RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 GNG4P50150 75 aa9.41□□□□□ -0.9
RPS28-201ENST00000417088 LYZL1Q6UWQ5 148 aa9.41□□□□□ -0.9
RPS28-201ENST00000417088 SMIM12Q96EX1 92 aa9.41□□□□□ -0.9
RPS28-201ENST00000417088 DPH3Q96FX2 82 aa9.41□□□□□ -0.9
RPS28-201ENST00000417088 RNF185Q96GF1 192 aa9.41□□□□□ -0.9
RPS28-201ENST00000417088 DPH3P1Q9H4G8 78 aa9.41□□□□□ -0.9
RPS28-201ENST00000417088 TRBV20OR9-2A0A075B6H5 130 aa9.4□□□□□ -0.9
RPS28-201ENST00000417088 XKRY2A2RUG3 117 aa9.4□□□□□ -0.9
RPS28-201ENST00000417088 IFNA1P01562 189 aa9.4□□□□□ -0.9
RPS28-201ENST00000417088 SPACA4Q8TDM5 124 aa9.4□□□□□ -0.9
RPS28-201ENST00000417088 UBE2L6O14933 153 aa9.39□□□□□ -0.91
RPS28-201ENST00000417088 AMTP48728 403 aa9.39□□□□□ -0.91
RPS28-201ENST00000417088 SULT1A2P50226 295 aa9.39□□□□□ -0.91
RPS28-201ENST00000417088 COTL1Q14019 142 aa9.39□□□□□ -0.91
RPS28-201ENST00000417088 C9orf62Q8N4C0 152 aa9.39□□□□□ -0.91
RPS28-201ENST00000417088 GAGE12HA6NDE8 117 aa9.38□□□□□ -0.91
RPS28-201ENST00000417088 MEF2BQ02080 365 aaPredicted RBP9.38□□□□□ -0.91
RPS28-201ENST00000417088 WDR73Q6P4I2 378 aa9.38□□□□□ -0.91
RPS28-201ENST00000417088 C15orf56Q8N910 161 aa9.38□□□□□ -0.91
RPS28-201ENST00000417088 MED9Q9NWA0 146 aa9.38□□□□□ -0.91
RPS28-201ENST00000417088 PLAC8Q9NZF1 115 aa9.38□□□□□ -0.91
RPS28-201ENST00000417088 PDE6DO43924 150 aa9.37□□□□□ -0.91
RPS28-201ENST00000417088 CTRLP40313 264 aa9.37□□□□□ -0.91
RPS28-201ENST00000417088 GATD1Q8NB37 220 aa9.37□□□□□ -0.91
RPS28-201ENST00000417088 NUDT10Q8NFP7 164 aa9.37□□□□□ -0.91
RPS28-201ENST00000417088 NUDT11Q96G61 164 aa9.37□□□□□ -0.91
RPS28-201ENST00000417088 BIN3Q9NQY0 253 aa9.37□□□□□ -0.91
RPS28-201ENST00000417088 TEX46H3BTG2 121 aa9.36□□□□□ -0.91
RPS28-201ENST00000417088 TWIST1Q15672 202 aa9.36□□□□□ -0.91
RPS28-201ENST00000417088 CFAP161Q6P656 301 aa9.36□□□□□ -0.91
RPS28-201ENST00000417088 CNFNQ9BYD5 112 aa9.36□□□□□ -0.91
RPS28-201ENST00000417088 TRAV26-2A0A0B4J265 109 aa9.35□□□□□ -0.91
RPS28-201ENST00000417088 IGKV3OR2-268A0A0C4DH90 116 aa9.35□□□□□ -0.91
RPS28-201ENST00000417088 PHOX2AO14813 284 aa9.35□□□□□ -0.91
RPS28-201ENST00000417088 RPS10P46783 165 aaKnown RBP9.35□□□□□ -0.91
RPS28-201ENST00000417088 COX6A2Q02221 97 aa9.35□□□□□ -0.91
RPS28-201ENST00000417088 TNXBP22105 4242 aa9.35□□□□□ -0.91
RPS28-201ENST00000417088 BCL2P10415 239 aa9.34□□□□□ -0.91
RPS28-201ENST00000417088 HIGD2BQ4VC39 106 aa9.34□□□□□ -0.91
RPS28-201ENST00000417088 EIF5AL1Q6IS14 154 aaKnown RBP9.34□□□□□ -0.91
RPS28-201ENST00000417088 Q6ZNX1 250 aa9.34□□□□□ -0.91
RPS28-201ENST00000417088 PRSS3P2Q8NHM4 247 aa9.34□□□□□ -0.91
RPS28-201ENST00000417088 NDUFS6O75380 124 aaKnown RBP9.33□□□□□ -0.92
RPS28-201ENST00000417088 C7orf33Q8WU49 177 aa9.33□□□□□ -0.92
RPS28-201ENST00000417088 CHCHD10Q8WYQ3 142 aaPredicted RBP9.33□□□□□ -0.92
RPS28-201ENST00000417088 RPL39LQ96EH5 51 aaKnown RBP9.33□□□□□ -0.92
RPS28-201ENST00000417088 RNASE7Q9H1E1 156 aaKnown RBP9.33□□□□□ -0.92
RPS28-201ENST00000417088 RPP21Q9H633 154 aaKnown RBP9.33□□□□□ -0.92
RPS28-201ENST00000417088 LRP2P98164 4655 aa9.32□□□□□ -0.92
RPS28-201ENST00000417088 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.32□□□□□ -0.92
RPS28-201ENST00000417088 IGKV2-29A2NJV5 120 aaPredicted RBP9.32□□□□□ -0.92
RPS28-201ENST00000417088 NCR2O95944 276 aa9.32□□□□□ -0.92
RPS28-201ENST00000417088 MAJINQ3KP22 176 aa9.32□□□□□ -0.92
RPS28-201ENST00000417088 AMMECR1LQ6DCA0 310 aa9.32□□□□□ -0.92
RPS28-201ENST00000417088 GVQW2A0A096LPI5 108 aaPredicted RBP9.31□□□□□ -0.92
RPS28-201ENST00000417088 IGKV2-24A0A0C4DH68 120 aa9.31□□□□□ -0.92
RPS28-201ENST00000417088 K7EN84 100 aa9.31□□□□□ -0.92
RPS28-201ENST00000417088 FOXA3P55318 350 aaPredicted RBP9.31□□□□□ -0.92
RPS28-201ENST00000417088 RNASEKQ6P5S7 137 aaKnown RBP9.31□□□□□ -0.92
RPS28-201ENST00000417088 OCC1Q8TAD7 63 aa9.31□□□□□ -0.92
RPS28-201ENST00000417088 H7C423 109 aa9.3□□□□□ -0.92
RPS28-201ENST00000417088 APCSP02743 223 aa9.3□□□□□ -0.92
RPS28-201ENST00000417088 FGF6P10767 208 aa9.3□□□□□ -0.92
RPS28-201ENST00000417088 FOXI1Q12951 378 aa9.3□□□□□ -0.92
RPS28-201ENST00000417088 GTSF1Q8WW33 167 aa9.3□□□□□ -0.92
RPS28-201ENST00000417088 SDHAF1A6NFY7 115 aa9.29□□□□□ -0.92
RPS28-201ENST00000417088 PRR3P79522 188 aaKnown RBP9.29□□□□□ -0.92
RPS28-201ENST00000417088 STPG4Q8N801 248 aa9.29□□□□□ -0.92
RPS28-201ENST00000417088 A0A096LNI7 61 aa9.28□□□□□ -0.92
RPS28-201ENST00000417088 TAGLN2P37802 199 aaKnown RBP9.28□□□□□ -0.92
RPS28-201ENST00000417088 SMIM15Q7Z3B0 74 aa9.28□□□□□ -0.92
RPS28-201ENST00000417088 OR5A1Q8NGJ0 315 aa9.28□□□□□ -0.92
RPS28-201ENST00000417088 LYPD6BQ8NI32 183 aa9.28□□□□□ -0.92
RPS28-201ENST00000417088 LINC01600Q96MT4 127 aa9.28□□□□□ -0.92
RPS28-201ENST00000417088 FAM231BA6NCW3 169 aa9.27□□□□□ -0.93
RPS28-201ENST00000417088 TEX261Q6UWH6 196 aa9.27□□□□□ -0.93
RPS28-201ENST00000417088 TRBV6-5A0A0K0K1A5 114 aa9.26□□□□□ -0.93
RPS28-201ENST00000417088 ZNF25P17030 456 aaPredicted RBP9.26□□□□□ -0.93
RPS28-201ENST00000417088 PMCHP20382 165 aa9.26□□□□□ -0.93
RPS28-201ENST00000417088 XCL1P47992 114 aa9.26□□□□□ -0.93
RPS28-201ENST00000417088 SLC51BQ86UW2 128 aa9.26□□□□□ -0.93
RPS28-201ENST00000417088 LINC00959A0A1B0GUT2 108 aa9.25□□□□□ -0.93
RPS28-201ENST00000417088 I3L3M4 83 aa9.25□□□□□ -0.93
RPS28-201ENST00000417088 CCL25O15444 150 aa9.25□□□□□ -0.93
RPS28-201ENST00000417088 GATCO43716 136 aaKnown RBP9.25□□□□□ -0.93
RPS28-201ENST00000417088 ESDP10768 282 aa9.25□□□□□ -0.93
RPS28-201ENST00000417088 LINC00526Q96FQ7 95 aa9.25□□□□□ -0.93
RPS28-201ENST00000417088 TMEM101Q96IK0 257 aa9.25□□□□□ -0.93
RPS28-201ENST00000417088 RNF213Q63HN8 5207 aa9.25□□□□□ -0.93
RPS28-201ENST00000417088 IGHV1-58A0A0C4DH39 117 aa9.24□□□□□ -0.93
RPS28-201ENST00000417088 GAS8-AS1O95177 125 aa9.24□□□□□ -0.93
RPS28-201ENST00000417088 TSHBP01222 138 aa9.24□□□□□ -0.93
RPS28-201ENST00000417088 ODF1Q14990 250 aa9.24□□□□□ -0.93
RPS28-201ENST00000417088 TCTE3Q8IZS6 198 aa9.24□□□□□ -0.93
RPS28-201ENST00000417088 BTF3L4Q96K17 158 aa9.24□□□□□ -0.93
RPS28-201ENST00000417088 LINC00474Q9P2X8 69 aa9.24□□□□□ -0.93
RPS28-201ENST00000417088 A8MWL6 223 aa9.23□□□□□ -0.93
RPS28-201ENST00000417088 FAM231DQ6ZW35 169 aa9.23□□□□□ -0.93
RPS28-201ENST00000417088 A0A0J9YXV3 536 aa9.22□□□□□ -0.93
RPS28-201ENST00000417088 TMEM250H0YL14 139 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms