RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 IQCJQ1A5X6 159 aa22.76■■□□□ 1.23
CSNK1E-204ENST00000403904 IGLV2-18A0A075B6J9 118 aa22.76■■□□□ 1.23
CSNK1E-204ENST00000403904 AMTP48728 403 aa22.76■■□□□ 1.23
CSNK1E-204ENST00000403904 SACSQ9NZJ4 4579 aa22.75■■□□□ 1.23
CSNK1E-204ENST00000403904 FCER1GP30273 86 aa22.75■■□□□ 1.23
CSNK1E-204ENST00000403904 IFI27P40305 119 aaPredicted RBP22.75■■□□□ 1.23
CSNK1E-204ENST00000403904 TCAPO15273 167 aa22.74■■□□□ 1.23
CSNK1E-204ENST00000403904 Q8N8P6 123 aa22.74■■□□□ 1.23
CSNK1E-204ENST00000403904 Q9H8V8 135 aa22.74■■□□□ 1.23
CSNK1E-204ENST00000403904 CHCHD5Q9BSY4 110 aa22.73■■□□□ 1.23
CSNK1E-204ENST00000403904 C18orf32Q8TCD1 76 aa22.72■■□□□ 1.23
CSNK1E-204ENST00000403904 SIVA1O15304 175 aa22.72■■□□□ 1.23
CSNK1E-204ENST00000403904 TMEM243Q9BU79 118 aa22.72■■□□□ 1.23
CSNK1E-204ENST00000403904 KMT2CQ8NEZ4 4911 aaKnown RBP22.71■■□□□ 1.23
CSNK1E-204ENST00000403904 PRSS3P2Q8NHM4 247 aa22.71■■□□□ 1.23
CSNK1E-204ENST00000403904 CHCHD7Q9BUK0 85 aa22.71■■□□□ 1.23
CSNK1E-204ENST00000403904 NXT2Q9NPJ8 142 aaKnown RBP22.71■■□□□ 1.23
CSNK1E-204ENST00000403904 KMT2AQ03164 3969 aa22.7■■□□□ 1.22
CSNK1E-204ENST00000403904 HYDINQ4G0P3 5121 aa22.67■■□□□ 1.22
CSNK1E-204ENST00000403904 TMEM262E9PQX1 116 aa22.67■■□□□ 1.22
CSNK1E-204ENST00000403904 ESDP10768 282 aa22.67■■□□□ 1.22
CSNK1E-204ENST00000403904 GAGE6Q13070 117 aa22.67■■□□□ 1.22
CSNK1E-204ENST00000403904 NIT1Q86X76 327 aa22.67■■□□□ 1.22
CSNK1E-204ENST00000403904 Q8N3U1 123 aa22.67■■□□□ 1.22
CSNK1E-204ENST00000403904 IGKV2D-29A0A075B6S2 120 aaPredicted RBP22.67■■□□□ 1.22
CSNK1E-204ENST00000403904 LCE6AA0A183 80 aa22.67■■□□□ 1.22
CSNK1E-204ENST00000403904 IGKV2-29A2NJV5 120 aaPredicted RBP22.67■■□□□ 1.22
CSNK1E-204ENST00000403904 UBE2L6O14933 153 aa22.64■■□□□ 1.22
CSNK1E-204ENST00000403904 DNAH10OSP0CZ25 163 aa22.64■■□□□ 1.22
CSNK1E-204ENST00000403904 IGHV3-30P01768 117 aa22.63■■□□□ 1.21
CSNK1E-204ENST00000403904 IGHV3-33P01772 117 aa22.63■■□□□ 1.21
CSNK1E-204ENST00000403904 IGHV3-30-3P0DP02 117 aa22.63■■□□□ 1.21
CSNK1E-204ENST00000403904 IGHV3-30-5P0DP03 117 aa22.63■■□□□ 1.21
CSNK1E-204ENST00000403904 LINC01556Q5JQF7 62 aa22.63■■□□□ 1.21
CSNK1E-204ENST00000403904 A0A087WX48 190 aa22.62■■□□□ 1.21
CSNK1E-204ENST00000403904 FA2HQ7L5A8 372 aa22.62■■□□□ 1.21
CSNK1E-204ENST00000403904 LAGE3Q14657 143 aa22.61■■□□□ 1.21
CSNK1E-204ENST00000403904 MPV17L2Q567V2 206 aa22.61■■□□□ 1.21
CSNK1E-204ENST00000403904 URB1-AS1Q96HZ7 61 aa22.61■■□□□ 1.21
CSNK1E-204ENST00000403904 K7EMI3 77 aa22.6■■□□□ 1.21
CSNK1E-204ENST00000403904 C20orf203Q8NBC4 194 aa22.6■■□□□ 1.21
CSNK1E-204ENST00000403904 DNAH6Q9C0G6 4158 aa22.59■■□□□ 1.21
CSNK1E-204ENST00000403904 ORMDL2Q53FV1 153 aa22.59■■□□□ 1.21
CSNK1E-204ENST00000403904 Q8N976 141 aa22.59■■□□□ 1.21
CSNK1E-204ENST00000403904 LINC01546A6NGU7 62 aa22.58■■□□□ 1.2
CSNK1E-204ENST00000403904 LINC00614P0C842 121 aa22.58■■□□□ 1.2
CSNK1E-204ENST00000403904 H7C423 109 aa22.57■■□□□ 1.2
CSNK1E-204ENST00000403904 PKIAP61925 76 aa22.57■■□□□ 1.2
CSNK1E-204ENST00000403904 RBX1P62877 108 aa22.57■■□□□ 1.2
CSNK1E-204ENST00000403904 RPL39P62891 51 aaKnown RBP22.57■■□□□ 1.2
CSNK1E-204ENST00000403904 FGF6P10767 208 aa22.56■■□□□ 1.2
CSNK1E-204ENST00000403904 Q0VG73 95 aa22.56■■□□□ 1.2
CSNK1E-204ENST00000403904 NBDYA0A0U1RRE5 68 aa22.55■■□□□ 1.2
CSNK1E-204ENST00000403904 M0R2N4 97 aa22.55■■□□□ 1.2
CSNK1E-204ENST00000403904 HIST1H2BKO60814 126 aa22.55■■□□□ 1.2
CSNK1E-204ENST00000403904 HIST1H2BJP06899 126 aa22.55■■□□□ 1.2
CSNK1E-204ENST00000403904 HIST1H2BOP23527 126 aa22.55■■□□□ 1.2
CSNK1E-204ENST00000403904 HIST1H2BBP33778 126 aa22.55■■□□□ 1.2
CSNK1E-204ENST00000403904 HIST1H2BDP58876 126 aa22.55■■□□□ 1.2
CSNK1E-204ENST00000403904 HIST1H2BCP62807 126 aa22.55■■□□□ 1.2
CSNK1E-204ENST00000403904 HIST2H2BEQ16778 126 aa22.55■■□□□ 1.2
CSNK1E-204ENST00000403904 HIST2H2BFQ5QNW6 126 aaPredicted RBP22.55■■□□□ 1.2
CSNK1E-204ENST00000403904 RNASEKQ6P5S7 137 aaKnown RBP22.55■■□□□ 1.2
CSNK1E-204ENST00000403904 BAGE3Q86Y29 109 aa22.55■■□□□ 1.2
CSNK1E-204ENST00000403904 HIST1H2BHQ93079 126 aa22.55■■□□□ 1.2
CSNK1E-204ENST00000403904 HIST1H2BNQ99877 126 aa22.55■■□□□ 1.2
CSNK1E-204ENST00000403904 HIST1H2BMQ99879 126 aa22.55■■□□□ 1.2
CSNK1E-204ENST00000403904 AP5S1Q9NUS5 200 aa22.55■■□□□ 1.2
CSNK1E-204ENST00000403904 RAB5BP61020 215 aa22.55■■□□□ 1.2
CSNK1E-204ENST00000403904 AMMECR1LQ6DCA0 310 aa22.55■■□□□ 1.2
CSNK1E-204ENST00000403904 TMEM18Q96B42 140 aa22.55■■□□□ 1.2
CSNK1E-204ENST00000403904 KRTAP1-5Q9BYS1 174 aa22.55■■□□□ 1.2
CSNK1E-204ENST00000403904 IGLV4-60A0A075B6I1 120 aa22.52■■□□□ 1.2
CSNK1E-204ENST00000403904 TRAV9-2A0A087WT02 112 aa22.52■■□□□ 1.2
CSNK1E-204ENST00000403904 A0A1B0GUV1 79 aa22.52■■□□□ 1.2
CSNK1E-204ENST00000403904 C1orf196B1AJZ1 125 aa22.52■■□□□ 1.2
CSNK1E-204ENST00000403904 BTF3P20290 206 aaKnown RBP22.52■■□□□ 1.2
CSNK1E-204ENST00000403904 RYR2Q92736 4967 aa22.51■■□□□ 1.19
CSNK1E-204ENST00000403904 C2orf66Q6UXQ4 117 aa22.5■■□□□ 1.19
CSNK1E-204ENST00000403904 KLK12Q9UKR0 248 aa22.5■■□□□ 1.19
CSNK1E-204ENST00000403904 UBE2D4Q9Y2X8 147 aa22.5■■□□□ 1.19
CSNK1E-204ENST00000403904 ANGP03950 147 aaKnown RBP22.5■■□□□ 1.19
CSNK1E-204ENST00000403904 MRPL52Q86TS9 123 aaKnown RBP22.5■■□□□ 1.19
CSNK1E-204ENST00000403904 TTC32Q5I0X7 151 aa22.49■■□□□ 1.19
CSNK1E-204ENST00000403904 CYSLTR1Q9Y271 337 aa22.49■■□□□ 1.19
CSNK1E-204ENST00000403904 C10orf126Q8N4M7 172 aa22.48■■□□□ 1.19
CSNK1E-204ENST00000403904 K7EP13 123 aa22.47■■□□□ 1.19
CSNK1E-204ENST00000403904 ZNF25P17030 456 aaPredicted RBP22.47■■□□□ 1.19
CSNK1E-204ENST00000403904 CHCHD1Q96BP2 118 aaKnown RBP22.47■■□□□ 1.19
CSNK1E-204ENST00000403904 TMEM101Q96IK0 257 aa22.47■■□□□ 1.19
CSNK1E-204ENST00000403904 PMCHL1Q16048 86 aa22.46■■□□□ 1.19
CSNK1E-204ENST00000403904 Q6ZR54 194 aa22.46■■□□□ 1.19
CSNK1E-204ENST00000403904 SERF1AO75920 110 aa22.46■■□□□ 1.19
CSNK1E-204ENST00000403904 LINC00310P59036 64 aa22.46■■□□□ 1.19
CSNK1E-204ENST00000403904 DGAT2L7PQ6IED9 249 aa22.46■■□□□ 1.19
CSNK1E-204ENST00000403904 OR5A1Q8NGJ0 315 aa22.46■■□□□ 1.19
CSNK1E-204ENST00000403904 G0S2P27469 103 aa22.45■■□□□ 1.18
CSNK1E-204ENST00000403904 SMAGPQ0VAQ4 97 aa22.45■■□□□ 1.18
CSNK1E-204ENST00000403904 LINC00269Q8N2A0 174 aa22.44■■□□□ 1.18
CSNK1E-204ENST00000403904 TOMM6Q96B49 74 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms