RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 DNLZQ5SXM8 178 aa2.95□□□□□ -1.94
HMGB3P19-201ENST00000403971 IBA57Q5T440 356 aaKnown RBP2.95□□□□□ -1.94
HMGB3P19-201ENST00000403971 LINC00322Q6ZN03 302 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P19-201ENST00000403971 TMEM256Q8N2U0 113 aa2.95□□□□□ -1.94
HMGB3P19-201ENST00000403971 DEFB125Q8N687 156 aa2.95□□□□□ -1.94
HMGB3P19-201ENST00000403971 SFRP2Q96HF1 295 aa2.95□□□□□ -1.94
HMGB3P19-201ENST00000403971 KCNS1Q96KK3 526 aa2.95□□□□□ -1.94
HMGB3P19-201ENST00000403971 IMMP2LQ96T52 175 aa2.95□□□□□ -1.94
HMGB3P19-201ENST00000403971 LINC00467Q9BRT7 94 aa2.95□□□□□ -1.94
HMGB3P19-201ENST00000403971 CHAC1Q9BUX1 264 aa2.95□□□□□ -1.94
HMGB3P19-201ENST00000403971 TUBA4BQ9H853 241 aa2.95□□□□□ -1.94
HMGB3P19-201ENST00000403971 V9GYV3 84 aa2.95□□□□□ -1.94
HMGB3P19-201ENST00000403971 TRAV9-1A0A075B6T8 112 aa2.94□□□□□ -1.94
HMGB3P19-201ENST00000403971 TRAV12-3A0A0B4J271 114 aa2.94□□□□□ -1.94
HMGB3P19-201ENST00000403971 ZNF705GA8MUZ8 300 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P19-201ENST00000403971 M0R2Z0 102 aa2.94□□□□□ -1.94
HMGB3P19-201ENST00000403971 MRPL23Q16540 153 aaKnown RBP2.94□□□□□ -1.94
HMGB3P19-201ENST00000403971 SPINK13Q1W4C9 94 aa2.94□□□□□ -1.94
HMGB3P19-201ENST00000403971 PRR9Q5T870 116 aa2.94□□□□□ -1.94
HMGB3P19-201ENST00000403971 TSKUQ8WUA8 353 aa2.94□□□□□ -1.94
HMGB3P19-201ENST00000403971 BTF3L4Q96K17 158 aa2.94□□□□□ -1.94
HMGB3P19-201ENST00000403971 RNASE7Q9H1E1 156 aaKnown RBP2.94□□□□□ -1.94
HMGB3P19-201ENST00000403971 WFDC10AQ9H1F0 79 aa2.94□□□□□ -1.94
HMGB3P19-201ENST00000403971 RPP21Q9H633 154 aaKnown RBP2.94□□□□□ -1.94
HMGB3P19-201ENST00000403971 IL36BQ9NZH7 164 aa2.94□□□□□ -1.94
HMGB3P19-201ENST00000403971 DNAH9Q9NYC9 4486 aa2.93□□□□□ -1.94
HMGB3P19-201ENST00000403971 TRBV24-1A0A075B6N3 115 aa2.93□□□□□ -1.94
HMGB3P19-201ENST00000403971 TRAV12-2A0A075B6T6 113 aa2.93□□□□□ -1.94
HMGB3P19-201ENST00000403971 A0A1B0GVX0 72 aa2.93□□□□□ -1.94
HMGB3P19-201ENST00000403971 SMIM27A0A1W2PRY6 76 aa2.93□□□□□ -1.94
HMGB3P19-201ENST00000403971 TMEM189A5PLL7 270 aa2.93□□□□□ -1.94
HMGB3P19-201ENST00000403971 SMIM9A6NGZ8 99 aa2.93□□□□□ -1.94
HMGB3P19-201ENST00000403971 F2Z2F3 143 aa2.93□□□□□ -1.94
HMGB3P19-201ENST00000403971 ORM1P02763 201 aa2.93□□□□□ -1.94
HMGB3P19-201ENST00000403971 OR5AL1P0C617 328 aa2.93□□□□□ -1.94
HMGB3P19-201ENST00000403971 IGLC6P0CF74 106 aa2.93□□□□□ -1.94
HMGB3P19-201ENST00000403971 PRB4P10163 310 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P19-201ENST00000403971 S100PP25815 95 aa2.93□□□□□ -1.94
HMGB3P19-201ENST00000403971 RNASE4P34096 147 aaKnown RBP2.93□□□□□ -1.94
HMGB3P19-201ENST00000403971 RPL19P84098 196 aaKnown RBP2.93□□□□□ -1.94
HMGB3P19-201ENST00000403971 BTN1A1Q13410 526 aa2.93□□□□□ -1.94
HMGB3P19-201ENST00000403971 LINC00483Q53H64 154 aa2.93□□□□□ -1.94
HMGB3P19-201ENST00000403971 ZNF705AQ6ZN79 300 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P19-201ENST00000403971 TEX43Q6ZNM6 134 aa2.93□□□□□ -1.94
HMGB3P19-201ENST00000403971 C1orf158Q8N1D5 194 aa2.93□□□□□ -1.94
HMGB3P19-201ENST00000403971 C15orf56Q8N910 161 aa2.93□□□□□ -1.94
HMGB3P19-201ENST00000403971 OR2D3Q8NGH3 330 aa2.93□□□□□ -1.94
HMGB3P19-201ENST00000403971 CNFNQ9BYD5 112 aa2.93□□□□□ -1.94
HMGB3P19-201ENST00000403971 SMCO4Q9NRQ5 59 aa2.93□□□□□ -1.94
HMGB3P19-201ENST00000403971 TP53TG1Q9Y2A0 90 aa2.93□□□□□ -1.94
HMGB3P19-201ENST00000403971 GOLT1BQ9Y3E0 138 aa2.93□□□□□ -1.94
HMGB3P19-201ENST00000403971 A0A1B0GW15 77 aa2.92□□□□□ -1.94
HMGB3P19-201ENST00000403971 HIGD1CA8MV81 97 aa2.92□□□□□ -1.94
HMGB3P19-201ENST00000403971 TYMSP04818 313 aa2.92□□□□□ -1.94
HMGB3P19-201ENST00000403971 FXYD7P58549 80 aa2.92□□□□□ -1.94
HMGB3P19-201ENST00000403971 RBMY1FQ15415 496 aaKnown RBP2.92□□□□□ -1.94
HMGB3P19-201ENST00000403971 COX19Q49B96 90 aa2.92□□□□□ -1.94
HMGB3P19-201ENST00000403971 LCE3AQ5TA76 89 aa2.92□□□□□ -1.94
HMGB3P19-201ENST00000403971 RASL11AQ6T310 242 aa2.92□□□□□ -1.94
HMGB3P19-201ENST00000403971 ATP5L2Q7Z4Y8 100 aa2.92□□□□□ -1.94
HMGB3P19-201ENST00000403971 FER1L6-AS1Q8NA97 138 aa2.92□□□□□ -1.94
HMGB3P19-201ENST00000403971 NUP35Q8NFH5 326 aa2.92□□□□□ -1.94
HMGB3P19-201ENST00000403971 TMEM263Q8WUH6 116 aaKnown RBP2.92□□□□□ -1.94
HMGB3P19-201ENST00000403971 PTH2Q96A98 100 aa2.92□□□□□ -1.94
HMGB3P19-201ENST00000403971 LINC01587Q99440 93 aa2.92□□□□□ -1.94
HMGB3P19-201ENST00000403971 NAT8BQ9UHF3 227 aa2.92□□□□□ -1.94
HMGB3P19-201ENST00000403971 HUWE1Q7Z6Z7 4374 aaKnown RBP2.91□□□□□ -1.94
HMGB3P19-201ENST00000403971 A0A1B0GUT8 65 aa2.91□□□□□ -1.94
HMGB3P19-201ENST00000403971 K7EIL1 84 aa2.91□□□□□ -1.94
HMGB3P19-201ENST00000403971 GNRH2O43555 120 aa2.91□□□□□ -1.94
HMGB3P19-201ENST00000403971 S100A8P05109 93 aa2.91□□□□□ -1.94
HMGB3P19-201ENST00000403971 ARMS2P0C7Q2 107 aa2.91□□□□□ -1.94
HMGB3P19-201ENST00000403971 RNASE3P12724 160 aaKnown RBP2.91□□□□□ -1.94
HMGB3P19-201ENST00000403971 S100A4P26447 101 aaKnown RBP2.91□□□□□ -1.94
HMGB3P19-201ENST00000403971 ASIPP42127 132 aa2.91□□□□□ -1.94
HMGB3P19-201ENST00000403971 TCL1AP56279 114 aa2.91□□□□□ -1.94
HMGB3P19-201ENST00000403971 KRTAP10-8P60410 259 aa2.91□□□□□ -1.94
HMGB3P19-201ENST00000403971 CACNG7P62955 275 aa2.91□□□□□ -1.94
HMGB3P19-201ENST00000403971 ELOBQ15370 118 aa2.91□□□□□ -1.94
HMGB3P19-201ENST00000403971 RRN3P1Q2M238 152 aa2.91□□□□□ -1.94
HMGB3P19-201ENST00000403971 CEMP1Q6PRD7 247 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P19-201ENST00000403971 Q6ZQT7 251 aa2.91□□□□□ -1.94
HMGB3P19-201ENST00000403971 GATD1Q8NB37 220 aa2.91□□□□□ -1.94
HMGB3P19-201ENST00000403971 BORCS7Q96B45 105 aa2.91□□□□□ -1.94
HMGB3P19-201ENST00000403971 YPEL4Q96NS1 127 aa2.91□□□□□ -1.94
HMGB3P19-201ENST00000403971 TMEM208Q9BTX3 173 aa2.91□□□□□ -1.94
HMGB3P19-201ENST00000403971 NAGKQ9UJ70 344 aa2.91□□□□□ -1.94
HMGB3P19-201ENST00000403971 PHLDA3Q9Y5J5 127 aa2.91□□□□□ -1.94
HMGB3P19-201ENST00000403971 NBEAL2Q6ZNJ1 2754 aa2.91□□□□□ -1.94
HMGB3P19-201ENST00000403971 IGKV2-28A0A075B6P5 120 aa2.9□□□□□ -1.95
HMGB3P19-201ENST00000403971 TMSB15BA0A087X1C1 80 aa2.9□□□□□ -1.95
HMGB3P19-201ENST00000403971 A0A1B0GXF2 115 aa2.9□□□□□ -1.95
HMGB3P19-201ENST00000403971 GRIFINA4D1Z8 144 aa2.9□□□□□ -1.95
HMGB3P19-201ENST00000403971 COLCA2A8K830 154 aa2.9□□□□□ -1.95
HMGB3P19-201ENST00000403971 H3BVH4 76 aa2.9□□□□□ -1.95
HMGB3P19-201ENST00000403971 M0R2P5 195 aa2.9□□□□□ -1.95
HMGB3P19-201ENST00000403971 IGKV2D-28P01615 120 aa2.9□□□□□ -1.95
HMGB3P19-201ENST00000403971 MT-ND6P03923 174 aa2.9□□□□□ -1.95
HMGB3P19-201ENST00000403971 TRGC1P0CF51 173 aa2.9□□□□□ -1.95
HMGB3P19-201ENST00000403971 GZMBP10144 247 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 208.3 ms