RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-208ENST00000403461 ZNF80P51504 273 aaPredicted RBP4.32□□□□□ -1.72
CEACAM1-208ENST00000403461 HNRNPA3P51991 378 aaKnown RBP4.32□□□□□ -1.72
CEACAM1-208ENST00000403461 FLI1Q01543 452 aaPredicted RBP4.32□□□□□ -1.72
CEACAM1-208ENST00000403461 C5orf47Q569G3 176 aa4.32□□□□□ -1.72
CEACAM1-208ENST00000403461 LINC00299Q6ZSB3 139 aa4.32□□□□□ -1.72
CEACAM1-208ENST00000403461 TMEM75Q8N9X5 138 aa4.32□□□□□ -1.72
CEACAM1-208ENST00000403461 OR10G7Q8NGN6 311 aa4.32□□□□□ -1.72
CEACAM1-208ENST00000403461 LINC00479Q96M42 142 aa4.32□□□□□ -1.72
CEACAM1-208ENST00000403461 SAMD10Q9BYL1 202 aa4.32□□□□□ -1.72
CEACAM1-208ENST00000403461 RNF213Q63HN8 5207 aa4.31□□□□□ -1.72
CEACAM1-208ENST00000403461 LRP1Q07954 4544 aaKnown RBP4.31□□□□□ -1.72
CEACAM1-208ENST00000403461 SNAI2O43623 268 aa4.31□□□□□ -1.72
CEACAM1-208ENST00000403461 ANGP03950 147 aaKnown RBP4.31□□□□□ -1.72
CEACAM1-208ENST00000403461 IFITM3Q01628 133 aa4.31□□□□□ -1.72
CEACAM1-208ENST00000403461 MIAQ16674 131 aa4.31□□□□□ -1.72
CEACAM1-208ENST00000403461 COX8CQ7Z4L0 72 aa4.31□□□□□ -1.72
CEACAM1-208ENST00000403461 C14orf178Q8N769 122 aaPredicted RBP4.31□□□□□ -1.72
CEACAM1-208ENST00000403461 DNAJC30Q96LL9 226 aa4.31□□□□□ -1.72
CEACAM1-208ENST00000403461 CHCHD5Q9BSY4 110 aa4.31□□□□□ -1.72
CEACAM1-208ENST00000403461 GFRA4Q9GZZ7 299 aa4.31□□□□□ -1.72
CEACAM1-208ENST00000403461 IL36BQ9NZH7 164 aa4.31□□□□□ -1.72
CEACAM1-208ENST00000403461 PHLDA3Q9Y5J5 127 aa4.31□□□□□ -1.72
CEACAM1-208ENST00000403461 DNAH8Q96JB1 4490 aa4.3□□□□□ -1.72
CEACAM1-208ENST00000403461 TRBV7-3A0A075B6L6 115 aa4.3□□□□□ -1.72
CEACAM1-208ENST00000403461 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.3□□□□□ -1.72
CEACAM1-208ENST00000403461 FABP5P3A8MUU1 101 aa4.3□□□□□ -1.72
CEACAM1-208ENST00000403461 B4DEV8 164 aa4.3□□□□□ -1.72
CEACAM1-208ENST00000403461 H3BVH4 76 aa4.3□□□□□ -1.72
CEACAM1-208ENST00000403461 PFDN1O60925 122 aa4.3□□□□□ -1.72
CEACAM1-208ENST00000403461 EIF3GO75821 320 aaKnown RBP eCLIP4.3□□□□□ -1.72
CEACAM1-208ENST00000403461 ARL14EPLP0DKL9 152 aa4.3□□□□□ -1.72
CEACAM1-208ENST00000403461 MT1HL1P0DM35 61 aa4.3□□□□□ -1.72
CEACAM1-208ENST00000403461 TPT1P13693 172 aaKnown RBP4.3□□□□□ -1.72
CEACAM1-208ENST00000403461 RPL12P30050 165 aaKnown RBP4.3□□□□□ -1.72
CEACAM1-208ENST00000403461 DEFA1P59665 94 aa4.3□□□□□ -1.72
CEACAM1-208ENST00000403461 DEFA3P59666 94 aa4.3□□□□□ -1.72
CEACAM1-208ENST00000403461 RAB2AP61019 212 aa4.3□□□□□ -1.72
CEACAM1-208ENST00000403461 TMEM97Q5BJF2 176 aa4.3□□□□□ -1.72
CEACAM1-208ENST00000403461 UFSP1Q6NVU6 142 aa4.3□□□□□ -1.72
CEACAM1-208ENST00000403461 SMIM15Q7Z3B0 74 aa4.3□□□□□ -1.72
CEACAM1-208ENST00000403461 KRTAP7-1Q8IUC3 87 aa4.3□□□□□ -1.72
CEACAM1-208ENST00000403461 C9orf163Q8N9P6 203 aa4.3□□□□□ -1.72
CEACAM1-208ENST00000403461 INO80EQ8NBZ0 244 aaPredicted RBP4.3□□□□□ -1.72
CEACAM1-208ENST00000403461 OR2D3Q8NGH3 330 aa4.3□□□□□ -1.72
CEACAM1-208ENST00000403461 C7orf33Q8WU49 177 aa4.3□□□□□ -1.72
CEACAM1-208ENST00000403461 SMIM3Q9BZL3 60 aa4.3□□□□□ -1.72
CEACAM1-208ENST00000403461 TMEM167BQ9NRX6 74 aa4.3□□□□□ -1.72
CEACAM1-208ENST00000403461 HSPB11Q9Y547 144 aa4.3□□□□□ -1.72
CEACAM1-208ENST00000403461 IGLV7-46A0A075B6I9 117 aa4.29□□□□□ -1.72
CEACAM1-208ENST00000403461 IGHV3-64A0A075B6Q5 118 aa4.29□□□□□ -1.72
CEACAM1-208ENST00000403461 TRBV6-8A0A0A6YYG3 113 aa4.29□□□□□ -1.72
CEACAM1-208ENST00000403461 IGKV3D-20A0A0C4DH25 116 aa4.29□□□□□ -1.72
CEACAM1-208ENST00000403461 INMT-MINDY4F8WBC2 141 aa4.29□□□□□ -1.72
CEACAM1-208ENST00000403461 HMGB3O15347 200 aaKnown RBP4.29□□□□□ -1.72
CEACAM1-208ENST00000403461 SIX6O95475 246 aa4.29□□□□□ -1.72
CEACAM1-208ENST00000403461 ARMS2P0C7Q2 107 aa4.29□□□□□ -1.72
CEACAM1-208ENST00000403461 PMCHP20382 165 aa4.29□□□□□ -1.72
CEACAM1-208ENST00000403461 UBE2D3P61077 147 aa4.29□□□□□ -1.72
CEACAM1-208ENST00000403461 UBE2D2P62837 147 aa4.29□□□□□ -1.72
CEACAM1-208ENST00000403461 ENHOQ6UWT2 76 aa4.29□□□□□ -1.72
CEACAM1-208ENST00000403461 Q6ZRP5 223 aa4.29□□□□□ -1.72
CEACAM1-208ENST00000403461 ZFP82Q8N141 532 aa4.29□□□□□ -1.72
CEACAM1-208ENST00000403461 PPP1R1CQ8WVI7 109 aa4.29□□□□□ -1.72
CEACAM1-208ENST00000403461 RNF185Q96GF1 192 aa4.29□□□□□ -1.72
CEACAM1-208ENST00000403461 SFRP2Q96HF1 295 aa4.29□□□□□ -1.72
CEACAM1-208ENST00000403461 MAP1LC3CQ9BXW4 147 aa4.29□□□□□ -1.72
CEACAM1-208ENST00000403461 JPT2Q9H910 190 aa4.29□□□□□ -1.72
CEACAM1-208ENST00000403461 EPDR1Q9UM22 224 aa4.29□□□□□ -1.72
CEACAM1-208ENST00000403461 NDUFAF8A1L188 74 aa4.28□□□□□ -1.72
CEACAM1-208ENST00000403461 M0R381 172 aa4.28□□□□□ -1.72
CEACAM1-208ENST00000403461 SSNA1O43805 119 aa4.28□□□□□ -1.72
CEACAM1-208ENST00000403461 PTTG1O95997 202 aa4.28□□□□□ -1.72
CEACAM1-208ENST00000403461 CXorf1O96002 111 aa4.28□□□□□ -1.72
CEACAM1-208ENST00000403461 IFNA7P01567 189 aa4.28□□□□□ -1.72
CEACAM1-208ENST00000403461 G0S2P27469 103 aa4.28□□□□□ -1.72
CEACAM1-208ENST00000403461 GCHFRP30047 84 aa4.28□□□□□ -1.72
CEACAM1-208ENST00000403461 RPL13AP40429 203 aaKnown RBP4.28□□□□□ -1.72
CEACAM1-208ENST00000403461 MPV17L2Q567V2 206 aa4.28□□□□□ -1.72
CEACAM1-208ENST00000403461 SDIM1Q6ZPB5 146 aa4.28□□□□□ -1.72
CEACAM1-208ENST00000403461 BOD1L2Q8IYS8 172 aa4.28□□□□□ -1.72
CEACAM1-208ENST00000403461 Q9UF83 564 aa4.28□□□□□ -1.72
CEACAM1-208ENST00000403461 ARL2-SNX15V9GYD0 113 aa4.28□□□□□ -1.72
CEACAM1-208ENST00000403461 FAT3Q8TDW7 4589 aa4.28□□□□□ -1.73
CEACAM1-208ENST00000403461 A0A1W2PRE2 83 aa4.27□□□□□ -1.73
CEACAM1-208ENST00000403461 GRIFINA4D1Z8 144 aa4.27□□□□□ -1.73
CEACAM1-208ENST00000403461 TMEM238C9JI98 176 aa4.27□□□□□ -1.73
CEACAM1-208ENST00000403461 M0R036 132 aa4.27□□□□□ -1.73
CEACAM1-208ENST00000403461 MPC2O95563 127 aa4.27□□□□□ -1.73
CEACAM1-208ENST00000403461 CNBPP62633 177 aaKnown RBP4.27□□□□□ -1.73
CEACAM1-208ENST00000403461 SRSF9Q13242 221 aaKnown RBP eCLIP4.27□□□□□ -1.737e-6■■■□□ 18.9
CEACAM1-208ENST00000403461 ZNF56Q15929 161 aa4.27□□□□□ -1.73
CEACAM1-208ENST00000403461 DNLZQ5SXM8 178 aa4.27□□□□□ -1.73
CEACAM1-208ENST00000403461 FAM162BQ5T6X4 162 aa4.27□□□□□ -1.73
CEACAM1-208ENST00000403461 FAM74A7A6NL05 159 aa4.26□□□□□ -1.73
CEACAM1-208ENST00000403461 KRBOX1C9JBD0 128 aa4.26□□□□□ -1.73
CEACAM1-208ENST00000403461 H7C423 109 aa4.26□□□□□ -1.73
CEACAM1-208ENST00000403461 HSBP1O75506 76 aa4.26□□□□□ -1.73
CEACAM1-208ENST00000403461 H2BFSP57053 126 aa4.26□□□□□ -1.73
CEACAM1-208ENST00000403461 UBE2G1P62253 170 aa4.26□□□□□ -1.73
CEACAM1-208ENST00000403461 RBX1P62877 108 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms