RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 IGHV3-30-5P0DP03 117 aa12.2□□□□□ -0.46
NUP50-203ENST00000407019 FAM104AQ969W3 186 aa12.2□□□□□ -0.46
NUP50-203ENST00000407019 CHCHD7Q9BUK0 85 aa12.2□□□□□ -0.46
NUP50-203ENST00000407019 F8W1H4 67 aa12.2□□□□□ -0.46
NUP50-203ENST00000407019 APCP25054 2843 aa12.19□□□□□ -0.46
NUP50-203ENST00000407019 IGHV3-64A0A075B6Q5 118 aa12.19□□□□□ -0.46
NUP50-203ENST00000407019 H3BMG7 143 aa12.19□□□□□ -0.46
NUP50-203ENST00000407019 CEMP1Q6PRD7 247 aaPredicted RBP12.19□□□□□ -0.46
NUP50-203ENST00000407019 CITED2Q99967 270 aaPredicted RBP12.19□□□□□ -0.46
NUP50-203ENST00000407019 SPANXA1Q9NS26 97 aa12.19□□□□□ -0.46
NUP50-203ENST00000407019 APOMO95445 188 aa12.18□□□□□ -0.46
NUP50-203ENST00000407019 AZU1P20160 251 aa12.18□□□□□ -0.46
NUP50-203ENST00000407019 MRPS36P82909 103 aaKnown RBP12.18□□□□□ -0.46
NUP50-203ENST00000407019 C1orf158Q8N1D5 194 aa12.18□□□□□ -0.46
NUP50-203ENST00000407019 NACAE9PAV3 2078 aa12.18□□□□□ -0.46
NUP50-203ENST00000407019 IGHV3OR16-12A0A075B7B8 117 aa12.18□□□□□ -0.46
NUP50-203ENST00000407019 UBE2D4Q9Y2X8 147 aa12.18□□□□□ -0.46
NUP50-203ENST00000407019 TSSC4Q9Y5U2 329 aaPredicted RBP12.18□□□□□ -0.46
NUP50-203ENST00000407019 TSPAN13O95857 204 aa12.17□□□□□ -0.46
NUP50-203ENST00000407019 RPL24P83731 157 aaKnown RBP12.17□□□□□ -0.46
NUP50-203ENST00000407019 KRTAP1-1Q07627 177 aa12.17□□□□□ -0.46
NUP50-203ENST00000407019 COTL1Q14019 142 aa12.17□□□□□ -0.46
NUP50-203ENST00000407019 NDUFA11Q86Y39 141 aa12.17□□□□□ -0.46
NUP50-203ENST00000407019 YAE1D1Q9NRH1 226 aa12.17□□□□□ -0.46
NUP50-203ENST00000407019 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.17□□□□□ -0.46
NUP50-203ENST00000407019 IGKV2-29A2NJV5 120 aaPredicted RBP12.17□□□□□ -0.46
NUP50-203ENST00000407019 IL17DQ8TAD2 202 aa12.17□□□□□ -0.46
NUP50-203ENST00000407019 IGHV3-38A0A0C4DH36 116 aa12.16□□□□□ -0.46
NUP50-203ENST00000407019 RNASE13Q5GAN3 156 aaKnown RBP12.16□□□□□ -0.46
NUP50-203ENST00000407019 RNASE1P07998 156 aaKnown RBP12.15□□□□□ -0.46
NUP50-203ENST00000407019 WFDC2Q14508 124 aa12.15□□□□□ -0.46
NUP50-203ENST00000407019 C21orf62-AS1Q17RA5 79 aa12.15□□□□□ -0.46
NUP50-203ENST00000407019 LINC01006Q8NI28 216 aa12.15□□□□□ -0.46
NUP50-203ENST00000407019 TIMM21Q9BVV7 248 aa12.15□□□□□ -0.46
NUP50-203ENST00000407019 C16orf95Q9H693 158 aa12.15□□□□□ -0.46
NUP50-203ENST00000407019 ITPR3Q14573 2671 aa12.15□□□□□ -0.46
NUP50-203ENST00000407019 TEX48A0A1B0GUV7 120 aa12.15□□□□□ -0.46
NUP50-203ENST00000407019 GAGE13Q4V321 117 aa12.15□□□□□ -0.46
NUP50-203ENST00000407019 MYO9AB2RTY4 2548 aa12.15□□□□□ -0.46
NUP50-203ENST00000407019 TRGV1A0A0A0MS02 117 aa12.14□□□□□ -0.47
NUP50-203ENST00000407019 CFC1BP0CG36 223 aa12.14□□□□□ -0.47
NUP50-203ENST00000407019 CFC1P0CG37 223 aa12.14□□□□□ -0.47
NUP50-203ENST00000407019 IGHV3-30-3P0DP02 117 aa12.14□□□□□ -0.47
NUP50-203ENST00000407019 ZNF469Q96JG9 3925 aaPredicted RBP12.14□□□□□ -0.47
NUP50-203ENST00000407019 TINCRA0A1B0GVN0 87 aa12.14□□□□□ -0.47
NUP50-203ENST00000407019 Q6ZUT4 128 aa12.14□□□□□ -0.47
NUP50-203ENST00000407019 C10orf126Q8N4M7 172 aa12.14□□□□□ -0.47
NUP50-203ENST00000407019 TMEM238C9JI98 176 aa12.13□□□□□ -0.47
NUP50-203ENST00000407019 LYRM7Q5U5X0 104 aa12.13□□□□□ -0.47
NUP50-203ENST00000407019 PRO0461Q9UI25 63 aa12.13□□□□□ -0.47
NUP50-203ENST00000407019 LOC107984156A0A0G2JMH3 177 aa12.12□□□□□ -0.47
NUP50-203ENST00000407019 CMC4P56277 68 aaPredicted RBP12.12□□□□□ -0.47
NUP50-203ENST00000407019 ARL17AQ8IVW1 177 aa12.12□□□□□ -0.47
NUP50-203ENST00000407019 EPG5Q9HCE0 2579 aa12.12□□□□□ -0.47
NUP50-203ENST00000407019 IGHV1-58A0A0C4DH39 117 aa12.12□□□□□ -0.47
NUP50-203ENST00000407019 A0A0J9YXY3 114 aa12.12□□□□□ -0.47
NUP50-203ENST00000407019 UBE2D3P61077 147 aa12.12□□□□□ -0.47
NUP50-203ENST00000407019 UBE2D2P62837 147 aa12.12□□□□□ -0.47
NUP50-203ENST00000407019 TMEM263Q8WUH6 116 aaKnown RBP12.12□□□□□ -0.47
NUP50-203ENST00000407019 MTURNQ8N3F0 131 aa12.11□□□□□ -0.47
NUP50-203ENST00000407019 PRO1854Q9UHT4 67 aa12.11□□□□□ -0.47
NUP50-203ENST00000407019 TRAV8-3A0A0A6YYJ7 113 aa12.1□□□□□ -0.47
NUP50-203ENST00000407019 A4D1N5 150 aa12.1□□□□□ -0.47
NUP50-203ENST00000407019 SFTA2Q6UW10 78 aa12.1□□□□□ -0.47
NUP50-203ENST00000407019 AKAP9Q99996 3911 aa12.1□□□□□ -0.47
NUP50-203ENST00000407019 TLN2Q9Y4G6 2542 aa12.1□□□□□ -0.47
NUP50-203ENST00000407019 PSMB2P49721 201 aa12.09□□□□□ -0.47
NUP50-203ENST00000407019 Q6ZTI0 123 aa12.09□□□□□ -0.47
NUP50-203ENST00000407019 TRAV4A0A0B4J268 109 aa12.09□□□□□ -0.47
NUP50-203ENST00000407019 K7EQD1 137 aa12.09□□□□□ -0.47
NUP50-203ENST00000407019 ETDBQ3ZM63 59 aa12.09□□□□□ -0.47
NUP50-203ENST00000407019 MUSTN1Q8IVN3 82 aa12.09□□□□□ -0.47
NUP50-203ENST00000407019 VSIG2Q96IQ7 327 aa12.09□□□□□ -0.47
NUP50-203ENST00000407019 GEMIN7Q9H840 131 aaKnown RBP12.09□□□□□ -0.47
NUP50-203ENST00000407019 SONP18583 2426 aaKnown RBP12.08□□□□□ -0.48
NUP50-203ENST00000407019 TRBV10-1A0A0K0K1A3 114 aa12.08□□□□□ -0.48
NUP50-203ENST00000407019 ADARB2-AS1A8MUL3 147 aa12.08□□□□□ -0.48
NUP50-203ENST00000407019 RPL36AP83881 106 aaKnown RBP12.08□□□□□ -0.48
NUP50-203ENST00000407019 SH2D6Q7Z4S9 175 aa12.08□□□□□ -0.48
NUP50-203ENST00000407019 RPL36ALQ969Q0 106 aaKnown RBP12.08□□□□□ -0.48
NUP50-203ENST00000407019 A0A0B4J2C4 111 aa12.07□□□□□ -0.48
NUP50-203ENST00000407019 SPINK8P0C7L1 97 aa12.07□□□□□ -0.48
NUP50-203ENST00000407019 DGAT2L7PQ6IED9 249 aa12.07□□□□□ -0.48
NUP50-203ENST00000407019 ZNF418Q8TF45 676 aaPredicted RBP12.07□□□□□ -0.48
NUP50-203ENST00000407019 NDUFA12Q9UI09 145 aa12.07□□□□□ -0.48
NUP50-203ENST00000407019 J3QR89 54 aa12.07□□□□□ -0.48
NUP50-203ENST00000407019 IGLV1-51P01701 117 aa12.07□□□□□ -0.48
NUP50-203ENST00000407019 PLA2G2AP14555 144 aa12.07□□□□□ -0.48
NUP50-203ENST00000407019 FAM110AQ9BQ89 295 aa12.07□□□□□ -0.48
NUP50-203ENST00000407019 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.06□□□□□ -0.48
NUP50-203ENST00000407019 GIG44P09565 113 aaPredicted RBP12.06□□□□□ -0.48
NUP50-203ENST00000407019 LITAFQ99732 161 aa12.06□□□□□ -0.48
NUP50-203ENST00000407019 TRBV20-1A0A075B6N2 111 aa12.06□□□□□ -0.48
NUP50-203ENST00000407019 J3QKU1 62 aa12.06□□□□□ -0.48
NUP50-203ENST00000407019 TIRAPP58753 221 aa12.06□□□□□ -0.48
NUP50-203ENST00000407019 WFDC10AQ9H1F0 79 aa12.06□□□□□ -0.48
NUP50-203ENST00000407019 NOP10Q9NPE3 64 aaKnown RBP12.06□□□□□ -0.48
NUP50-203ENST00000407019 FLNAP21333 2647 aaKnown RBP12.05□□□□□ -0.48
NUP50-203ENST00000407019 EIF4EBP3O60516 100 aaPredicted RBP12.05□□□□□ -0.48
NUP50-203ENST00000407019 HILS1P60008 231 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 174.7 ms