RNA–Protein interactions for RNA: ENST00000417709.5

TTC38-202, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-202ENST00000417709 TMUB2Q71RG4 321 aa8.78□□□□□ -1
TTC38-202ENST00000417709 CHCHD10Q8WYQ3 142 aaPredicted RBP8.78□□□□□ -1
TTC38-202ENST00000417709 LINC00526Q96FQ7 95 aa8.78□□□□□ -1
TTC38-202ENST00000417709 NIT2Q9NQR4 276 aa8.78□□□□□ -1
TTC38-202ENST00000417709 FXYD6-FXYD2A0A087WZ82 144 aa8.77□□□□□ -1.01
TTC38-202ENST00000417709 SCO2A0A1W2PP80 73 aa8.77□□□□□ -1.01
TTC38-202ENST00000417709 COTL1Q14019 142 aa8.77□□□□□ -1.01
TTC38-202ENST00000417709 LINC00474Q9P2X8 69 aa8.77□□□□□ -1.01
TTC38-202ENST00000417709 SFT2D1Q8WV19 159 aa8.76□□□□□ -1.01
TTC38-202ENST00000417709 PGLYRP4Q96LB8 373 aa8.76□□□□□ -1.01
TTC38-202ENST00000417709 GVQW2A0A096LPI5 108 aaPredicted RBP8.75□□□□□ -1.01
TTC38-202ENST00000417709 FAM231BA6NCW3 169 aa8.75□□□□□ -1.01
TTC38-202ENST00000417709 AMMECR1LQ6DCA0 310 aa8.75□□□□□ -1.01
TTC38-202ENST00000417709 RNASEKQ6P5S7 137 aaKnown RBP8.75□□□□□ -1.01
TTC38-202ENST00000417709 FER1L6-AS1Q8NA97 138 aa8.75□□□□□ -1.01
TTC38-202ENST00000417709 IGLC6P0CF74 106 aa8.73□□□□□ -1.01
TTC38-202ENST00000417709 CACNG7P62955 275 aa8.73□□□□□ -1.01
TTC38-202ENST00000417709 FOXI1Q12951 378 aa8.73□□□□□ -1.01
TTC38-202ENST00000417709 OR2D3Q8NGH3 330 aa8.73□□□□□ -1.01
TTC38-202ENST00000417709 CYTL1Q9NRR1 136 aa8.73□□□□□ -1.01
TTC38-202ENST00000417709 PFDN1O60925 122 aa8.72□□□□□ -1.01
TTC38-202ENST00000417709 GIPP09681 153 aaPredicted RBP8.72□□□□□ -1.01
TTC38-202ENST00000417709 NTF3P20783 257 aa8.72□□□□□ -1.01
TTC38-202ENST00000417709 RPL35P42766 123 aaKnown RBP8.72□□□□□ -1.01
TTC38-202ENST00000417709 XCL1P47992 114 aa8.72□□□□□ -1.01
TTC38-202ENST00000417709 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.71□□□□□ -1.02
TTC38-202ENST00000417709 IGKV2-29A2NJV5 120 aaPredicted RBP8.71□□□□□ -1.02
TTC38-202ENST00000417709 RPS20P60866 119 aaKnown RBP8.71□□□□□ -1.02
TTC38-202ENST00000417709 GAGE2BQ13066 116 aa8.71□□□□□ -1.02
TTC38-202ENST00000417709 LYZL1Q6UWQ5 148 aa8.71□□□□□ -1.02
TTC38-202ENST00000417709 FAM213BQ8TBF2 198 aa8.71□□□□□ -1.02
TTC38-202ENST00000417709 CARD19Q96LW7 228 aa8.71□□□□□ -1.02
TTC38-202ENST00000417709 KRTAP9-2Q9BYQ4 174 aa8.71□□□□□ -1.02
TTC38-202ENST00000417709 F2Z2F3 143 aa8.7□□□□□ -1.02
TTC38-202ENST00000417709 TRGC1P0CF51 173 aa8.7□□□□□ -1.02
TTC38-202ENST00000417709 KCNRGQ8N5I3 272 aa8.7□□□□□ -1.02
TTC38-202ENST00000417709 MBD3L1Q8WWY6 194 aa8.7□□□□□ -1.02
TTC38-202ENST00000417709 TRAV26-2A0A0B4J265 109 aa8.69□□□□□ -1.02
TTC38-202ENST00000417709 IGHV1-58A0A0C4DH39 117 aa8.69□□□□□ -1.02
TTC38-202ENST00000417709 A0A1W2PNN7 141 aa8.69□□□□□ -1.02
TTC38-202ENST00000417709 IFNA1P01562 189 aa8.69□□□□□ -1.02
TTC38-202ENST00000417709 MT-ND6P03923 174 aa8.69□□□□□ -1.02
TTC38-202ENST00000417709 FGF6P10767 208 aa8.69□□□□□ -1.02
TTC38-202ENST00000417709 SYCNQ0VAF6 134 aa8.69□□□□□ -1.02
TTC38-202ENST00000417709 Q6ZNX1 250 aa8.69□□□□□ -1.02
TTC38-202ENST00000417709 PRR26Q8N8Z3 221 aa8.69□□□□□ -1.02
TTC38-202ENST00000417709 GATD1Q8NB37 220 aa8.69□□□□□ -1.02
TTC38-202ENST00000417709 PSORS1C2Q9UIG4 136 aa8.69□□□□□ -1.02
TTC38-202ENST00000417709 PKIGQ9Y2B9 76 aa8.69□□□□□ -1.02
TTC38-202ENST00000417709 RAB19A4D1S5 217 aa8.68□□□□□ -1.02
TTC38-202ENST00000417709 ZNF561-AS1K7EIQ3 104 aa8.68□□□□□ -1.02
TTC38-202ENST00000417709 CCL25O15444 150 aa8.68□□□□□ -1.02
TTC38-202ENST00000417709 PTTG1IPP53801 180 aa8.68□□□□□ -1.02
TTC38-202ENST00000417709 TWIST1Q15672 202 aa8.68□□□□□ -1.02
TTC38-202ENST00000417709 ZNF664Q8N3J9 261 aa8.68□□□□□ -1.02
TTC38-202ENST00000417709 LINC00959A0A1B0GUT2 108 aa8.67□□□□□ -1.02
TTC38-202ENST00000417709 ARPC5O15511 151 aa8.67□□□□□ -1.02
TTC38-202ENST00000417709 CENPWQ5EE01 88 aa8.67□□□□□ -1.02
TTC38-202ENST00000417709 C1orf137Q5JT78 98 aa8.67□□□□□ -1.02
TTC38-202ENST00000417709 OR5A1Q8NGJ0 315 aa8.67□□□□□ -1.02
TTC38-202ENST00000417709 RPL39LQ96EH5 51 aaKnown RBP8.67□□□□□ -1.02
TTC38-202ENST00000417709 LOC107984640A0A0U1RRK4 108 aa8.66□□□□□ -1.02
TTC38-202ENST00000417709 XKRY2A2RUG3 117 aa8.66□□□□□ -1.02
TTC38-202ENST00000417709 C19orf71A6NCJ1 209 aa8.66□□□□□ -1.02
TTC38-202ENST00000417709 TMEM101Q96IK0 257 aa8.66□□□□□ -1.02
TTC38-202ENST00000417709 H7C423 109 aa8.65□□□□□ -1.02
TTC38-202ENST00000417709 APCSP02743 223 aa8.65□□□□□ -1.02
TTC38-202ENST00000417709 H2AFB1P0C5Y9 115 aa8.65□□□□□ -1.02
TTC38-202ENST00000417709 CCL20P78556 96 aa8.65□□□□□ -1.02
TTC38-202ENST00000417709 C9orf62Q8N4C0 152 aa8.65□□□□□ -1.02
TTC38-202ENST00000417709 BTF3L4Q96K17 158 aa8.65□□□□□ -1.02
TTC38-202ENST00000417709 NCR2O95944 276 aa8.64□□□□□ -1.03
TTC38-202ENST00000417709 BCL2P10415 239 aa8.64□□□□□ -1.03
TTC38-202ENST00000417709 PMCHP20382 165 aa8.64□□□□□ -1.03
TTC38-202ENST00000417709 FOXA3P55318 350 aaPredicted RBP8.64□□□□□ -1.03
TTC38-202ENST00000417709 SS18Q15532 418 aa8.64□□□□□ -1.03
TTC38-202ENST00000417709 PRR4Q16378 134 aa8.64□□□□□ -1.03
TTC38-202ENST00000417709 C9orf116Q5BN46 136 aaPredicted RBP8.64□□□□□ -1.03
TTC38-202ENST00000417709 PHF5AQ7RTV0 110 aaKnown RBP8.64□□□□□ -1.03
TTC38-202ENST00000417709 IGLV4-69A0A075B6H9 119 aa8.63□□□□□ -1.03
TTC38-202ENST00000417709 UMAD1C9J7I0 102 aa8.63□□□□□ -1.03
TTC38-202ENST00000417709 G3V3Q6 166 aa8.63□□□□□ -1.03
TTC38-202ENST00000417709 CAMPP49913 170 aa8.63□□□□□ -1.03
TTC38-202ENST00000417709 GNG4P50150 75 aa8.63□□□□□ -1.03
TTC38-202ENST00000417709 GNG13Q9P2W3 67 aa8.63□□□□□ -1.03
TTC38-202ENST00000417709 SDHAF1A6NFY7 115 aa8.62□□□□□ -1.03
TTC38-202ENST00000417709 CD164L2Q6UWJ8 174 aa8.62□□□□□ -1.03
TTC38-202ENST00000417709 NUDT10Q8NFP7 164 aa8.62□□□□□ -1.03
TTC38-202ENST00000417709 DIRC1Q969H9 104 aa8.62□□□□□ -1.03
TTC38-202ENST00000417709 ISOC2Q96AB3 205 aa8.62□□□□□ -1.03
TTC38-202ENST00000417709 NUDT11Q96G61 164 aa8.62□□□□□ -1.03
TTC38-202ENST00000417709 SMLR1H3BR10 107 aa8.61□□□□□ -1.03
TTC38-202ENST00000417709 I3L3M4 83 aa8.61□□□□□ -1.03
TTC38-202ENST00000417709 ZNF25P17030 456 aaPredicted RBP8.61□□□□□ -1.03
TTC38-202ENST00000417709 MALP21145 153 aa8.61□□□□□ -1.03
TTC38-202ENST00000417709 C11orf52Q96A22 123 aa8.61□□□□□ -1.03
TTC38-202ENST00000417709 OPRPNQ99935 248 aaPredicted RBP8.61□□□□□ -1.03
TTC38-202ENST00000417709 FAT4Q6V0I7 4981 aa8.61□□□□□ -1.03
TTC38-202ENST00000417709 NUP35Q8NFH5 326 aa8.6□□□□□ -1.03
TTC38-202ENST00000417709 CDC42SE2Q9NRR3 84 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms