RNA–Protein interactions for RNA: ENST00000405375.5

CDKN1A-203, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-203ENST00000405375 VCX2Q9H322 139 aa11.77□□□□□ -0.52
CDKN1A-203ENST00000405375 RHODO00212 210 aa11.77□□□□□ -0.53
CDKN1A-203ENST00000405375 ZNF22P17026 224 aaPredicted RBP11.77□□□□□ -0.53
CDKN1A-203ENST00000405375 UBE2D1P51668 147 aa11.77□□□□□ -0.53
CDKN1A-203ENST00000405375 RNF151Q2KHN1 245 aa11.77□□□□□ -0.53
CDKN1A-203ENST00000405375 MRPL16Q9NX20 251 aaKnown RBP11.77□□□□□ -0.53
CDKN1A-203ENST00000405375 XCL2Q9UBD3 114 aa11.77□□□□□ -0.53
CDKN1A-203ENST00000405375 SAP30O75446 220 aa11.76□□□□□ -0.53
CDKN1A-203ENST00000405375 IGHV3-53P01767 116 aa11.76□□□□□ -0.53
CDKN1A-203ENST00000405375 SPANXB1Q9NS25 103 aaPredicted RBP11.76□□□□□ -0.53
CDKN1A-203ENST00000405375 ACANP16112 2415 aa11.76□□□□□ -0.53
CDKN1A-203ENST00000405375 A0A0J9YXV3 536 aa11.76□□□□□ -0.53
CDKN1A-203ENST00000405375 TMEM238LA0A1B0GVL6 79 aa11.76□□□□□ -0.53
CDKN1A-203ENST00000405375 A6NJY4 79 aa11.76□□□□□ -0.53
CDKN1A-203ENST00000405375 SLC25A29Q8N8R3 303 aa11.76□□□□□ -0.53
CDKN1A-203ENST00000405375 CITED2Q99967 270 aaPredicted RBP11.76□□□□□ -0.53
CDKN1A-203ENST00000405375 ITPR2Q14571 2701 aa11.76□□□□□ -0.53
CDKN1A-203ENST00000405375 RS1O15537 224 aa11.75□□□□□ -0.53
CDKN1A-203ENST00000405375 AZU1P20160 251 aa11.75□□□□□ -0.53
CDKN1A-203ENST00000405375 CRYBA4P53673 196 aa11.75□□□□□ -0.53
CDKN1A-203ENST00000405375 CHCHD7Q9BUK0 85 aa11.75□□□□□ -0.53
CDKN1A-203ENST00000405375 LEPROTO15243 131 aa11.75□□□□□ -0.53
CDKN1A-203ENST00000405375 STHQ8IWL8 128 aa11.75□□□□□ -0.53
CDKN1A-203ENST00000405375 C1orf158Q8N1D5 194 aa11.75□□□□□ -0.53
CDKN1A-203ENST00000405375 LINC01006Q8NI28 216 aa11.74□□□□□ -0.53
CDKN1A-203ENST00000405375 LGALS3P17931 250 aaKnown RBP11.74□□□□□ -0.53
CDKN1A-203ENST00000405375 CEMP1Q6PRD7 247 aaPredicted RBP11.74□□□□□ -0.53
CDKN1A-203ENST00000405375 IL17DQ8TAD2 202 aa11.74□□□□□ -0.53
CDKN1A-203ENST00000405375 DNAJC30Q96LL9 226 aa11.74□□□□□ -0.53
CDKN1A-203ENST00000405375 IGHV3-30P01768 117 aa11.73□□□□□ -0.53
CDKN1A-203ENST00000405375 RNASE1P07998 156 aaKnown RBP11.73□□□□□ -0.53
CDKN1A-203ENST00000405375 IGHV3-30-5P0DP03 117 aa11.73□□□□□ -0.53
CDKN1A-203ENST00000405375 MRPS36P82909 103 aaKnown RBP11.73□□□□□ -0.53
CDKN1A-203ENST00000405375 C16orf95Q9H693 158 aa11.73□□□□□ -0.53
CDKN1A-203ENST00000405375 TSSC4Q9Y5U2 329 aaPredicted RBP11.73□□□□□ -0.53
CDKN1A-203ENST00000405375 SETD2Q9BYW2 2564 aaPredicted RBP11.73□□□□□ -0.53
CDKN1A-203ENST00000405375 YAE1D1Q9NRH1 226 aa11.72□□□□□ -0.53
CDKN1A-203ENST00000405375 PGPEP1Q9NXJ5 209 aa11.72□□□□□ -0.53
CDKN1A-203ENST00000405375 UBE2D4Q9Y2X8 147 aa11.72□□□□□ -0.53
CDKN1A-203ENST00000405375 MTORP42345 2549 aa11.72□□□□□ -0.53
CDKN1A-203ENST00000405375 C21orf62-AS1Q17RA5 79 aa11.71□□□□□ -0.53
CDKN1A-203ENST00000405375 SPANXA1Q9NS26 97 aa11.71□□□□□ -0.53
CDKN1A-203ENST00000405375 COTL1Q14019 142 aa11.71□□□□□ -0.54
CDKN1A-203ENST00000405375 H3BMG7 143 aa11.7□□□□□ -0.54
CDKN1A-203ENST00000405375 VPS25Q9BRG1 176 aa11.7□□□□□ -0.54
CDKN1A-203ENST00000405375 UNC79Q9P2D8 2635 aa11.7□□□□□ -0.54
CDKN1A-203ENST00000405375 IGHV3-64A0A075B6Q5 118 aa11.7□□□□□ -0.54
CDKN1A-203ENST00000405375 IGHV3OR16-12A0A075B7B8 117 aa11.7□□□□□ -0.54
CDKN1A-203ENST00000405375 G3V4G9 280 aa11.7□□□□□ -0.54
CDKN1A-203ENST00000405375 F8W1H4 67 aa11.69□□□□□ -0.54
CDKN1A-203ENST00000405375 NDUFA11Q86Y39 141 aa11.69□□□□□ -0.54
CDKN1A-203ENST00000405375 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.69□□□□□ -0.54
CDKN1A-203ENST00000405375 IGHV3-38A0A0C4DH36 116 aa11.69□□□□□ -0.54
CDKN1A-203ENST00000405375 IGKV2-29A2NJV5 120 aaPredicted RBP11.69□□□□□ -0.54
CDKN1A-203ENST00000405375 RNASE13Q5GAN3 156 aaKnown RBP11.69□□□□□ -0.54
CDKN1A-203ENST00000405375 ANK3Q12955 4377 aaKnown RBP11.68□□□□□ -0.54
CDKN1A-203ENST00000405375 TSPAN13O95857 204 aa11.68□□□□□ -0.54
CDKN1A-203ENST00000405375 C10orf126Q8N4M7 172 aa11.68□□□□□ -0.54
CDKN1A-203ENST00000405375 APOMO95445 188 aa11.67□□□□□ -0.54
CDKN1A-203ENST00000405375 CFC1BP0CG36 223 aa11.67□□□□□ -0.54
CDKN1A-203ENST00000405375 CFC1P0CG37 223 aa11.67□□□□□ -0.54
CDKN1A-203ENST00000405375 IGHV3-30-3P0DP02 117 aa11.67□□□□□ -0.54
CDKN1A-203ENST00000405375 TRGV1A0A0A0MS02 117 aa11.67□□□□□ -0.54
CDKN1A-203ENST00000405375 GIG44P09565 113 aaPredicted RBP11.67□□□□□ -0.54
CDKN1A-203ENST00000405375 PRO0461Q9UI25 63 aa11.67□□□□□ -0.54
CDKN1A-203ENST00000405375 TINCRA0A1B0GVN0 87 aa11.66□□□□□ -0.54
CDKN1A-203ENST00000405375 WFDC2Q14508 124 aa11.66□□□□□ -0.54
CDKN1A-203ENST00000405375 Q6ZUT4 128 aa11.66□□□□□ -0.54
CDKN1A-203ENST00000405375 TMEM263Q8WUH6 116 aaKnown RBP11.66□□□□□ -0.54
CDKN1A-203ENST00000405375 GCN1Q92616 2671 aaKnown RBP11.66□□□□□ -0.54
CDKN1A-203ENST00000405375 JMJD1CQ15652 2540 aa11.66□□□□□ -0.54
CDKN1A-203ENST00000405375 TIMM21Q9BVV7 248 aa11.66□□□□□ -0.54
CDKN1A-203ENST00000405375 TEX48A0A1B0GUV7 120 aa11.65□□□□□ -0.54
CDKN1A-203ENST00000405375 ADARB2-AS1A8MUL3 147 aa11.65□□□□□ -0.54
CDKN1A-203ENST00000405375 IGLV1-51P01701 117 aa11.65□□□□□ -0.54
CDKN1A-203ENST00000405375 UBE2D3P61077 147 aa11.65□□□□□ -0.54
CDKN1A-203ENST00000405375 UBE2D2P62837 147 aa11.65□□□□□ -0.54
CDKN1A-203ENST00000405375 Q6ZTI0 123 aa11.65□□□□□ -0.54
CDKN1A-203ENST00000405375 NOTCH3Q9UM47 2321 aa11.65□□□□□ -0.54
CDKN1A-203ENST00000405375 SETXQ7Z333 2677 aaKnown RBP11.65□□□□□ -0.54
CDKN1A-203ENST00000405375 TRAV8-3A0A0A6YYJ7 113 aa11.65□□□□□ -0.55
CDKN1A-203ENST00000405375 IGHV1-58A0A0C4DH39 117 aa11.65□□□□□ -0.55
CDKN1A-203ENST00000405375 CMC4P56277 68 aaPredicted RBP11.65□□□□□ -0.55
CDKN1A-203ENST00000405375 FAM110AQ9BQ89 295 aa11.65□□□□□ -0.55
CDKN1A-203ENST00000405375 C19orf73Q9NVV2 129 aa11.65□□□□□ -0.55
CDKN1A-203ENST00000405375 A0A0J9YXY3 114 aa11.64□□□□□ -0.55
CDKN1A-203ENST00000405375 RPL24P83731 157 aaKnown RBP11.64□□□□□ -0.55
CDKN1A-203ENST00000405375 NIPBLQ6KC79 2804 aaeCLIP11.64□□□□□ -0.55
CDKN1A-203ENST00000405375 HILS1P60008 231 aa11.63□□□□□ -0.55
CDKN1A-203ENST00000405375 GAGE13Q4V321 117 aa11.63□□□□□ -0.55
CDKN1A-203ENST00000405375 WFDC10AQ9H1F0 79 aa11.63□□□□□ -0.55
CDKN1A-203ENST00000405375 TRBV10-1A0A0K0K1A3 114 aa11.62□□□□□ -0.55
CDKN1A-203ENST00000405375 A4D1N5 150 aa11.62□□□□□ -0.55
CDKN1A-203ENST00000405375 TMEM238C9JI98 176 aa11.62□□□□□ -0.55
CDKN1A-203ENST00000405375 VSIG2Q96IQ7 327 aa11.62□□□□□ -0.55
CDKN1A-203ENST00000405375 HECTD1Q9ULT8 2610 aa11.62□□□□□ -0.55
CDKN1A-203ENST00000405375 TRAV4A0A0B4J268 109 aa11.62□□□□□ -0.55
CDKN1A-203ENST00000405375 K7EQD1 137 aa11.62□□□□□ -0.55
CDKN1A-203ENST00000405375 EIF4EBP3O60516 100 aaPredicted RBP11.62□□□□□ -0.55
CDKN1A-203ENST00000405375 LITAFQ99732 161 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms