SREBF1-206ENST00000423161 PLAC8Q9NZF1 115 aa11.71□□□□□ -0.53
SREBF1-206ENST00000423161 PMCHP20382 165 aa11.7□□□□□ -0.54
SREBF1-206ENST00000423161 CEBPGP53567 150 aa11.7□□□□□ -0.54
SREBF1-206ENST00000423161 BLOC1S1P78537 153 aa11.7□□□□□ -0.54
SREBF1-206ENST00000423161 ALKAL2Q6UX46 152 aa11.7□□□□□ -0.54
SREBF1-206ENST00000423161 I3L3M4 83 aa11.69□□□□□ -0.54
SREBF1-206ENST00000423161 ZNF25P17030 456 aaPredicted RBP11.69□□□□□ -0.54
SREBF1-206ENST00000423161 GVQW2A0A096LPI5 108 aaPredicted RBP11.68□□□□□ -0.54
SREBF1-206ENST00000423161 PHOX2AO14813 284 aa11.68□□□□□ -0.54
SREBF1-206ENST00000423161 NDUFS6O75380 124 aaKnown RBP11.68□□□□□ -0.54
SREBF1-206ENST00000423161 MT1HL1P0DM35 61 aa11.68□□□□□ -0.54
SREBF1-206ENST00000423161 CT83Q5H943 113 aa11.68□□□□□ -0.54
SREBF1-206ENST00000423161 OR5A1Q8NGJ0 315 aa11.68□□□□□ -0.54
SREBF1-206ENST00000423161 PRSS3P2Q8NHM4 247 aa11.68□□□□□ -0.54
SREBF1-206ENST00000423161 C7orf33Q8WU49 177 aa11.68□□□□□ -0.54
SREBF1-206ENST00000423161 BORCS7Q96B45 105 aa11.68□□□□□ -0.54
SREBF1-206ENST00000423161 BTF3L4Q96K17 158 aa11.68□□□□□ -0.54
SREBF1-206ENST00000423161 IGKV2-24A0A0C4DH68 120 aa11.67□□□□□ -0.54
SREBF1-206ENST00000423161 TRBV6-5A0A0K0K1A5 114 aa11.67□□□□□ -0.54
SREBF1-206ENST00000423161 FAM231BA6NCW3 169 aa11.67□□□□□ -0.54
SREBF1-206ENST00000423161 FOXI1Q12951 378 aa11.67□□□□□ -0.54
SREBF1-206ENST00000423161 MAJINQ3KP22 176 aa11.67□□□□□ -0.54
SREBF1-206ENST00000423161 TMEM101Q96IK0 257 aa11.67□□□□□ -0.54
SREBF1-206ENST00000423161 GAS8-AS1O95177 125 aa11.66□□□□□ -0.54
SREBF1-206ENST00000423161 XCL1P47992 114 aa11.66□□□□□ -0.54
SREBF1-206ENST00000423161 AKAP14Q86UN6 197 aa11.66□□□□□ -0.54
SREBF1-206ENST00000423161 LYPD6BQ8NI32 183 aa11.66□□□□□ -0.54
SREBF1-206ENST00000423161 ST20Q9HBF5 79 aa11.66□□□□□ -0.54
SREBF1-206ENST00000423161 TMEM242Q9NWH2 141 aa11.66□□□□□ -0.54
SREBF1-206ENST00000423161 TSHBP01222 138 aa11.65□□□□□ -0.54
SREBF1-206ENST00000423161 MRAP2Q96G30 205 aa11.65□□□□□ -0.54
SREBF1-206ENST00000423161 SMIM7Q9BQ49 75 aa11.65□□□□□ -0.54
SREBF1-206ENST00000423161 LINC00959A0A1B0GUT2 108 aa11.64□□□□□ -0.55
SREBF1-206ENST00000423161 A0A1B0GUT8 65 aa11.64□□□□□ -0.55
SREBF1-206ENST00000423161 HIGD1CA8MV81 97 aa11.64□□□□□ -0.55
SREBF1-206ENST00000423161 CCL25O15444 150 aa11.64□□□□□ -0.55
SREBF1-206ENST00000423161 ESDP10768 282 aa11.64□□□□□ -0.55
SREBF1-206ENST00000423161 STPG4Q8N801 248 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms