RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 A6NHS1 94 aa7.19□□□□□ -1.26
SPTLC1P3-201ENST00000403408 UPK1BO75841 260 aa7.19□□□□□ -1.26
SPTLC1P3-201ENST00000403408 AKR1C3P42330 323 aa7.19□□□□□ -1.26
SPTLC1P3-201ENST00000403408 KRTAP11-1Q8IUC1 163 aa7.19□□□□□ -1.26
SPTLC1P3-201ENST00000403408 PGLYRP4Q96LB8 373 aa7.19□□□□□ -1.26
SPTLC1P3-201ENST00000403408 AP1S3Q96PC3 154 aa7.19□□□□□ -1.26
SPTLC1P3-201ENST00000403408 IGLC6P0CF74 106 aa7.18□□□□□ -1.26
SPTLC1P3-201ENST00000403408 FHITP49789 147 aa7.18□□□□□ -1.26
SPTLC1P3-201ENST00000403408 PTTG1IPP53801 180 aa7.18□□□□□ -1.26
SPTLC1P3-201ENST00000403408 MAP1LC3B2A6NCE7 125 aa7.17□□□□□ -1.26
SPTLC1P3-201ENST00000403408 KRTAP1-4P0C5Y4 121 aa7.17□□□□□ -1.26
SPTLC1P3-201ENST00000403408 SMIM17P0DL12 118 aa7.17□□□□□ -1.26
SPTLC1P3-201ENST00000403408 AMTP48728 403 aa7.17□□□□□ -1.26
SPTLC1P3-201ENST00000403408 CST9LP1Q5W188 147 aa7.17□□□□□ -1.26
SPTLC1P3-201ENST00000403408 RASL11AQ6T310 242 aa7.17□□□□□ -1.26
SPTLC1P3-201ENST00000403408 Q6ZNX1 250 aa7.17□□□□□ -1.26
SPTLC1P3-201ENST00000403408 ZNF664Q8N3J9 261 aa7.17□□□□□ -1.26
SPTLC1P3-201ENST00000403408 CARD19Q96LW7 228 aa7.17□□□□□ -1.26
SPTLC1P3-201ENST00000403408 MAP1LC3BQ9GZQ8 125 aa7.17□□□□□ -1.26
SPTLC1P3-201ENST00000403408 LINC00474Q9P2X8 69 aa7.17□□□□□ -1.26
SPTLC1P3-201ENST00000403408 FSIP2Q5CZC0 6907 aa7.17□□□□□ -1.26
SPTLC1P3-201ENST00000403408 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.16□□□□□ -1.26
SPTLC1P3-201ENST00000403408 IGKV2-29A2NJV5 120 aaPredicted RBP7.16□□□□□ -1.26
SPTLC1P3-201ENST00000403408 PAGE4O60829 102 aa7.16□□□□□ -1.26
SPTLC1P3-201ENST00000403408 PRR4Q16378 134 aa7.16□□□□□ -1.26
SPTLC1P3-201ENST00000403408 PHF5AQ7RTV0 110 aaKnown RBP7.16□□□□□ -1.26
SPTLC1P3-201ENST00000403408 BAGE2Q86Y30 109 aa7.16□□□□□ -1.26
SPTLC1P3-201ENST00000403408 KRTAP4-12Q9BQ66 201 aa7.16□□□□□ -1.26
SPTLC1P3-201ENST00000403408 NIT2Q9NQR4 276 aa7.16□□□□□ -1.26
SPTLC1P3-201ENST00000403408 UBE2L6O14933 153 aa7.15□□□□□ -1.26
SPTLC1P3-201ENST00000403408 XCL1P47992 114 aa7.15□□□□□ -1.26
SPTLC1P3-201ENST00000403408 GAGE2BQ13066 116 aa7.15□□□□□ -1.26
SPTLC1P3-201ENST00000403408 COTL1Q14019 142 aa7.15□□□□□ -1.26
SPTLC1P3-201ENST00000403408 BCL2P10415 239 aa7.14□□□□□ -1.27
SPTLC1P3-201ENST00000403408 NTF3P20783 257 aa7.14□□□□□ -1.27
SPTLC1P3-201ENST00000403408 DEFA1P59665 94 aa7.14□□□□□ -1.27
SPTLC1P3-201ENST00000403408 CACNG7P62955 275 aa7.14□□□□□ -1.27
SPTLC1P3-201ENST00000403408 C9orf116Q5BN46 136 aaPredicted RBP7.14□□□□□ -1.27
SPTLC1P3-201ENST00000403408 C1orf137Q5JT78 98 aa7.14□□□□□ -1.27
SPTLC1P3-201ENST00000403408 STOML3Q8TAV4 291 aa7.14□□□□□ -1.27
SPTLC1P3-201ENST00000403408 TCEAL7Q9BRU2 100 aa7.14□□□□□ -1.27
SPTLC1P3-201ENST00000403408 TPPP3Q9BW30 176 aa7.14□□□□□ -1.27
SPTLC1P3-201ENST00000403408 ALG5Q9Y673 324 aa7.14□□□□□ -1.27
SPTLC1P3-201ENST00000403408 TRAV26-2A0A0B4J265 109 aa7.13□□□□□ -1.27
SPTLC1P3-201ENST00000403408 IGHV1-58A0A0C4DH39 117 aa7.13□□□□□ -1.27
SPTLC1P3-201ENST00000403408 A0A0U1RQV1 116 aa7.13□□□□□ -1.27
SPTLC1P3-201ENST00000403408 MT-ND6P03923 174 aa7.13□□□□□ -1.27
SPTLC1P3-201ENST00000403408 SYCNQ0VAF6 134 aa7.13□□□□□ -1.27
SPTLC1P3-201ENST00000403408 FER1L6-AS1Q8NA97 138 aa7.13□□□□□ -1.27
SPTLC1P3-201ENST00000403408 GATD1Q8NB37 220 aa7.13□□□□□ -1.27
SPTLC1P3-201ENST00000403408 MED28Q9H204 178 aa7.13□□□□□ -1.27
SPTLC1P3-201ENST00000403408 CYTL1Q9NRR1 136 aa7.13□□□□□ -1.27
SPTLC1P3-201ENST00000403408 LINC00959A0A1B0GUT2 108 aa7.12□□□□□ -1.27
SPTLC1P3-201ENST00000403408 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.12□□□□□ -1.27
SPTLC1P3-201ENST00000403408 CCL25O15444 150 aa7.12□□□□□ -1.27
SPTLC1P3-201ENST00000403408 IGLV7-43P04211 117 aa7.12□□□□□ -1.27
SPTLC1P3-201ENST00000403408 FGF6P10767 208 aa7.12□□□□□ -1.27
SPTLC1P3-201ENST00000403408 MEF2BQ02080 365 aaPredicted RBP7.12□□□□□ -1.27
SPTLC1P3-201ENST00000403408 AKR1C8PQ5T2L2 129 aa7.12□□□□□ -1.27
SPTLC1P3-201ENST00000403408 LINC00299Q6ZSB3 139 aa7.12□□□□□ -1.27
SPTLC1P3-201ENST00000403408 S100ZQ8WXG8 99 aa7.12□□□□□ -1.27
SPTLC1P3-201ENST00000403408 RPL39LQ96EH5 51 aaKnown RBP7.12□□□□□ -1.27
SPTLC1P3-201ENST00000403408 A0A1B0GV50 99 aa7.11□□□□□ -1.27
SPTLC1P3-201ENST00000403408 C19orf71A6NCJ1 209 aa7.11□□□□□ -1.27
SPTLC1P3-201ENST00000403408 G3V3Q6 166 aa7.11□□□□□ -1.27
SPTLC1P3-201ENST00000403408 H0Y9J4 135 aa7.11□□□□□ -1.27
SPTLC1P3-201ENST00000403408 RNASEKQ6P5S7 137 aaKnown RBP7.11□□□□□ -1.27
SPTLC1P3-201ENST00000403408 OR5A1Q8NGJ0 315 aa7.11□□□□□ -1.27
SPTLC1P3-201ENST00000403408 IGLV4-69A0A075B6H9 119 aa7.1□□□□□ -1.27
SPTLC1P3-201ENST00000403408 LOC107984640A0A0U1RRK4 108 aa7.1□□□□□ -1.27
SPTLC1P3-201ENST00000403408 S100A9P06702 114 aaKnown RBP7.1□□□□□ -1.27
SPTLC1P3-201ENST00000403408 CAMPP49913 170 aa7.1□□□□□ -1.27
SPTLC1P3-201ENST00000403408 AMMECR1LQ6DCA0 310 aa7.1□□□□□ -1.27
SPTLC1P3-201ENST00000403408 LYZL1Q6UWQ5 148 aa7.1□□□□□ -1.27
SPTLC1P3-201ENST00000403408 TMUB2Q71RG4 321 aa7.1□□□□□ -1.27
SPTLC1P3-201ENST00000403408 NUP35Q8NFH5 326 aa7.1□□□□□ -1.27
SPTLC1P3-201ENST00000403408 DIRC1Q969H9 104 aa7.1□□□□□ -1.27
SPTLC1P3-201ENST00000403408 BORCS7-ASMTA0A0B4J1R7 106 aa7.09□□□□□ -1.27
SPTLC1P3-201ENST00000403408 H2AFB1P0C5Y9 115 aa7.09□□□□□ -1.27
SPTLC1P3-201ENST00000403408 RPL35P42766 123 aaKnown RBP7.09□□□□□ -1.27
SPTLC1P3-201ENST00000403408 FOXA3P55318 350 aaPredicted RBP7.09□□□□□ -1.27
SPTLC1P3-201ENST00000403408 OR2D3Q8NGH3 330 aa7.09□□□□□ -1.27
SPTLC1P3-201ENST00000403408 IGLV1-50A0A075B6I6 118 aa7.08□□□□□ -1.28
SPTLC1P3-201ENST00000403408 FAM168BA1KXE4 195 aa7.08□□□□□ -1.28
SPTLC1P3-201ENST00000403408 KRTAP7-1Q8IUC3 87 aa7.08□□□□□ -1.28
SPTLC1P3-201ENST00000403408 MBD3L1Q8WWY6 194 aa7.08□□□□□ -1.28
SPTLC1P3-201ENST00000403408 OPRPNQ99935 248 aaPredicted RBP7.08□□□□□ -1.28
SPTLC1P3-201ENST00000403408 FXYD6-FXYD2A0A087WZ82 144 aa7.07□□□□□ -1.28
SPTLC1P3-201ENST00000403408 A6NJY4 79 aa7.07□□□□□ -1.28
SPTLC1P3-201ENST00000403408 ZNF561-AS1K7EIQ3 104 aa7.07□□□□□ -1.28
SPTLC1P3-201ENST00000403408 ESDP10768 282 aa7.07□□□□□ -1.28
SPTLC1P3-201ENST00000403408 CD164L2Q6UWJ8 174 aa7.07□□□□□ -1.28
SPTLC1P3-201ENST00000403408 NDUFA13Q9P0J0 144 aa7.07□□□□□ -1.28
SPTLC1P3-201ENST00000403408 PKIGQ9Y2B9 76 aa7.07□□□□□ -1.28
SPTLC1P3-201ENST00000403408 H7C423 109 aa7.06□□□□□ -1.28
SPTLC1P3-201ENST00000403408 APOMO95445 188 aa7.06□□□□□ -1.28
SPTLC1P3-201ENST00000403408 NCR2O95944 276 aa7.06□□□□□ -1.28
SPTLC1P3-201ENST00000403408 APCSP02743 223 aa7.06□□□□□ -1.28
SPTLC1P3-201ENST00000403408 CENPWQ5EE01 88 aa7.06□□□□□ -1.28
SPTLC1P3-201ENST00000403408 SFT2D1Q8WV19 159 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms