RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 NIT2Q9NQR4 276 aa11.79□□□□□ -0.52
AC004540.1-203ENST00000421862 GNG13Q9P2W3 67 aa11.79□□□□□ -0.52
AC004540.1-203ENST00000421862 CTRLP40313 264 aa11.78□□□□□ -0.52
AC004540.1-203ENST00000421862 EIF5AP63241 154 aaKnown RBP11.78□□□□□ -0.52
AC004540.1-203ENST00000421862 WDR73Q6P4I2 378 aa11.78□□□□□ -0.52
AC004540.1-203ENST00000421862 CNFNQ9BYD5 112 aa11.78□□□□□ -0.52
AC004540.1-203ENST00000421862 TRBV20OR9-2A0A075B6H5 130 aa11.77□□□□□ -0.53
AC004540.1-203ENST00000421862 XKRY2A2RUG3 117 aa11.77□□□□□ -0.53
AC004540.1-203ENST00000421862 LRP2P98164 4655 aa11.77□□□□□ -0.53
AC004540.1-203ENST00000421862 AMTP48728 403 aa11.76□□□□□ -0.53
AC004540.1-203ENST00000421862 GNG4P50150 75 aa11.76□□□□□ -0.53
AC004540.1-203ENST00000421862 COTL1Q14019 142 aa11.76□□□□□ -0.53
AC004540.1-203ENST00000421862 LYZL1Q6UWQ5 148 aa11.76□□□□□ -0.53
AC004540.1-203ENST00000421862 RAB19A4D1S5 217 aa11.75□□□□□ -0.53
AC004540.1-203ENST00000421862 UBE2L6O14933 153 aa11.75□□□□□ -0.53
AC004540.1-203ENST00000421862 RAB5CP51148 216 aa11.75□□□□□ -0.53
AC004540.1-203ENST00000421862 MEF2BQ02080 365 aaPredicted RBP11.75□□□□□ -0.53
AC004540.1-203ENST00000421862 C9orf62Q8N4C0 152 aa11.75□□□□□ -0.53
AC004540.1-203ENST00000421862 PHOX2AO14813 284 aa11.74□□□□□ -0.53
AC004540.1-203ENST00000421862 NTF3P20783 257 aa11.74□□□□□ -0.53
AC004540.1-203ENST00000421862 SULT1A2P50226 295 aa11.74□□□□□ -0.53
AC004540.1-203ENST00000421862 GAGE12HA6NDE8 117 aa11.73□□□□□ -0.53
AC004540.1-203ENST00000421862 PDE6DO43924 150 aa11.73□□□□□ -0.53
AC004540.1-203ENST00000421862 IFNA1P01562 189 aa11.73□□□□□ -0.53
AC004540.1-203ENST00000421862 CFAP161Q6P656 301 aa11.72□□□□□ -0.53
AC004540.1-203ENST00000421862 C7orf33Q8WU49 177 aa11.72□□□□□ -0.53
AC004540.1-203ENST00000421862 BIN3Q9NQY0 253 aa11.72□□□□□ -0.53
AC004540.1-203ENST00000421862 GVQW2A0A096LPI5 108 aaPredicted RBP11.71□□□□□ -0.53
AC004540.1-203ENST00000421862 NDUFS6O75380 124 aaKnown RBP11.71□□□□□ -0.53
AC004540.1-203ENST00000421862 RPS10P46783 165 aaKnown RBP11.71□□□□□ -0.53
AC004540.1-203ENST00000421862 COX6A2Q02221 97 aa11.71□□□□□ -0.53
AC004540.1-203ENST00000421862 GATD1Q8NB37 220 aa11.71□□□□□ -0.53
AC004540.1-203ENST00000421862 NCR2O95944 276 aa11.7□□□□□ -0.54
AC004540.1-203ENST00000421862 PRR3P79522 188 aaKnown RBP11.7□□□□□ -0.54
AC004540.1-203ENST00000421862 Q6ZNX1 250 aa11.7□□□□□ -0.54
AC004540.1-203ENST00000421862 TRAV26-2A0A0B4J265 109 aa11.69□□□□□ -0.54
AC004540.1-203ENST00000421862 TEX46H3BTG2 121 aa11.69□□□□□ -0.54
AC004540.1-203ENST00000421862 H7C423 109 aa11.69□□□□□ -0.54
AC004540.1-203ENST00000421862 BCL2P10415 239 aa11.69□□□□□ -0.54
AC004540.1-203ENST00000421862 HIGD2BQ4VC39 106 aa11.69□□□□□ -0.54
AC004540.1-203ENST00000421862 NUDT10Q8NFP7 164 aa11.69□□□□□ -0.54
AC004540.1-203ENST00000421862 PRSS3P2Q8NHM4 247 aa11.69□□□□□ -0.54
AC004540.1-203ENST00000421862 CHCHD10Q8WYQ3 142 aaPredicted RBP11.69□□□□□ -0.54
AC004540.1-203ENST00000421862 DPH3Q96FX2 82 aa11.69□□□□□ -0.54
AC004540.1-203ENST00000421862 NUDT11Q96G61 164 aa11.69□□□□□ -0.54
AC004540.1-203ENST00000421862 LINC01600Q96MT4 127 aa11.68□□□□□ -0.54
AC004540.1-203ENST00000421862 MED9Q9NWA0 146 aa11.68□□□□□ -0.54
AC004540.1-203ENST00000421862 RNF213Q63HN8 5207 aa11.68□□□□□ -0.54
AC004540.1-203ENST00000421862 TWIST1Q15672 202 aa11.67□□□□□ -0.54
AC004540.1-203ENST00000421862 EIF5AL1Q6IS14 154 aaKnown RBP11.67□□□□□ -0.54
AC004540.1-203ENST00000421862 RPP21Q9H633 154 aaKnown RBP11.67□□□□□ -0.54
AC004540.1-203ENST00000421862 A0A096LNI7 61 aa11.66□□□□□ -0.54
AC004540.1-203ENST00000421862 IGKV2-24A0A0C4DH68 120 aa11.66□□□□□ -0.54
AC004540.1-203ENST00000421862 IGKV3OR2-268A0A0C4DH90 116 aa11.66□□□□□ -0.54
AC004540.1-203ENST00000421862 FOXI1Q12951 378 aa11.66□□□□□ -0.54
AC004540.1-203ENST00000421862 MAJINQ3KP22 176 aa11.66□□□□□ -0.54
AC004540.1-203ENST00000421862 RPL39LQ96EH5 51 aaKnown RBP11.66□□□□□ -0.54
AC004540.1-203ENST00000421862 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.65□□□□□ -0.54
AC004540.1-203ENST00000421862 IGKV2-29A2NJV5 120 aaPredicted RBP11.65□□□□□ -0.54
AC004540.1-203ENST00000421862 K7EN84 100 aa11.65□□□□□ -0.54
AC004540.1-203ENST00000421862 APCSP02743 223 aa11.65□□□□□ -0.54
AC004540.1-203ENST00000421862 FGF6P10767 208 aa11.65□□□□□ -0.54
AC004540.1-203ENST00000421862 ZNF25P17030 456 aaPredicted RBP11.65□□□□□ -0.54
AC004540.1-203ENST00000421862 AMMECR1LQ6DCA0 310 aa11.65□□□□□ -0.54
AC004540.1-203ENST00000421862 STPG4Q8N801 248 aa11.65□□□□□ -0.54
AC004540.1-203ENST00000421862 RNASE7Q9H1E1 156 aaKnown RBP11.65□□□□□ -0.54
AC004540.1-203ENST00000421862 GTSF1Q8WW33 167 aa11.64□□□□□ -0.55
AC004540.1-203ENST00000421862 SDHAF1A6NFY7 115 aa11.63□□□□□ -0.55
AC004540.1-203ENST00000421862 TAGLN2P37802 199 aaKnown RBP11.63□□□□□ -0.55
AC004540.1-203ENST00000421862 RNASEKQ6P5S7 137 aaKnown RBP11.63□□□□□ -0.55
AC004540.1-203ENST00000421862 TEX261Q6UWH6 196 aa11.63□□□□□ -0.55
AC004540.1-203ENST00000421862 OR5A1Q8NGJ0 315 aa11.63□□□□□ -0.55
AC004540.1-203ENST00000421862 A0A0J9YXV3 536 aa11.61□□□□□ -0.55
AC004540.1-203ENST00000421862 TRBV6-5A0A0K0K1A5 114 aa11.61□□□□□ -0.55
AC004540.1-203ENST00000421862 FAM231BA6NCW3 169 aa11.61□□□□□ -0.55
AC004540.1-203ENST00000421862 FOXA3P55318 350 aaPredicted RBP11.61□□□□□ -0.55
AC004540.1-203ENST00000421862 LINC00474Q9P2X8 69 aa11.61□□□□□ -0.55
AC004540.1-203ENST00000421862 PKIGQ9Y2B9 76 aa11.61□□□□□ -0.55
AC004540.1-203ENST00000421862 ESDP10768 282 aa11.6□□□□□ -0.55
AC004540.1-203ENST00000421862 OCC1Q8TAD7 63 aa11.6□□□□□ -0.55
AC004540.1-203ENST00000421862 IGHV1-58A0A0C4DH39 117 aa11.59□□□□□ -0.55
AC004540.1-203ENST00000421862 LINC00959A0A1B0GUT2 108 aa11.59□□□□□ -0.55
AC004540.1-203ENST00000421862 I3L3M4 83 aa11.59□□□□□ -0.55
AC004540.1-203ENST00000421862 SPINK6Q6UWN8 80 aa11.59□□□□□ -0.55
AC004540.1-203ENST00000421862 SMIM15Q7Z3B0 74 aa11.59□□□□□ -0.55
AC004540.1-203ENST00000421862 CCL25O15444 150 aa11.58□□□□□ -0.56
AC004540.1-203ENST00000421862 XCL1P47992 114 aa11.58□□□□□ -0.56
AC004540.1-203ENST00000421862 FAM231DQ6ZW35 169 aa11.58□□□□□ -0.56
AC004540.1-203ENST00000421862 LYPD6BQ8NI32 183 aa11.58□□□□□ -0.56
AC004540.1-203ENST00000421862 CARD19Q96LW7 228 aa11.58□□□□□ -0.56
AC004540.1-203ENST00000421862 FAM210AQ96ND0 272 aa11.58□□□□□ -0.56
AC004540.1-203ENST00000421862 TSHBP01222 138 aa11.57□□□□□ -0.56
AC004540.1-203ENST00000421862 KRTAP10-8P60410 259 aa11.57□□□□□ -0.56
AC004540.1-203ENST00000421862 ODF1Q14990 250 aa11.57□□□□□ -0.56
AC004540.1-203ENST00000421862 MRPL52Q86TS9 123 aaKnown RBP11.57□□□□□ -0.56
AC004540.1-203ENST00000421862 CT83Q5H943 113 aa11.56□□□□□ -0.56
AC004540.1-203ENST00000421862 SLC51BQ86UW2 128 aa11.56□□□□□ -0.56
AC004540.1-203ENST00000421862 TMEM101Q96IK0 257 aa11.56□□□□□ -0.56
AC004540.1-203ENST00000421862 BTF3L4Q96K17 158 aa11.56□□□□□ -0.56
AC004540.1-203ENST00000421862 GAS8-AS1O95177 125 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms