RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 PRDM2Q13029 1718 aa-0.08□□□□□ -2.42
LINC00397-201ENST00000422074 PKDREJQ9NTG1 2253 aa-0.08□□□□□ -2.42
LINC00397-201ENST00000422074 MYH8P13535 1937 aa-0.09□□□□□ -2.42
LINC00397-201ENST00000422074 GRIN2AQ12879 1464 aa-0.09□□□□□ -2.42
LINC00397-201ENST00000422074 PXDNQ92626 1479 aa-0.09□□□□□ -2.42
LINC00397-201ENST00000422074 ZNF292O60281 2723 aa-0.09□□□□□ -2.42
LINC00397-201ENST00000422074 LOC105371267A0A1B0GV96 52 aa-0.09□□□□□ -2.42
LINC00397-201ENST00000422074 PPP1R17O96001 155 aa-0.09□□□□□ -2.42
LINC00397-201ENST00000422074 ARPC4P59998 168 aa-0.09□□□□□ -2.42
LINC00397-201ENST00000422074 R4GMQ9 66 aa-0.09□□□□□ -2.42
LINC00397-201ENST00000422074 CACNA1AO00555 2505 aa-0.09□□□□□ -2.42
LINC00397-201ENST00000422074 PLCE1Q9P212 2302 aa-0.09□□□□□ -2.42
LINC00397-201ENST00000422074 SPTBN1Q01082 2364 aaKnown RBP-0.1□□□□□ -2.42
LINC00397-201ENST00000422074 TRAV13-2A0A0B4J235 113 aa-0.1□□□□□ -2.43
LINC00397-201ENST00000422074 S100A3P33764 101 aa-0.1□□□□□ -2.43
LINC00397-201ENST00000422074 CCL18P55774 89 aa-0.1□□□□□ -2.43
LINC00397-201ENST00000422074 SDF2Q99470 211 aa-0.1□□□□□ -2.43
LINC00397-201ENST00000422074 SPCS1Q9Y6A9 102 aa-0.1□□□□□ -2.43
LINC00397-201ENST00000422074 PIEZO2Q9H5I5 2752 aa-0.1□□□□□ -2.43
LINC00397-201ENST00000422074 C2CD3Q4AC94 2353 aa-0.11□□□□□ -2.43
LINC00397-201ENST00000422074 MAP1BP46821 2468 aaKnown RBP-0.11□□□□□ -2.43
LINC00397-201ENST00000422074 CTXND1A0A1B0GTU2 59 aa-0.11□□□□□ -2.43
LINC00397-201ENST00000422074 SIX6O95475 246 aa-0.11□□□□□ -2.43
LINC00397-201ENST00000422074 HIST1H1DP16402 221 aaKnown RBP-0.11□□□□□ -2.43
LINC00397-201ENST00000422074 SMIM4Q8WVI0 70 aa-0.11□□□□□ -2.43
LINC00397-201ENST00000422074 TENM4Q6N022 2769 aa-0.11□□□□□ -2.43
LINC00397-201ENST00000422074 APC2O95996 2303 aa-0.12□□□□□ -2.43
LINC00397-201ENST00000422074 DCHS2Q6V1P9 2916 aa-0.12□□□□□ -2.43
LINC00397-201ENST00000422074 FAM25AB3EWG3 89 aa-0.12□□□□□ -2.43
LINC00397-201ENST00000422074 FAM25CB3EWG5 89 aa-0.12□□□□□ -2.43
LINC00397-201ENST00000422074 FAM25GB3EWG6 89 aa-0.12□□□□□ -2.43
LINC00397-201ENST00000422074 HCG22E2RYF7 251 aa-0.12□□□□□ -2.43
LINC00397-201ENST00000422074 HAMPP81172 84 aa-0.12□□□□□ -2.43
LINC00397-201ENST00000422074 RBM3P98179 157 aaKnown RBP-0.12□□□□□ -2.43
LINC00397-201ENST00000422074 WFDC2Q14508 124 aa-0.12□□□□□ -2.43
LINC00397-201ENST00000422074 C10orf128Q5T292 105 aa-0.12□□□□□ -2.43
LINC00397-201ENST00000422074 C12orf73Q69YU5 71 aa-0.12□□□□□ -2.43
LINC00397-201ENST00000422074 DPH3Q96FX2 82 aa-0.12□□□□□ -2.43
LINC00397-201ENST00000422074 MRC1P22897 1456 aa-0.12□□□□□ -2.43
LINC00397-201ENST00000422074 ZANQ9Y493 2812 aa-0.12□□□□□ -2.43
LINC00397-201ENST00000422074 HMCN2Q8NDA2 5059 aa-0.13□□□□□ -2.43
LINC00397-201ENST00000422074 STAB1Q9NY15 2570 aa-0.13□□□□□ -2.43
LINC00397-201ENST00000422074 CFTRP13569 1480 aa-0.13□□□□□ -2.43
LINC00397-201ENST00000422074 DEFB109BQ30KR1 87 aa-0.13□□□□□ -2.43
LINC00397-201ENST00000422074 PKD1L1Q8TDX9 2849 aa-0.13□□□□□ -2.43
LINC00397-201ENST00000422074 WNK3Q9BYP7 1800 aa-0.13□□□□□ -2.43
LINC00397-201ENST00000422074 ARAP2Q8WZ64 1704 aa-0.13□□□□□ -2.43
LINC00397-201ENST00000422074 KDM3BQ7LBC6 1761 aa-0.14□□□□□ -2.43
LINC00397-201ENST00000422074 SPTA1P02549 2419 aa-0.14□□□□□ -2.43
LINC00397-201ENST00000422074 ERCC6L2Q5T890 1561 aa-0.14□□□□□ -2.43
LINC00397-201ENST00000422074 WNK1Q9H4A3 2382 aa-0.14□□□□□ -2.43
LINC00397-201ENST00000422074 SPAARA0A1B0GVQ0 90 aa-0.14□□□□□ -2.43
LINC00397-201ENST00000422074 M0R135 149 aa-0.14□□□□□ -2.43
LINC00397-201ENST00000422074 Q8IZM0 81 aa-0.14□□□□□ -2.43
LINC00397-201ENST00000422074 TTC9CQ8N5M4 171 aa-0.14□□□□□ -2.43
LINC00397-201ENST00000422074 ARL11Q969Q4 196 aa-0.14□□□□□ -2.43
LINC00397-201ENST00000422074 LENEPQ9Y5L5 61 aa-0.14□□□□□ -2.43
LINC00397-201ENST00000422074 V9GYH0 126 aa-0.14□□□□□ -2.43
LINC00397-201ENST00000422074 CHD6Q8TD26 2715 aa-0.15□□□□□ -2.43
LINC00397-201ENST00000422074 BICRAQ9NZM4 1560 aa-0.15□□□□□ -2.43
LINC00397-201ENST00000422074 LRRC37A2A6NM11 1700 aa-0.15□□□□□ -2.43
LINC00397-201ENST00000422074 SPAG11BQ08648 103 aa-0.15□□□□□ -2.43
LINC00397-201ENST00000422074 KRTAP6-1Q3LI64 71 aa-0.15□□□□□ -2.43
LINC00397-201ENST00000422074 SPAG11AQ6PDA7 123 aa-0.15□□□□□ -2.43
LINC00397-201ENST00000422074 ANKRD17O75179 2603 aaKnown RBP-0.15□□□□□ -2.43
LINC00397-201ENST00000422074 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.15□□□□□ -2.43
LINC00397-201ENST00000422074 PPIP5K1Q6PFW1 1433 aa-0.15□□□□□ -2.43
LINC00397-201ENST00000422074 CSPG4Q6UVK1 2322 aa-0.15□□□□□ -2.43
LINC00397-201ENST00000422074 KMT2AQ03164 3969 aa-0.15□□□□□ -2.43
LINC00397-201ENST00000422074 LRP6O75581 1613 aa-0.16□□□□□ -2.43
LINC00397-201ENST00000422074 PPRC1Q5VV67 1664 aaKnown RBP-0.16□□□□□ -2.44
LINC00397-201ENST00000422074 COX17Q14061 63 aa-0.16□□□□□ -2.44
LINC00397-201ENST00000422074 CCDC58Q4VC31 144 aa-0.16□□□□□ -2.44
LINC00397-201ENST00000422074 RERGLQ9H628 205 aa-0.16□□□□□ -2.44
LINC00397-201ENST00000422074 PATJQ8NI35 1801 aa-0.16□□□□□ -2.44
LINC00397-201ENST00000422074 DOCK2Q92608 1830 aa-0.16□□□□□ -2.44
LINC00397-201ENST00000422074 CSMD3Q7Z407 3707 aa-0.16□□□□□ -2.44
LINC00397-201ENST00000422074 ACANP16112 2415 aa-0.17□□□□□ -2.44
LINC00397-201ENST00000422074 GVINP1Q7Z2Y8 2422 aa-0.17□□□□□ -2.44
LINC00397-201ENST00000422074 FXYD6-FXYD2A0A087WZ82 144 aa-0.17□□□□□ -2.44
LINC00397-201ENST00000422074 Q5VSD8 79 aa-0.17□□□□□ -2.44
LINC00397-201ENST00000422074 AGPAT4-IT1Q9H0P7 198 aa-0.17□□□□□ -2.44
LINC00397-201ENST00000422074 SERP1Q9Y6X1 66 aa-0.17□□□□□ -2.44
LINC00397-201ENST00000422074 HSPG2P98160 4391 aa-0.17□□□□□ -2.44
LINC00397-201ENST00000422074 LRP2P98164 4655 aa-0.17□□□□□ -2.44
LINC00397-201ENST00000422074 TENM2Q9NT68 2774 aa-0.17□□□□□ -2.44
LINC00397-201ENST00000422074 MYCBP2O75592 4640 aa-0.18□□□□□ -2.44
LINC00397-201ENST00000422074 SELENOWP63302 87 aa-0.18□□□□□ -2.44
LINC00397-201ENST00000422074 DCDP81605 110 aaKnown RBP-0.18□□□□□ -2.44
LINC00397-201ENST00000422074 TMEM170BQ5T4T1 132 aa-0.18□□□□□ -2.44
LINC00397-201ENST00000422074 Q6AWC8 147 aa-0.18□□□□□ -2.44
LINC00397-201ENST00000422074 Q8N8P6 123 aa-0.18□□□□□ -2.44
LINC00397-201ENST00000422074 TSC22D3Q99576 134 aa-0.18□□□□□ -2.44
LINC00397-201ENST00000422074 SNRNP25Q9BV90 132 aaKnown RBP-0.18□□□□□ -2.44
LINC00397-201ENST00000422074 NAA60Q9H7X0 242 aa-0.18□□□□□ -2.44
LINC00397-201ENST00000422074 DOCK1Q14185 1865 aa-0.18□□□□□ -2.44
LINC00397-201ENST00000422074 PHLPP1O60346 1717 aa-0.18□□□□□ -2.44
LINC00397-201ENST00000422074 VWFP04275 2813 aa-0.19□□□□□ -2.44
LINC00397-201ENST00000422074 NAIPQ13075 1403 aa-0.19□□□□□ -2.44
LINC00397-201ENST00000422074 SRRM2Q9UQ35 2752 aaKnown RBP-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms