RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 IGHV3-33P01772 117 aa6.3□□□□□ -1.4
PDGFC-202ENST00000422544 DNAH10OSP0CZ25 163 aa6.3□□□□□ -1.4
PDGFC-202ENST00000422544 IGHV3-30-3P0DP02 117 aa6.3□□□□□ -1.4
PDGFC-202ENST00000422544 IGHV3-30-5P0DP03 117 aa6.3□□□□□ -1.4
PDGFC-202ENST00000422544 TMEM97Q5BJF2 176 aa6.3□□□□□ -1.4
PDGFC-202ENST00000422544 TMEM136Q6ZRR5 245 aa6.3□□□□□ -1.4
PDGFC-202ENST00000422544 NRACQ8N912 160 aa6.3□□□□□ -1.4
PDGFC-202ENST00000422544 KRTAP1-5Q9BYS1 174 aa6.3□□□□□ -1.4
PDGFC-202ENST00000422544 TRAV9-2A0A087WT02 112 aa6.29□□□□□ -1.4
PDGFC-202ENST00000422544 TGIF2-C20orf24A0A0A6YYL0 155 aa6.29□□□□□ -1.4
PDGFC-202ENST00000422544 TMEM262E9PQX1 116 aa6.29□□□□□ -1.4
PDGFC-202ENST00000422544 PPP1R17O96001 155 aa6.29□□□□□ -1.4
PDGFC-202ENST00000422544 PMCHP20382 165 aa6.29□□□□□ -1.4
PDGFC-202ENST00000422544 COTL1Q14019 142 aa6.29□□□□□ -1.4
PDGFC-202ENST00000422544 TTC32Q5I0X7 151 aa6.29□□□□□ -1.4
PDGFC-202ENST00000422544 LINC01556Q5JQF7 62 aa6.29□□□□□ -1.4
PDGFC-202ENST00000422544 Q8N3U1 123 aa6.29□□□□□ -1.4
PDGFC-202ENST00000422544 CHCHD5Q9BSY4 110 aa6.29□□□□□ -1.4
PDGFC-202ENST00000422544 TMEM70Q9BUB7 260 aa6.29□□□□□ -1.4
PDGFC-202ENST00000422544 TRBV24-1A0A075B6N3 115 aa6.28□□□□□ -1.4
PDGFC-202ENST00000422544 TRBV25-1A0A075B6N4 114 aa6.28□□□□□ -1.4
PDGFC-202ENST00000422544 IGHV1-24A0A0C4DH33 117 aa6.28□□□□□ -1.4
PDGFC-202ENST00000422544 I3L3M4 83 aa6.28□□□□□ -1.4
PDGFC-202ENST00000422544 VCYO14598 125 aa6.28□□□□□ -1.4
PDGFC-202ENST00000422544 TNFRSF6BO95407 300 aa6.28□□□□□ -1.4
PDGFC-202ENST00000422544 NPYP01303 97 aa6.28□□□□□ -1.4
PDGFC-202ENST00000422544 PPBPP02775 128 aa6.28□□□□□ -1.4
PDGFC-202ENST00000422544 POLR2KP53803 58 aaKnown RBP6.28□□□□□ -1.4
PDGFC-202ENST00000422544 SUMO2P61956 95 aaKnown RBP6.28□□□□□ -1.4
PDGFC-202ENST00000422544 ELOBQ15370 118 aa6.28□□□□□ -1.4
PDGFC-202ENST00000422544 IQCJQ1A5X6 159 aa6.28□□□□□ -1.4
PDGFC-202ENST00000422544 NIT1Q86X76 327 aa6.28□□□□□ -1.4
PDGFC-202ENST00000422544 ORMDL3Q8N138 153 aa6.28□□□□□ -1.4
PDGFC-202ENST00000422544 A0A087WX48 190 aa6.27□□□□□ -1.41
PDGFC-202ENST00000422544 APCSP02743 223 aa6.27□□□□□ -1.41
PDGFC-202ENST00000422544 AMTP48728 403 aa6.27□□□□□ -1.41
PDGFC-202ENST00000422544 GAGE6Q13070 117 aa6.27□□□□□ -1.41
PDGFC-202ENST00000422544 KIAA1644Q3SXP7 199 aa6.27□□□□□ -1.41
PDGFC-202ENST00000422544 C1orf134Q5TEV5 83 aa6.27□□□□□ -1.41
PDGFC-202ENST00000422544 PRELID3AQ96N28 172 aa6.27□□□□□ -1.41
PDGFC-202ENST00000422544 C20orf78Q9BR46 151 aa6.27□□□□□ -1.41
PDGFC-202ENST00000422544 TMEM243Q9BU79 118 aa6.27□□□□□ -1.41
PDGFC-202ENST00000422544 GNB1LQ9BYB4 327 aa6.27□□□□□ -1.41
PDGFC-202ENST00000422544 TRBV27A0A0K0K1C4 114 aa6.26□□□□□ -1.41
PDGFC-202ENST00000422544 K7EP13 123 aa6.26□□□□□ -1.41
PDGFC-202ENST00000422544 TSHBP01222 138 aa6.26□□□□□ -1.41
PDGFC-202ENST00000422544 HLA-DQA1P01909 254 aa6.26□□□□□ -1.41
PDGFC-202ENST00000422544 CBLN2Q8IUK8 224 aa6.26□□□□□ -1.41
PDGFC-202ENST00000422544 C6orf223Q8N319 242 aa6.26□□□□□ -1.41
PDGFC-202ENST00000422544 C10orf126Q8N4M7 172 aa6.26□□□□□ -1.41
PDGFC-202ENST00000422544 YPEL4Q96NS1 127 aa6.26□□□□□ -1.41
PDGFC-202ENST00000422544 KRTAP4-5Q9BYR2 181 aa6.26□□□□□ -1.41
PDGFC-202ENST00000422544 SMCO4Q9NRQ5 59 aa6.26□□□□□ -1.41
PDGFC-202ENST00000422544 DNAH5Q8TE73 4624 aa6.26□□□□□ -1.41
PDGFC-202ENST00000422544 LOC389332A0A1B0GUA5 103 aa6.25□□□□□ -1.41
PDGFC-202ENST00000422544 IBA57-AS1B1ANH7 110 aa6.25□□□□□ -1.41
PDGFC-202ENST00000422544 PHOX2AO14813 284 aa6.25□□□□□ -1.41
PDGFC-202ENST00000422544 RTL8CO15255 209 aa6.25□□□□□ -1.41
PDGFC-202ENST00000422544 GHRHP01286 108 aa6.25□□□□□ -1.41
PDGFC-202ENST00000422544 RBX1P62877 108 aa6.25□□□□□ -1.41
PDGFC-202ENST00000422544 FABP9Q0Z7S8 132 aa6.25□□□□□ -1.41
PDGFC-202ENST00000422544 COX19Q49B96 90 aa6.25□□□□□ -1.41
PDGFC-202ENST00000422544 MPV17L2Q567V2 206 aa6.25□□□□□ -1.41
PDGFC-202ENST00000422544 Q8N976 141 aa6.25□□□□□ -1.41
PDGFC-202ENST00000422544 CHCHD7Q9BUK0 85 aa6.25□□□□□ -1.41
PDGFC-202ENST00000422544 MRPL18Q9H0U6 180 aaKnown RBP6.25□□□□□ -1.41
PDGFC-202ENST00000422544 KLK12Q9UKR0 248 aa6.25□□□□□ -1.41
PDGFC-202ENST00000422544 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.24□□□□□ -1.41
PDGFC-202ENST00000422544 IGKV2-29A2NJV5 120 aaPredicted RBP6.24□□□□□ -1.41
PDGFC-202ENST00000422544 UBE2L6O14933 153 aa6.24□□□□□ -1.41
PDGFC-202ENST00000422544 FCER1GP30273 86 aa6.24□□□□□ -1.41
PDGFC-202ENST00000422544 PKIAP61925 76 aa6.24□□□□□ -1.41
PDGFC-202ENST00000422544 RPL32P62910 135 aaKnown RBP6.24□□□□□ -1.41
PDGFC-202ENST00000422544 KIR2DL4Q99706 377 aa6.24□□□□□ -1.41
PDGFC-202ENST00000422544 SMIM2Q9BVW6 85 aa6.24□□□□□ -1.41
PDGFC-202ENST00000422544 LAMTOR2Q9Y2Q5 125 aa6.24□□□□□ -1.41
PDGFC-202ENST00000422544 TRAPPC1Q9Y5R8 145 aa6.24□□□□□ -1.41
PDGFC-202ENST00000422544 TCAPO15273 167 aa6.23□□□□□ -1.41
PDGFC-202ENST00000422544 MT-ND6P03923 174 aa6.23□□□□□ -1.41
PDGFC-202ENST00000422544 ANGP03950 147 aaKnown RBP6.23□□□□□ -1.41
PDGFC-202ENST00000422544 ESDP10768 282 aa6.23□□□□□ -1.41
PDGFC-202ENST00000422544 BTF3P20290 206 aaKnown RBP6.23□□□□□ -1.41
PDGFC-202ENST00000422544 MAP1LC3AQ9H492 121 aa6.23□□□□□ -1.41
PDGFC-202ENST00000422544 Q9HAA7 133 aa6.23□□□□□ -1.41
PDGFC-202ENST00000422544 FAT1Q14517 4588 aa6.22□□□□□ -1.41
PDGFC-202ENST00000422544 IGLV4-60A0A075B6I1 120 aa6.22□□□□□ -1.41
PDGFC-202ENST00000422544 PRSS47A8MTI9 375 aa6.22□□□□□ -1.41
PDGFC-202ENST00000422544 H7C423 109 aa6.22□□□□□ -1.41
PDGFC-202ENST00000422544 SCO1O75880 301 aa6.22□□□□□ -1.41
PDGFC-202ENST00000422544 FGF6P10767 208 aa6.22□□□□□ -1.41
PDGFC-202ENST00000422544 RAB5AP20339 215 aa6.22□□□□□ -1.41
PDGFC-202ENST00000422544 AMMECR1LQ6DCA0 310 aa6.22□□□□□ -1.41
PDGFC-202ENST00000422544 RNASEKQ6P5S7 137 aaKnown RBP6.22□□□□□ -1.41
PDGFC-202ENST00000422544 NFE4Q86UQ8 179 aa6.22□□□□□ -1.41
PDGFC-202ENST00000422544 C20orf203Q8NBC4 194 aa6.22□□□□□ -1.41
PDGFC-202ENST00000422544 UBE2WQ96B02 151 aa6.22□□□□□ -1.41
PDGFC-202ENST00000422544 ALKBH7Q9BT30 221 aaPredicted RBP6.22□□□□□ -1.41
PDGFC-202ENST00000422544 TRAV8-3A0A0A6YYJ7 113 aa6.21□□□□□ -1.42
PDGFC-202ENST00000422544 A0A1B0GUV1 79 aa6.21□□□□□ -1.42
PDGFC-202ENST00000422544 PRSS29PA6NIE9 313 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms