RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 GTSF1Q8WW33 167 aa16.56■□□□□ 0.24
SMDT1-202ENST00000422252 COTL1Q14019 142 aa16.55■□□□□ 0.24
SMDT1-202ENST00000422252 CIRBP-AS1Q8TBR5 109 aa16.55■□□□□ 0.24
SMDT1-202ENST00000422252 DEFB104AQ8WTQ1 72 aa16.55■□□□□ 0.24
SMDT1-202ENST00000422252 IGLV4-60A0A075B6I1 120 aa16.54■□□□□ 0.24
SMDT1-202ENST00000422252 IGLV10-54A0A075B6I4 117 aa16.54■□□□□ 0.24
SMDT1-202ENST00000422252 UBE2L6O14933 153 aa16.54■□□□□ 0.24
SMDT1-202ENST00000422252 GATCO43716 136 aaKnown RBP16.54■□□□□ 0.24
SMDT1-202ENST00000422252 GATD1Q8NB37 220 aa16.54■□□□□ 0.24
SMDT1-202ENST00000422252 TRAV8-4A0A0B4J246 113 aa16.53■□□□□ 0.24
SMDT1-202ENST00000422252 TRAV26-2A0A0B4J265 109 aa16.53■□□□□ 0.24
SMDT1-202ENST00000422252 AMTP48728 403 aa16.53■□□□□ 0.24
SMDT1-202ENST00000422252 DGAT2L7PQ6IED9 249 aa16.53■□□□□ 0.24
SMDT1-202ENST00000422252 FAM231DQ6ZW35 169 aa16.53■□□□□ 0.24
SMDT1-202ENST00000422252 SMIM15Q7Z3B0 74 aa16.53■□□□□ 0.24
SMDT1-202ENST00000422252 CEBPGP53567 150 aa16.52■□□□□ 0.24
SMDT1-202ENST00000422252 GFRA4Q9GZZ7 299 aa16.51■□□□□ 0.23
SMDT1-202ENST00000422252 A8MWL6 223 aa16.5■□□□□ 0.23
SMDT1-202ENST00000422252 CLRN3Q8NCR9 226 aa16.5■□□□□ 0.23
SMDT1-202ENST00000422252 FOXA3P55318 350 aaPredicted RBP16.49■□□□□ 0.23
SMDT1-202ENST00000422252 C9orf163Q8N9P6 203 aa16.49■□□□□ 0.23
SMDT1-202ENST00000422252 CT83Q5H943 113 aa16.48■□□□□ 0.23
SMDT1-202ENST00000422252 TEX261Q6UWH6 196 aa16.48■□□□□ 0.23
SMDT1-202ENST00000422252 RPL39LQ96EH5 51 aaKnown RBP16.48■□□□□ 0.23
SMDT1-202ENST00000422252 EIF5A2Q9GZV4 153 aaKnown RBP16.48■□□□□ 0.23
SMDT1-202ENST00000422252 NDUFS6O75380 124 aaKnown RBP16.46■□□□□ 0.23
SMDT1-202ENST00000422252 SMIM7Q9BQ49 75 aa16.46■□□□□ 0.23
SMDT1-202ENST00000422252 NCR2O95944 276 aa16.45■□□□□ 0.22
SMDT1-202ENST00000422252 FAM210AQ96ND0 272 aa16.44■□□□□ 0.22
SMDT1-202ENST00000422252 hDV102S1A0JD36 115 aa16.43■□□□□ 0.22
SMDT1-202ENST00000422252 J3QL48 77 aa16.43■□□□□ 0.22
SMDT1-202ENST00000422252 KRTAP10-4P60372 401 aaPredicted RBP16.43■□□□□ 0.22
SMDT1-202ENST00000422252 CNBPP62633 177 aaKnown RBP16.43■□□□□ 0.22
SMDT1-202ENST00000422252 LINC01551Q86U37 167 aa16.43■□□□□ 0.22
SMDT1-202ENST00000422252 BORCS7Q96B45 105 aa16.43■□□□□ 0.22
SMDT1-202ENST00000422252 SDHAF1A6NFY7 115 aa16.42■□□□□ 0.22
SMDT1-202ENST00000422252 APCSP02743 223 aa16.42■□□□□ 0.22
SMDT1-202ENST00000422252 AMMECR1LQ6DCA0 310 aa16.41■□□□□ 0.22
SMDT1-202ENST00000422252 TSKUQ8WUA8 353 aa16.41■□□□□ 0.22
SMDT1-202ENST00000422252 ZNF727A8MUV8 499 aa16.4■□□□□ 0.22
SMDT1-202ENST00000422252 HIGD1CA8MV81 97 aa16.4■□□□□ 0.22
SMDT1-202ENST00000422252 H7C423 109 aa16.4■□□□□ 0.22
SMDT1-202ENST00000422252 SDIM1Q6ZPB5 146 aa16.4■□□□□ 0.22
SMDT1-202ENST00000422252 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.4■□□□□ 0.22
SMDT1-202ENST00000422252 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.39■□□□□ 0.21
SMDT1-202ENST00000422252 IGKV3OR2-268A0A0C4DH90 116 aa16.39■□□□□ 0.21
SMDT1-202ENST00000422252 A0A1B0GUT8 65 aa16.39■□□□□ 0.21
SMDT1-202ENST00000422252 IGKV2-29A2NJV5 120 aaPredicted RBP16.39■□□□□ 0.21
SMDT1-202ENST00000422252 KRTAP29-1A8MX34 341 aaPredicted RBP16.39■□□□□ 0.21
SMDT1-202ENST00000422252 SRP19P09132 144 aaKnown RBP16.39■□□□□ 0.21
SMDT1-202ENST00000422252 OSTCQ9NRP0 149 aa16.39■□□□□ 0.21
SMDT1-202ENST00000422252 AP5S1Q9NUS5 200 aa16.39■□□□□ 0.21
SMDT1-202ENST00000422252 TRBV6-5A0A0K0K1A5 114 aa16.38■□□□□ 0.21
SMDT1-202ENST00000422252 FAM231BA6NCW3 169 aa16.38■□□□□ 0.21
SMDT1-202ENST00000422252 I3L3M4 83 aa16.38■□□□□ 0.21
SMDT1-202ENST00000422252 RNASEKQ6P5S7 137 aaKnown RBP16.38■□□□□ 0.21
SMDT1-202ENST00000422252 GAGE12HA6NDE8 117 aa16.37■□□□□ 0.21
SMDT1-202ENST00000422252 PMCHP20382 165 aa16.37■□□□□ 0.21
SMDT1-202ENST00000422252 TMEM191AQ9H0A3 160 aa16.37■□□□□ 0.21
SMDT1-202ENST00000422252 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.36■□□□□ 0.21
SMDT1-202ENST00000422252 FGF6P10767 208 aa16.36■□□□□ 0.21
SMDT1-202ENST00000422252 PANO1I0J062 215 aa16.35■□□□□ 0.21
SMDT1-202ENST00000422252 GAS8-AS1O95177 125 aa16.35■□□□□ 0.21
SMDT1-202ENST00000422252 SLPIP03973 132 aa16.35■□□□□ 0.21
SMDT1-202ENST00000422252 ST20Q9HBF5 79 aa16.35■□□□□ 0.21
SMDT1-202ENST00000422252 IGHV3-64A0A075B6Q5 118 aa16.34■□□□□ 0.21
SMDT1-202ENST00000422252 A0A1B0GVG6 124 aa16.34■□□□□ 0.21
SMDT1-202ENST00000422252 ZNF25P17030 456 aaPredicted RBP16.34■□□□□ 0.21
SMDT1-202ENST00000422252 RPL37AP61513 92 aaKnown RBP16.34■□□□□ 0.21
SMDT1-202ENST00000422252 CFAP161Q6P656 301 aa16.34■□□□□ 0.21
SMDT1-202ENST00000422252 C15orf56Q8N910 161 aa16.34■□□□□ 0.21
SMDT1-202ENST00000422252 CHCHD10Q8WYQ3 142 aaPredicted RBP16.34■□□□□ 0.21
SMDT1-202ENST00000422252 RNF185Q96GF1 192 aa16.33■□□□□ 0.2
SMDT1-202ENST00000422252 RAB4AP20338 218 aa16.32■□□□□ 0.2
SMDT1-202ENST00000422252 MRAP2Q96G30 205 aa16.32■□□□□ 0.2
SMDT1-202ENST00000422252 V9GYV3 84 aa16.32■□□□□ 0.2
SMDT1-202ENST00000422252 TSHBP01222 138 aa16.31■□□□□ 0.2
SMDT1-202ENST00000422252 CIRBPQ14011 172 aaKnown RBP16.31■□□□□ 0.2
SMDT1-202ENST00000422252 ISOC2Q96AB3 205 aa16.31■□□□□ 0.2
SMDT1-202ENST00000422252 TMEM242Q9NWH2 141 aa16.31■□□□□ 0.2
SMDT1-202ENST00000422252 ESDP10768 282 aa16.3■□□□□ 0.2
SMDT1-202ENST00000422252 RPS10P46783 165 aaKnown RBP16.3■□□□□ 0.2
SMDT1-202ENST00000422252 TMEM241Q24JQ0 296 aa16.3■□□□□ 0.2
SMDT1-202ENST00000422252 FAM74A3Q4VXF1 159 aa16.3■□□□□ 0.2
SMDT1-202ENST00000422252 AMN1Q8IY45 258 aa16.3■□□□□ 0.2
SMDT1-202ENST00000422252 NUP35Q8NFH5 326 aa16.3■□□□□ 0.2
SMDT1-202ENST00000422252 TMEM101Q96IK0 257 aa16.3■□□□□ 0.2
SMDT1-202ENST00000422252 BTF3L4Q96K17 158 aa16.3■□□□□ 0.2
SMDT1-202ENST00000422252 POLR2KP53803 58 aaKnown RBP16.29■□□□□ 0.2
SMDT1-202ENST00000422252 RIGQ13278 110 aa16.29■□□□□ 0.2
SMDT1-202ENST00000422252 OR5A1Q8NGJ0 315 aa16.29■□□□□ 0.2
SMDT1-202ENST00000422252 TRBV27A0A0K0K1C4 114 aa16.28■□□□□ 0.2
SMDT1-202ENST00000422252 RPL23P62829 140 aaKnown RBP16.27■□□□□ 0.2
SMDT1-202ENST00000422252 HIGD2BQ4VC39 106 aa16.27■□□□□ 0.2
SMDT1-202ENST00000422252 FOXI1Q12951 378 aa16.26■□□□□ 0.19
SMDT1-202ENST00000422252 DPH3Q96FX2 82 aa16.26■□□□□ 0.19
SMDT1-202ENST00000422252 NAT8BQ9UHF3 227 aa16.26■□□□□ 0.19
SMDT1-202ENST00000422252 PKHD1L1Q86WI1 4243 aa16.26■□□□□ 0.19
SMDT1-202ENST00000422252 LRP1Q07954 4544 aaKnown RBP16.26■□□□□ 0.19
SMDT1-202ENST00000422252 OXTP01178 125 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms