RNA–Protein interactions for RNA: ENST00000421127.6

CCDC17-202, Transcript of coiled-coil domain containing 17, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC17, Length 2,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17-202ENST00000421127 HIST2H2BCQ6DN03 193 aa13.63□□□□□ -0.23
CCDC17-202ENST00000421127 PLA2G2AP14555 144 aa13.62□□□□□ -0.23
CCDC17-202ENST00000421127 LINC01620Q4KN68 170 aa13.62□□□□□ -0.23
CCDC17-202ENST00000421127 C10orf99Q6UWK7 81 aa13.62□□□□□ -0.23
CCDC17-202ENST00000421127 TRBV30A0A0K0K1B3 111 aa13.61□□□□□ -0.23
CCDC17-202ENST00000421127 SYNJ2BPP57105 145 aa13.61□□□□□ -0.23
CCDC17-202ENST00000421127 LITAFQ99732 161 aa13.61□□□□□ -0.23
CCDC17-202ENST00000421127 ADARB2-AS1A8MUL3 147 aa13.6□□□□□ -0.23
CCDC17-202ENST00000421127 AVPP01185 164 aa13.6□□□□□ -0.23
CCDC17-202ENST00000421127 ELANEP08246 267 aa13.6□□□□□ -0.23
CCDC17-202ENST00000421127 ZFAND6Q6FIF0 208 aa13.6□□□□□ -0.23
CCDC17-202ENST00000421127 FAM104AQ969W3 186 aa13.6□□□□□ -0.23
CCDC17-202ENST00000421127 LINC01600Q96MT4 127 aa13.6□□□□□ -0.23
CCDC17-202ENST00000421127 ITPR2Q14571 2701 aa13.6□□□□□ -0.23
CCDC17-202ENST00000421127 IGHV3-73A0A0B4J1V6 119 aa13.59□□□□□ -0.23
CCDC17-202ENST00000421127 IGHV1-58A0A0C4DH39 117 aa13.59□□□□□ -0.23
CCDC17-202ENST00000421127 IGHV4-59P01825 116 aa13.59□□□□□ -0.23
CCDC17-202ENST00000421127 NTN5Q8WTR8 489 aaPredicted RBP13.59□□□□□ -0.23
CCDC17-202ENST00000421127 TNFRSF18Q9Y5U5 241 aa13.59□□□□□ -0.23
CCDC17-202ENST00000421127 CLUHP3Q96NS8 147 aa13.59□□□□□ -0.23
CCDC17-202ENST00000421127 SPANXDQ9BXN6 97 aa13.59□□□□□ -0.23
CCDC17-202ENST00000421127 BEX4Q9NWD9 120 aaPredicted RBP13.59□□□□□ -0.23
CCDC17-202ENST00000421127 SPANXCQ9NY87 97 aa13.59□□□□□ -0.23
CCDC17-202ENST00000421127 FASNP49327 2511 aaKnown RBP13.59□□□□□ -0.23
CCDC17-202ENST00000421127 TRAV8-3A0A0A6YYJ7 113 aa13.58□□□□□ -0.24
CCDC17-202ENST00000421127 B4DSR2 109 aa13.58□□□□□ -0.24
CCDC17-202ENST00000421127 TRIAP1O43715 76 aa13.58□□□□□ -0.24
CCDC17-202ENST00000421127 TRBV10-2A0A0K0K1G8 114 aa13.58□□□□□ -0.24
CCDC17-202ENST00000421127 PRSS2P07478 247 aa13.58□□□□□ -0.24
CCDC17-202ENST00000421127 RBMY1A1P0DJD3 496 aaKnown RBP13.58□□□□□ -0.24
CCDC17-202ENST00000421127 RBMY1CP0DJD4 496 aa13.58□□□□□ -0.24
CCDC17-202ENST00000421127 RBMY1FQ15415 496 aaKnown RBP13.58□□□□□ -0.24
CCDC17-202ENST00000421127 TEX29Q8N6K0 151 aa13.58□□□□□ -0.24
CCDC17-202ENST00000421127 CITED1Q99966 193 aa13.58□□□□□ -0.24
CCDC17-202ENST00000421127 NDUFA12Q9UI09 145 aa13.58□□□□□ -0.24
CCDC17-202ENST00000421127 CEMP1Q6PRD7 247 aaPredicted RBP13.57□□□□□ -0.24
CCDC17-202ENST00000421127 CCDC168Q8NDH2 2452 aa13.57□□□□□ -0.24
CCDC17-202ENST00000421127 TINCRA0A1B0GVN0 87 aa13.56□□□□□ -0.24
CCDC17-202ENST00000421127 RPL13AP40429 203 aaKnown RBP13.56□□□□□ -0.24
CCDC17-202ENST00000421127 PROK1P58294 105 aa13.56□□□□□ -0.24
CCDC17-202ENST00000421127 DEFB112Q30KQ8 113 aa13.56□□□□□ -0.24
CCDC17-202ENST00000421127 J3QKU1 62 aa13.56□□□□□ -0.24
CCDC17-202ENST00000421127 HTN1P15515 57 aa13.56□□□□□ -0.24
CCDC17-202ENST00000421127 MIAQ16674 131 aa13.56□□□□□ -0.24
CCDC17-202ENST00000421127 RNF183Q96D59 192 aa13.56□□□□□ -0.24
CCDC17-202ENST00000421127 ANAPC13Q9BS18 74 aa13.56□□□□□ -0.24
CCDC17-202ENST00000421127 SPANXA1Q9NS26 97 aa13.56□□□□□ -0.24
CCDC17-202ENST00000421127 ICOSQ9Y6W8 199 aa13.56□□□□□ -0.24
CCDC17-202ENST00000421127 AKAP9Q99996 3911 aa13.56□□□□□ -0.24
CCDC17-202ENST00000421127 RNASE13Q5GAN3 156 aaKnown RBP13.55□□□□□ -0.24
CCDC17-202ENST00000421127 VSIG2Q96IQ7 327 aa13.55□□□□□ -0.24
CCDC17-202ENST00000421127 DUX5Q96PT3 197 aa13.55□□□□□ -0.24
CCDC17-202ENST00000421127 GATA3P23771 443 aa13.55□□□□□ -0.24
CCDC17-202ENST00000421127 ADAMTSL4-AS1Q5T5F5 129 aa13.55□□□□□ -0.24
CCDC17-202ENST00000421127 HECTD1Q9ULT8 2610 aa13.55□□□□□ -0.24
CCDC17-202ENST00000421127 KNCNA6PVL3 124 aa13.54□□□□□ -0.24
CCDC17-202ENST00000421127 HOXD3P31249 432 aaPredicted RBP13.54□□□□□ -0.24
CCDC17-202ENST00000421127 Q5PR19 223 aa13.54□□□□□ -0.24
CCDC17-202ENST00000421127 SNCGO76070 127 aa13.54□□□□□ -0.24
CCDC17-202ENST00000421127 CSPG4Q6UVK1 2322 aa13.53□□□□□ -0.24
CCDC17-202ENST00000421127 H3BMM0 161 aa13.53□□□□□ -0.24
CCDC17-202ENST00000421127 COX6CP09669 75 aa13.53□□□□□ -0.24
CCDC17-202ENST00000421127 UBE2WQ96B02 151 aa13.53□□□□□ -0.24
CCDC17-202ENST00000421127 DUX3Q96PT4 197 aa13.53□□□□□ -0.24
CCDC17-202ENST00000421127 CHCHD7Q9BUK0 85 aa13.53□□□□□ -0.24
CCDC17-202ENST00000421127 YAE1D1Q9NRH1 226 aa13.53□□□□□ -0.24
CCDC17-202ENST00000421127 UBE2D4Q9Y2X8 147 aa13.53□□□□□ -0.24
CCDC17-202ENST00000421127 UNC79Q9P2D8 2635 aa13.53□□□□□ -0.24
CCDC17-202ENST00000421127 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.53□□□□□ -0.24
CCDC17-202ENST00000421127 TRAV8-4A0A0B4J246 113 aa13.52□□□□□ -0.24
CCDC17-202ENST00000421127 TEX49A0A1B0GTD5 131 aa13.52□□□□□ -0.25
CCDC17-202ENST00000421127 PIK3CD-AS1Q5SR53 167 aa13.52□□□□□ -0.25
CCDC17-202ENST00000421127 ZNF415Q09FC8 603 aa13.51□□□□□ -0.25
CCDC17-202ENST00000421127 C2orf82Q6UX34 121 aa13.51□□□□□ -0.25
CCDC17-202ENST00000421127 TEX15Q9BXT5 2789 aa13.51□□□□□ -0.25
CCDC17-202ENST00000421127 CREBBPQ92793 2442 aa13.51□□□□□ -0.25
CCDC17-202ENST00000421127 GAGE2BQ13066 116 aa13.51□□□□□ -0.25
CCDC17-202ENST00000421127 GAGE2EQ4V326 116 aa13.51□□□□□ -0.25
CCDC17-202ENST00000421127 MAPK1IP1LQ8NDC0 245 aa13.51□□□□□ -0.25
CCDC17-202ENST00000421127 GAGE2DQ9UEU5 116 aa13.51□□□□□ -0.25
CCDC17-202ENST00000421127 DEFB131AP59861 70 aa13.5□□□□□ -0.25
CCDC17-202ENST00000421127 PRRC2AP48634 2157 aaKnown RBP13.5□□□□□ -0.25
CCDC17-202ENST00000421127 PDZD2O15018 2839 aa13.5□□□□□ -0.25
CCDC17-202ENST00000421127 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.49□□□□□ -0.25
CCDC17-202ENST00000421127 IGKV2-29A2NJV5 120 aaPredicted RBP13.49□□□□□ -0.25
CCDC17-202ENST00000421127 A8MTW9 85 aa13.49□□□□□ -0.25
CCDC17-202ENST00000421127 TIMM17BO60830 172 aa13.49□□□□□ -0.25
CCDC17-202ENST00000421127 Q6ZSN1 163 aa13.49□□□□□ -0.25
CCDC17-202ENST00000421127 UBE2E2Q96LR5 201 aa13.49□□□□□ -0.25
CCDC17-202ENST00000421127 A8MZ25 164 aa13.49□□□□□ -0.25
CCDC17-202ENST00000421127 H3BT86 120 aa13.49□□□□□ -0.25
CCDC17-202ENST00000421127 H7C423 109 aa13.49□□□□□ -0.25
CCDC17-202ENST00000421127 NPC2P61916 151 aa13.49□□□□□ -0.25
CCDC17-202ENST00000421127 TLN2Q9Y4G6 2542 aa13.49□□□□□ -0.25
CCDC17-202ENST00000421127 IFITM1P13164 125 aa13.48□□□□□ -0.25
CCDC17-202ENST00000421127 TMEM61Q8N0U2 210 aa13.48□□□□□ -0.25
CCDC17-202ENST00000421127 LINC00467Q9BRT7 94 aa13.48□□□□□ -0.25
CCDC17-202ENST00000421127 Q9UF83 564 aa13.48□□□□□ -0.25
CCDC17-202ENST00000421127 ITPR3Q14573 2671 aa13.48□□□□□ -0.25
CCDC17-202ENST00000421127 DNAJC30Q96LL9 226 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 218.6 ms