RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 TMEM97Q5BJF2 176 aa15.27■□□□□ 0.04
EPCAM-202ENST00000405271 IGHV3-38A0A0C4DH36 116 aa15.27■□□□□ 0.03
EPCAM-202ENST00000405271 SERF1AO75920 110 aa15.27■□□□□ 0.03
EPCAM-202ENST00000405271 S100A6P06703 90 aa15.27■□□□□ 0.03
EPCAM-202ENST00000405271 COTL1Q14019 142 aa15.27■□□□□ 0.03
EPCAM-202ENST00000405271 TMA7Q9Y2S6 64 aaKnown RBP15.27■□□□□ 0.03
EPCAM-202ENST00000405271 TSHBP01222 138 aa15.26■□□□□ 0.03
EPCAM-202ENST00000405271 FCER1GP30273 86 aa15.26■□□□□ 0.03
EPCAM-202ENST00000405271 GTSF1LQ9H1H1 148 aa15.26■□□□□ 0.03
EPCAM-202ENST00000405271 LINC00310P59036 64 aa15.25■□□□□ 0.03
EPCAM-202ENST00000405271 ORMDL2Q53FV1 153 aa15.25■□□□□ 0.03
EPCAM-202ENST00000405271 CEMP1Q6PRD7 247 aaPredicted RBP15.25■□□□□ 0.03
EPCAM-202ENST00000405271 NUDT3O95989 172 aa15.24■□□□□ 0.03
EPCAM-202ENST00000405271 LAGE3Q14657 143 aa15.24■□□□□ 0.03
EPCAM-202ENST00000405271 IGLL5B9A064 214 aa15.23■□□□□ 0.03
EPCAM-202ENST00000405271 HSBP1O75506 76 aa15.23■□□□□ 0.03
EPCAM-202ENST00000405271 ESDP10768 282 aa15.23■□□□□ 0.03
EPCAM-202ENST00000405271 KLK5Q9Y337 293 aaPredicted RBP15.22■□□□□ 0.03
EPCAM-202ENST00000405271 TIRAPP58753 221 aa15.21■□□□□ 0.03
EPCAM-202ENST00000405271 DYNC2H1Q8NCM8 4307 aaKnown RBP15.21■□□□□ 0.02
EPCAM-202ENST00000405271 TRBV25-1A0A075B6N4 114 aa15.2■□□□□ 0.02
EPCAM-202ENST00000405271 IGHV1-24A0A0C4DH33 117 aa15.2■□□□□ 0.02
EPCAM-202ENST00000405271 G0S2P27469 103 aa15.2■□□□□ 0.02
EPCAM-202ENST00000405271 AMTP48728 403 aa15.2■□□□□ 0.02
EPCAM-202ENST00000405271 NTM-AS1Q6ZSK4 140 aa15.2■□□□□ 0.02
EPCAM-202ENST00000405271 DEFB104AQ8WTQ1 72 aa15.2■□□□□ 0.02
EPCAM-202ENST00000405271 TRBV6-8A0A0A6YYG3 113 aa15.19■□□□□ 0.02
EPCAM-202ENST00000405271 TCTAP57738 103 aa15.19■□□□□ 0.02
EPCAM-202ENST00000405271 NUPR1O60356 82 aa15.18■□□□□ 0.02
EPCAM-202ENST00000405271 CHCHD7Q9BUK0 85 aa15.18■□□□□ 0.02
EPCAM-202ENST00000405271 HBDP02042 147 aa15.17■□□□□ 0.02
EPCAM-202ENST00000405271 LYSTQ99698 3801 aa15.17■□□□□ 0.02
EPCAM-202ENST00000405271 SACSQ9NZJ4 4579 aa15.17■□□□□ 0.02
EPCAM-202ENST00000405271 LINC01549A6NIU2 74 aa15.17■□□□□ 0.02
EPCAM-202ENST00000405271 LYPD5Q6UWN5 251 aa15.17■□□□□ 0.02
EPCAM-202ENST00000405271 C20orf203Q8NBC4 194 aa15.17■□□□□ 0.02
EPCAM-202ENST00000405271 TMEM18Q96B42 140 aa15.17■□□□□ 0.02
EPCAM-202ENST00000405271 TMEM243Q9BU79 118 aa15.17■□□□□ 0.02
EPCAM-202ENST00000405271 LCE6AA0A183 80 aa15.16■□□□□ 0.02
EPCAM-202ENST00000405271 C5orf52A6NGY3 159 aa15.16■□□□□ 0.02
EPCAM-202ENST00000405271 BTF3P20290 206 aaKnown RBP15.16■□□□□ 0.02
EPCAM-202ENST00000405271 LELP1Q5T871 98 aa15.16■□□□□ 0.02
EPCAM-202ENST00000405271 A0A096LNJ9 63 aa15.15■□□□□ 0.02
EPCAM-202ENST00000405271 SNRPEP62304 92 aaKnown RBP15.15■□□□□ 0.02
EPCAM-202ENST00000405271 PMCHL1Q16048 86 aa15.15■□□□□ 0.02
EPCAM-202ENST00000405271 C2orf66Q6UXQ4 117 aa15.15■□□□□ 0.02
EPCAM-202ENST00000405271 APLNQ9ULZ1 77 aa15.15■□□□□ 0.02
EPCAM-202ENST00000405271 CYSLTR1Q9Y271 337 aa15.15■□□□□ 0.02
EPCAM-202ENST00000405271 FAM19A2Q8N3H0 131 aa15.14■□□□□ 0.01
EPCAM-202ENST00000405271 H7C423 109 aa15.13■□□□□ 0.01
EPCAM-202ENST00000405271 HIST3H2BBQ8N257 126 aa15.13■□□□□ 0.01
EPCAM-202ENST00000405271 TOMM6Q96B49 74 aa15.13■□□□□ 0.01
EPCAM-202ENST00000405271 UBE2L6O14933 153 aa15.12■□□□□ 0.01
EPCAM-202ENST00000405271 SMAGPQ0VAQ4 97 aa15.12■□□□□ 0.01
EPCAM-202ENST00000405271 ESRGQ1W209 222 aa15.12■□□□□ 0.01
EPCAM-202ENST00000405271 PDZD11Q5EBL8 140 aa15.12■□□□□ 0.01
EPCAM-202ENST00000405271 PACRGQ96M98 296 aaPredicted RBP15.12■□□□□ 0.01
EPCAM-202ENST00000405271 RYR2Q92736 4967 aa15.11■□□□□ 0.01
EPCAM-202ENST00000405271 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.11■□□□□ 0.01
EPCAM-202ENST00000405271 IGKV2-29A2NJV5 120 aaPredicted RBP15.11■□□□□ 0.01
EPCAM-202ENST00000405271 S100A2P29034 98 aa15.11■□□□□ 0.01
EPCAM-202ENST00000405271 CHCHD5Q9BSY4 110 aa15.11■□□□□ 0.01
EPCAM-202ENST00000405271 TRAV8-6A0A0B4J262 113 aa15.1■□□□□ 0.01
EPCAM-202ENST00000405271 CCL18P55774 89 aa15.1■□□□□ 0.01
EPCAM-202ENST00000405271 PKIAP61925 76 aa15.1■□□□□ 0.01
EPCAM-202ENST00000405271 RPL39P62891 51 aaKnown RBP15.1■□□□□ 0.01
EPCAM-202ENST00000405271 PLECQ15149 4684 aaKnown RBP15.1■□□□□ 0.01
EPCAM-202ENST00000405271 LEPROTL1O95214 131 aa15.08■□□□□ 0.01
EPCAM-202ENST00000405271 MRPL52Q86TS9 123 aaKnown RBP15.08■□□□□ 0.01
EPCAM-202ENST00000405271 TIMM21Q9BVV7 248 aa15.08■□□□□ 0.01
EPCAM-202ENST00000405271 SPANXA1Q9NS26 97 aa15.08■□□□□ 0.01
EPCAM-202ENST00000405271 ZNF25P17030 456 aaPredicted RBP15.07■□□□□ 0
EPCAM-202ENST00000405271 UBE2D4Q9Y2X8 147 aa15.07■□□□□ 0
EPCAM-202ENST00000405271 MRPS16Q9Y3D3 137 aaKnown RBP15.07■□□□□ 0
EPCAM-202ENST00000405271 PYGO1Q9Y3Y4 419 aa15.07■□□□□ 0
EPCAM-202ENST00000405271 ERASQ7Z444 233 aa15.07■□□□□ 0
EPCAM-202ENST00000405271 TIMM17AQ99595 171 aa15.07■□□□□ 0
EPCAM-202ENST00000405271 ATP5LO75964 103 aa15.06■□□□□ 0
EPCAM-202ENST00000405271 NPSP0C0P6 89 aa15.06■□□□□ 0
EPCAM-202ENST00000405271 FGF6P10767 208 aa15.06■□□□□ 0
EPCAM-202ENST00000405271 GAGE6Q13070 117 aa15.06■□□□□ 0
EPCAM-202ENST00000405271 AMMECR1LQ6DCA0 310 aa15.06■□□□□ 0
EPCAM-202ENST00000405271 SCGB3A1Q96QR1 104 aa15.06■□□□□ 0
EPCAM-202ENST00000405271 HSPB8Q9UJY1 196 aa15.06■□□□□ 0
EPCAM-202ENST00000405271 LINC00588Q9Y4M8 146 aa15.06■□□□□ 0
EPCAM-202ENST00000405271 CSDC2Q9Y534 153 aaKnown RBP15.06■□□□□ 0
EPCAM-202ENST00000405271 HIST1H2BLQ99880 126 aa15.05■□□□□ -0
EPCAM-202ENST00000405271 UPK3BQ9BT76 320 aa15.05■□□□□ -0
EPCAM-202ENST00000405271 DNAH1Q9P2D7 4330 aa15.04■□□□□ -0
EPCAM-202ENST00000405271 IGIPA6NJ69 53 aa15.04■□□□□ -0
EPCAM-202ENST00000405271 TMEM141Q96I45 108 aa15.04■□□□□ -0
EPCAM-202ENST00000405271 FABP4P15090 132 aa15.03■□□□□ -0
EPCAM-202ENST00000405271 A0A1B0GUV1 79 aa15.02■□□□□ -0
EPCAM-202ENST00000405271 IFITM10A6NMD0 228 aa15.02■□□□□ -0
EPCAM-202ENST00000405271 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.02■□□□□ -0
EPCAM-202ENST00000405271 DGAT2L7PQ6IED9 249 aa15.02■□□□□ -0
EPCAM-202ENST00000405271 WFDC10BQ8IUB3 73 aa15.02■□□□□ -0
EPCAM-202ENST00000405271 TMEM101Q96IK0 257 aa15.02■□□□□ -0
EPCAM-202ENST00000405271 TMEM262E9PQX1 116 aa15.02□□□□□ -0.01
EPCAM-202ENST00000405271 IFI27L1Q96BM0 104 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms