RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 GTSF1Q8WW33 167 aa16.26■□□□□ 0.19
HLA-C-204ENST00000415537 CHAC1Q9BUX1 264 aa16.26■□□□□ 0.19
HLA-C-204ENST00000415537 EIF5A2Q9GZV4 153 aaKnown RBP16.26■□□□□ 0.19
HLA-C-204ENST00000415537 IGLV10-54A0A075B6I4 117 aa16.25■□□□□ 0.19
HLA-C-204ENST00000415537 TRAV26-2A0A0B4J265 109 aa16.25■□□□□ 0.19
HLA-C-204ENST00000415537 A8MWL6 223 aa16.25■□□□□ 0.19
HLA-C-204ENST00000415537 FAM231DQ6ZW35 169 aa16.25■□□□□ 0.19
HLA-C-204ENST00000415537 C20orf203Q8NBC4 194 aa16.25■□□□□ 0.19
HLA-C-204ENST00000415537 TRAV8-4A0A0B4J246 113 aa16.24■□□□□ 0.19
HLA-C-204ENST00000415537 IGLV4-60A0A075B6I1 120 aa16.23■□□□□ 0.19
HLA-C-204ENST00000415537 PRSS1P07477 247 aa16.23■□□□□ 0.19
HLA-C-204ENST00000415537 DGAT2L7PQ6IED9 249 aa16.23■□□□□ 0.19
HLA-C-204ENST00000415537 KRTAP26-1Q6PEX3 210 aa16.23■□□□□ 0.19
HLA-C-204ENST00000415537 TEX261Q6UWH6 196 aa16.22■□□□□ 0.19
HLA-C-204ENST00000415537 BORCS7Q96B45 105 aa16.22■□□□□ 0.19
HLA-C-204ENST00000415537 CLRN3Q8NCR9 226 aa16.21■□□□□ 0.19
HLA-C-204ENST00000415537 CIRBP-AS1Q8TBR5 109 aa16.21■□□□□ 0.19
HLA-C-204ENST00000415537 SMIM7Q9BQ49 75 aa16.21■□□□□ 0.19
HLA-C-204ENST00000415537 FLG2Q5D862 2391 aaPredicted RBP16.21■□□□□ 0.19
HLA-C-204ENST00000415537 FOXA3P55318 350 aaPredicted RBP16.2■□□□□ 0.18
HLA-C-204ENST00000415537 CT83Q5H943 113 aa16.19■□□□□ 0.18
HLA-C-204ENST00000415537 RPL39LQ96EH5 51 aaKnown RBP16.19■□□□□ 0.18
HLA-C-204ENST00000415537 NDUFS6O75380 124 aaKnown RBP16.18■□□□□ 0.18
HLA-C-204ENST00000415537 FAM210AQ96ND0 272 aa16.18■□□□□ 0.18
HLA-C-204ENST00000415537 GFRA4Q9GZZ7 299 aa16.18■□□□□ 0.18
HLA-C-204ENST00000415537 ZNF727A8MUV8 499 aa16.17■□□□□ 0.18
HLA-C-204ENST00000415537 NCR2O95944 276 aa16.17■□□□□ 0.18
HLA-C-204ENST00000415537 C9orf163Q8N9P6 203 aa16.17■□□□□ 0.18
HLA-C-204ENST00000415537 AMMECR1LQ6DCA0 310 aa16.16■□□□□ 0.18
HLA-C-204ENST00000415537 LINC01551Q86U37 167 aa16.16■□□□□ 0.18
HLA-C-204ENST00000415537 DMBT1Q9UGM3 2413 aaPredicted RBP16.16■□□□□ 0.18
HLA-C-204ENST00000415537 hDV102S1A0JD36 115 aa16.15■□□□□ 0.18
HLA-C-204ENST00000415537 SDHAF1A6NFY7 115 aa16.14■□□□□ 0.17
HLA-C-204ENST00000415537 APCSP02743 223 aa16.14■□□□□ 0.17
HLA-C-204ENST00000415537 TSKUQ8WUA8 353 aa16.14■□□□□ 0.17
HLA-C-204ENST00000415537 MYCBP2O75592 4640 aa16.13■□□□□ 0.17
HLA-C-204ENST00000415537 IGKV3OR2-268A0A0C4DH90 116 aa16.13■□□□□ 0.17
HLA-C-204ENST00000415537 HIGD1CA8MV81 97 aa16.13■□□□□ 0.17
HLA-C-204ENST00000415537 J3QL48 77 aa16.13■□□□□ 0.17
HLA-C-204ENST00000415537 SRP19P09132 144 aaKnown RBP16.13■□□□□ 0.17
HLA-C-204ENST00000415537 AP5S1Q9NUS5 200 aa16.13■□□□□ 0.17
HLA-C-204ENST00000415537 A0A1B0GUT8 65 aa16.12■□□□□ 0.17
HLA-C-204ENST00000415537 H7C423 109 aa16.12■□□□□ 0.17
HLA-C-204ENST00000415537 PMCHP20382 165 aa16.12■□□□□ 0.17
HLA-C-204ENST00000415537 RNASEKQ6P5S7 137 aaKnown RBP16.12■□□□□ 0.17
HLA-C-204ENST00000415537 OSTCQ9NRP0 149 aa16.12■□□□□ 0.17
HLA-C-204ENST00000415537 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.11■□□□□ 0.17
HLA-C-204ENST00000415537 IGKV2-29A2NJV5 120 aaPredicted RBP16.11■□□□□ 0.17
HLA-C-204ENST00000415537 I3L3M4 83 aa16.11■□□□□ 0.17
HLA-C-204ENST00000415537 HERC1Q15751 4861 aa16.11■□□□□ 0.17
HLA-C-204ENST00000415537 FAM231BA6NCW3 169 aa16.1■□□□□ 0.17
HLA-C-204ENST00000415537 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.09■□□□□ 0.17
HLA-C-204ENST00000415537 A0A1B0GVG6 124 aa16.09■□□□□ 0.17
HLA-C-204ENST00000415537 CNBPP62633 177 aaKnown RBP16.09■□□□□ 0.17
HLA-C-204ENST00000415537 TMEM191AQ9H0A3 160 aa16.09■□□□□ 0.17
HLA-C-204ENST00000415537 ST20Q9HBF5 79 aa16.09■□□□□ 0.17
HLA-C-204ENST00000415537 TRBV6-5A0A0K0K1A5 114 aa16.08■□□□□ 0.16
HLA-C-204ENST00000415537 GAGE12HA6NDE8 117 aa16.08■□□□□ 0.16
HLA-C-204ENST00000415537 CFAP161Q6P656 301 aa16.08■□□□□ 0.16
HLA-C-204ENST00000415537 FGF6P10767 208 aa16.07■□□□□ 0.16
HLA-C-204ENST00000415537 TMEM241Q24JQ0 296 aa16.07■□□□□ 0.16
HLA-C-204ENST00000415537 SDIM1Q6ZPB5 146 aa16.07■□□□□ 0.16
HLA-C-204ENST00000415537 BTF3L4Q96K17 158 aa16.07■□□□□ 0.16
HLA-C-204ENST00000415537 FAM74A3Q4VXF1 159 aa16.06■□□□□ 0.16
HLA-C-204ENST00000415537 TMEM101Q96IK0 257 aa16.06■□□□□ 0.16
HLA-C-204ENST00000415537 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.06■□□□□ 0.16
HLA-C-204ENST00000415537 IGHV3-64A0A075B6Q5 118 aa16.05■□□□□ 0.16
HLA-C-204ENST00000415537 ZNF25P17030 456 aaPredicted RBP16.05■□□□□ 0.16
HLA-C-204ENST00000415537 RIGQ13278 110 aa16.05■□□□□ 0.16
HLA-C-204ENST00000415537 MRAP2Q96G30 205 aa16.05■□□□□ 0.16
HLA-C-204ENST00000415537 GAS8-AS1O95177 125 aa16.04■□□□□ 0.16
HLA-C-204ENST00000415537 RAB4AP20338 218 aa16.04■□□□□ 0.16
HLA-C-204ENST00000415537 CHCHD10Q8WYQ3 142 aaPredicted RBP16.04■□□□□ 0.16
HLA-C-204ENST00000415537 ISOC2Q96AB3 205 aa16.04■□□□□ 0.16
HLA-C-204ENST00000415537 RNF185Q96GF1 192 aa16.04■□□□□ 0.16
HLA-C-204ENST00000415537 V9GYV3 84 aa16.04■□□□□ 0.16
HLA-C-204ENST00000415537 KRTAP10-4P60372 401 aaPredicted RBP16.03■□□□□ 0.16
HLA-C-204ENST00000415537 RPL37AP61513 92 aaKnown RBP16.03■□□□□ 0.16
HLA-C-204ENST00000415537 AMN1Q8IY45 258 aa16.03■□□□□ 0.16
HLA-C-204ENST00000415537 DPH3Q96FX2 82 aa16.03■□□□□ 0.16
HLA-C-204ENST00000415537 KRTAP29-1A8MX34 341 aaPredicted RBP16.02■□□□□ 0.16
HLA-C-204ENST00000415537 NUP35Q8NFH5 326 aa16.02■□□□□ 0.16
HLA-C-204ENST00000415537 TMEM242Q9NWH2 141 aa16.02■□□□□ 0.16
HLA-C-204ENST00000415537 TSHBP01222 138 aa16.01■□□□□ 0.15
HLA-C-204ENST00000415537 SLPIP03973 132 aa16.01■□□□□ 0.15
HLA-C-204ENST00000415537 RPL23P62829 140 aaKnown RBP16.01■□□□□ 0.15
HLA-C-204ENST00000415537 ADIRFQ15847 76 aa16.01■□□□□ 0.15
HLA-C-204ENST00000415537 C15orf56Q8N910 161 aa16.01■□□□□ 0.15
HLA-C-204ENST00000415537 OR5A1Q8NGJ0 315 aa16.01■□□□□ 0.15
HLA-C-204ENST00000415537 NAT8BQ9UHF3 227 aa16.01■□□□□ 0.15
HLA-C-204ENST00000415537 PANO1I0J062 215 aa16■□□□□ 0.15
HLA-C-204ENST00000415537 ESDP10768 282 aa16■□□□□ 0.15
HLA-C-204ENST00000415537 RPS10P46783 165 aaKnown RBP16■□□□□ 0.15
HLA-C-204ENST00000415537 POLR2KP53803 58 aaKnown RBP16■□□□□ 0.15
HLA-C-204ENST00000415537 PEA15Q15121 130 aa16■□□□□ 0.15
HLA-C-204ENST00000415537 NAT8Q9UHE5 227 aa16■□□□□ 0.15
HLA-C-204ENST00000415537 TRBV27A0A0K0K1C4 114 aa15.98■□□□□ 0.15
HLA-C-204ENST00000415537 PPP1R17O96001 155 aa15.98■□□□□ 0.15
HLA-C-204ENST00000415537 HIGD2BQ4VC39 106 aa15.98■□□□□ 0.15
HLA-C-204ENST00000415537 C7orf77A4D0Y5 90 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms